Ctenopharyngodon idella (grass carp): 127519097
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Entry
127519097 CDS
T08802
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127519097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127519097
04121 Ubiquitin system [BR:
cide04121
]
127519097
03036 Chromosome and associated proteins [BR:
cide03036
]
127519097
03400 DNA repair and recombination proteins [BR:
cide03400
]
127519097
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
127519097
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127519097
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127519097
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
127519097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
BRCT_2
BRCT
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
127519097
NCBI-ProteinID:
XP_051762510
LinkDB
All DBs
Position
9:8947548..8980474
Genome browser
AA seq
727 aa
AA seq
DB search
MVCFSFKTKAARASWFCFNTPKTSFLSIQSHFSMILQLISQERGAMATDAIQSEGSSVSK
NKKNVKIWFSPKSRKIRCCIEKPAGSNKSNGVQGKEATSSKPKDLSVFNFTSSSQESGSS
SPPLRKANKKTKKKRSSQVYRQASGGQSLTTRTQTMQECKRLKLEAINQQWTLGKQAAID
KNDEEHEKVSSGDDDRRSRKRVSFLFPRSQPEETHKAPHQGENQIPSPKKSILSNMEIED
SEKQSCATLSSSYHDQQVEPVTDIPPESNENAPGPSQPSLPSVGKRTRENQDSQGLQSMP
KKPRNSGCGNRLSREGTSSTEDHSQRTSRQSNGKQNVKPITPATSDLRRKSSSVRHNQTS
PSFMKRNHNGETPLHLAAIKGDVEEVRKLLALGADPNLKDNAGWTPLHEACNLGHLGVVE
ELLQQGALLNTPGYQNDSPLHDAVRNGHIAVVKLLVERGASQSVLNMLGLRPVDYALTPE
MQEVLRMAPEAPHPLTTTLRPPASLSKAVGYVRETGPVVLIGSQLTQTQQKQLLKAAQLL
GGKQVKSFSSAVTHMVVPDVPIMPSTLTTLQGVLNGCWMLRFSWVSCSLQAGSWVGESEY
EAGDGPLRARANRDSLLPPLFDGCFFYMLGSFLKPPKHELLQLVKAGGGQLLNRQPKPDS
DVTQTLSAAAYHAQPGSDQILCTQYILYDPQSSYKPQRVRLGKVWSAPSTWLLDCIAAFQ
LLPVPEP
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggtatgctttagcttcaaaacgaaagcagctcgggcatcctggttctgttttaacacg
ccaaaaacttcgtttctgtcaattcaaagtcattttagcatgattttgcagctcatctct
caggagagaggcgccatggccactgatgccatacaatcagaagggagctctgtctctaag
aataagaagaacgtcaagatatggtttagcccaaaaagtcgcaaaatacgttgctgtatc
gagaaacccgctggatcaaacaaatcaaatggagtccagggaaaggaagccacttcgtcc
aaacctaaggacctgtctgtcttcaacttcacctcttcctcccaggaatctggctcgtcc
agccctccattgcggaaggcaaataagaaaacaaagaaaaaaaggagcagccaagtctac
agacaagccagcggtggtcaaagcctcacaacacggactcaaactatgcaggaatgtaag
aggctgaagctagaggctatcaatcagcagtggaccttaggaaaacaagctgctatagac
aagaacgatgaagagcatgagaaagtgagctctggagatgacgacaggaggtccagaaag
agagtttctttccttttccctcgcagccagcctgaggagactcataaggctcctcaccaa
ggagagaatcaaattcccagtcccaaaaaaagcatcctaagcaatatggaaattgaagac
agtgaaaagcaaagctgtgcaactttgagttcatcgtatcatgatcaacaggttgagcct
gtcactgatatcccaccagaatcaaatgaaaatgctccagggccttctcagccttccctt
cccagtgttggtaagagaacaagagagaatcaggacagtcaaggtctgcagagtatgcca
aaaaaacccagaaattcaggatgtgggaataggttatctagagaaggaacttcttcaact
gaagaccactctcagaggacatccagacagtccaatgggaagcagaatgtgaagccaatc
acaccagctacctctgaccttaggaggaagtcttccagtgtgagacacaatcagacaagt
ccctctttcatgaagaggaaccacaatggagagacgccactgcacttagctgccataaag
ggtgatgtggaggaggtccgtaagctccttgctctgggagctgaccccaacttgaaggac
aatgcaggctggacaccattgcacgaggcttgtaatctcggtcatctgggagtggtggag
gaactgcttcagcagggggcgctgttgaacacaccaggctatcagaacgactctccactg
catgatgccgtgaggaacggccatatagcggtggtcaagctcttggttgaacgaggcgct
tcccaaagtgttctgaatatgcttggcctgcggccagtggattatgcactgactccagaa
atgcaggaggtcttaagaatggccccagaggcaccgcatcctttaacaaccaccctgagg
ccccccgccagcctcagtaaggctgtaggctatgtgcgggagacgggtccagtggttttg
attggcagtcagctgacgcagactcagcagaagcagctcctcaaagcagctcaactcctt
ggtggaaaacaagtaaagtccttttcaagtgcagtcacccatatggttgtaccagatgtt
cccatcatgccctctaccctgaccacactgcagggcgtcctcaacggctgttggatgctc
cgtttcagctgggtgagttgtagccttcaggcaggcagctgggtcggggagagcgagtac
gaggcaggtgacggccccctgcgtgcccgtgcgaacagagacagcctgctgcctccactc
tttgatggctgcttcttctacatgctgggctccttcctcaagccgcctaaacatgagctc
cttcagttagtgaaagcaggaggaggtcagcttctgaatcgccagcccaagcccgacagt
gacgtcacgcaaaccctgagcgcagcggcctaccacgcccagcctggttcagaccagatt
ctctgcacccagtacatcttgtatgatcctcagagctcctacaaaccccagagggtccgg
ttaggtaaggtgtggtcagctccatccacatggcttctggactgcatagctgcctttcag
ctcctgcctgtgccggagccctag
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integrated database retrieval system
