KEGG   Ctenopharyngodon idella (grass carp): 127519122
Entry
127519122         CDS       T08802                                 
Name
(RefSeq) transcription factor Sox-1a
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cide03000]
    127519122
Transcription factors [BR:cide03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    127519122
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 127519122
NCBI-ProteinID: XP_051762549
LinkDB
Position
9:10900378..10993979
AA seq 336 aa
MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGVGMSPGGVGQRLESPGGHGGSASAGYAHMNGWANGTYSGQVAAAAA
AAAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMTALQYSPISNSQSYMSASP
SGYGGITYTQHQNSSVATSAAIGTLSSLVKSEPNISPPVTTHSRGPCPGDLREMISMYLP
TGESGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgtatagcatgatgatggagacggaccttcattcccctggaccccaaaccaacacgaat
ccggggcaaacgggtccaaattcggggagcaaagccaaccaagaccgcgtaaaaagaccc
atgaacgcttttatggtctggtcccggggccagcgccgaaaaatggctcaggagaacccc
aaaatgcacaactctgaaattagcaaaagactcggtgctgagtggaaagtgatgtcagag
gctgaaaagcggccctttattgatgaggcgaagcggttgcgagccatgcacatgaaagag
catccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaag
tactcgttggctggcggcttgctcggcggtgcgggtggcggggtcggaatgagtcctgga
ggggtcggccagaggttggagagtcctgggggtcacggaggctcggccagcgctggctac
gcgcacatgaacggctgggcgaacggcacttactccggccaggtggccgccgcggcggca
gcggctgcgatgatgcaggaggctcagctcgcttacagccagcacccaggtagtgggtct
caccatcaccacgctcatcaccatcacccgcacaaccctcagcccatgcaccgctacgat
atgactgctcttcagtacagccccatctcgaactcccagagctacatgagcgcttctccg
tccggctacggtgggataacatacacgcagcatcaaaattccagcgtcgccacttctgcg
gccatcggcacgctgagctcgctcgtcaagtccgaacccaatataagccctccggttacc
acacactcccgaggcccctgccccggagacttgagagagatgataagcatgtatttaccg
accggggaatccggggatccgtctgtgcagagcagactgcatgccttaccgcagcactat
cagagcacaactgccggagtaaacggaactgtcccattgacgcatatttga

DBGET integrated database retrieval system