Entry |
|
Name |
(RefSeq) transcription factor Sox-1a
|
KO |
K09267 | transcription factor SOX1/3/14/21 (SOX group B) |
|
Organism |
cide Ctenopharyngodon idella (grass carp)
|
Brite |
KEGG Orthology (KO) [BR:cide00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:cide03000]
127519122
Transcription factors [BR:cide03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127519122
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
9:10900378..10993979
|
AA seq |
336 aa
MYSMMMETDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLGGAGGGVGMSPGGVGQRLESPGGHGGSASAGYAHMNGWANGTYSGQVAAAAA
AAAMMQEAQLAYSQHPGSGSHHHHAHHHHPHNPQPMHRYDMTALQYSPISNSQSYMSASP
SGYGGITYTQHQNSSVATSAAIGTLSSLVKSEPNISPPVTTHSRGPCPGDLREMISMYLP
TGESGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI |
NT seq |
1011 nt +upstreamnt +downstreamnt
atgtatagcatgatgatggagacggaccttcattcccctggaccccaaaccaacacgaat
ccggggcaaacgggtccaaattcggggagcaaagccaaccaagaccgcgtaaaaagaccc
atgaacgcttttatggtctggtcccggggccagcgccgaaaaatggctcaggagaacccc
aaaatgcacaactctgaaattagcaaaagactcggtgctgagtggaaagtgatgtcagag
gctgaaaagcggccctttattgatgaggcgaagcggttgcgagccatgcacatgaaagag
catccggattacaaatacagaccgaggcgcaaaaccaagaccctgcttaaaaaggacaag
tactcgttggctggcggcttgctcggcggtgcgggtggcggggtcggaatgagtcctgga
ggggtcggccagaggttggagagtcctgggggtcacggaggctcggccagcgctggctac
gcgcacatgaacggctgggcgaacggcacttactccggccaggtggccgccgcggcggca
gcggctgcgatgatgcaggaggctcagctcgcttacagccagcacccaggtagtgggtct
caccatcaccacgctcatcaccatcacccgcacaaccctcagcccatgcaccgctacgat
atgactgctcttcagtacagccccatctcgaactcccagagctacatgagcgcttctccg
tccggctacggtgggataacatacacgcagcatcaaaattccagcgtcgccacttctgcg
gccatcggcacgctgagctcgctcgtcaagtccgaacccaatataagccctccggttacc
acacactcccgaggcccctgccccggagacttgagagagatgataagcatgtatttaccg
accggggaatccggggatccgtctgtgcagagcagactgcatgccttaccgcagcactat
cagagcacaactgccggagtaaacggaactgtcccattgacgcatatttga |