Ctenopharyngodon idella (grass carp): 127519116
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Entry
127519116 CDS
T08802
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127519116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cide04050
]
127519116
Cytokine receptors [BR:
cide04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
127519116
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Motif
Pfam:
Death_EDAR
TNFR_c6
Chordopox_G3
Psg1
Motif
Other DBs
NCBI-GeneID:
127519116
NCBI-ProteinID:
XP_051762542
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All DBs
Position
9:1608095..1709359
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AA seq
463 aa
AA seq
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MGRKGGRTQSCLLPLLLVFSMCFASAEYSSCGENEFYNHTVSSCQPCPQCQPGQEPYMNC
GYGTKDDDYNCVACPAGKFSKGKYEICRRHKDCDSLYRATVLTPGTLESDAECGPCLPGY
YILENRPRNIYGMVCHSCQNAPRNIKECMRSTPPSAGQAPSVSSSSTTVFQQPEKDPTGQ
GHLATALIIAMSTIFIMAIAIVMIIMFYILKAKPSGQACCSGQIIKTVEAQTNKQEEKKE
VQESVVIFAEKDEFDKLKPSSPKTAKSENDASSENEQLLSRSIDSDEEAAQDKQGAADLC
LLSLVHLTRDKTCSTNTVNNNNNCSRATGIHSRRKKILDLYSKACSVAEGLSPTELPFDC
LERTSRMLSATYSTDKAVVKTWRHLAESFGLKRDEIGGMSDGMQLFDRISTAGYSIPDLL
TRLVQIERLDAVETLCFDILGGPENSVPPSSHHPTLTSRCASV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggccggaaaggaggacggacacaatcatgcctcctgcctcttctgctggtgttcagc
atgtgttttgcgagtgccgagtactcgagctgtggagaaaatgagttttacaatcataca
gtcagcagttgccagccctgcccacagtgccaaccaggacaagagccgtacatgaactgt
ggttatggcactaaggatgatgactataactgcgtggcgtgtcccgcagggaagttctcc
aaaggcaagtatgaaatctgccggcgacacaaagactgcgactccctgtaccgggccacc
gtgttgacgccggggactttagagagcgacgctgagtgcggaccgtgtttaccagggtac
tacattctggaaaacaggccgcgtaacatctacggcatggtgtgtcattcctgtcaaaac
gctccacgcaacatcaaagagtgcatgcgatccacaccgccgtcagccggtcaagctccc
agtgtctcgtccagcagcacaactgtatttcagcagccggagaaagatccaacaggacaa
ggtcatctagcaacagccctcatcatcgccatgtcaaccatcttcatcatggcaatcgct
atagtgatgatcattatgttctacatcctgaaggccaaaccgagtggacaagcatgctgc
tctggacaaataataaagactgtggaagcccaaacaaacaagcaggaggagaagaaagag
gttcaagagagcgtggtgatctttgcagagaaggatgaatttgataagctcaaaccttca
tctccaaaaacagcaaagagcgagaacgacgcgtcgtcagagaacgagcagctcttgagt
cgcagcatcgacagtgacgaggaagcagcgcaggacaagcagggagccgctgacctttgc
cttctgtccctggtgcatctgacccgagacaaaacctgctccaccaacaccgtcaacaac
aacaacaactgcagcagagccaccggcattcacagcagaaggaaaaagatcctggacttg
tactcaaaagcctgcagtgttgcggagggtctgagtccgaccgagctgccgttcgactgt
ctggagcgcaccagccgcatgctcagtgccacctacagcacagacaaggccgtggtcaag
acgtggcggcacctcgccgagagcttcgggctgaagcgcgacgagatcggcggcatgagc
gacggcatgcagctcttcgaccggatcagtacggcgggttacagcatcccagacctcctg
acccgtctggtccagatcgagcggctggacgcggtggagaccctctgcttcgacattctg
ggcggcccggagaacagcgtccctccatccagccaccatccgaccctgacgtcccgctgc
gccagcgtctga
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