Ctenopharyngodon idella (grass carp): 127519195
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Entry
127519195 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: high affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127519195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127519195
Transporters [BR:
cide02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
127519195
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
127519195
NCBI-ProteinID:
XP_051762698
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Position
9:37448370..37458915
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AA seq
590 aa
AA seq
DB search
MMAIHVEGLLAIIIFYLLILAVGIWAAWKNKNSGISAGTDRSESIMVGGRDIGLFVGGFT
MTATWVGGGYINGTAESVYLPGSGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDP
FQQLYGKRMGGLLFIPALLGEMFWSAAILSALGATLSVIVDININMSVMISALIAVFYTL
VGGLYSVAYTDVVQLFCIFLGLWISVPFALSSPAVSDISVTAVTAVFQPPWLGEIDPSDG
WIWADNFCLLMLGGIPWQVYFQRVLSASSASYAQFLSFLAAFGCLVMAVPSVLIGAIGAS
TDWNQTSYGPIPPVEKDESDMILPIVLQHLCPSFVSFFGLGAVSAAVMSSADSSILSASS
MFARNIYQLAFRQSASDREIVWVMRITIFVFGALATTMALLTGSVYGLWYLSSDLVYVII
FPQLLCVLFVKGTNTYGSVAGYVFGLLLRVGGGEPYLRLPPFIYYPGWQPREKQHRLTQE
VERYVEQRFPYKTVSMLASLLSNVAFSYLAKYLFESGTLSPKYDFLDAVVSKHSKETMDK
TTLVTHDNILLSELAAVKPRHGSSLAGTFINTDVLMDEDTVSPDANNQHL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatggccatccatgtggaaggactgctggccatcatcatcttctacctgctcatctta
gctgtcgggatctgggcggcctggaagaacaagaactctgggatctcagcaggaacagac
cgcagcgaatccatcatggtcggaggaagagacatcggcctgttcgtgggaggattcacg
atgaccgccacgtgggtcggcggcggctacatcaacggcacggcggagtccgtgtatctt
cccggctctggcttggcttgggctcaggctccgttcggatacgctctcagtctggtcgtg
ggcgggctgttcttcgccaagcccatgcgctcccgaggatacgtgaccatgctggacccg
ttccagcagctgtacgggaagaggatgggcggcctgctcttcatccctgctctactggga
gagatgttctggtccgcggccatcctgtcagccctgggtgcgacgctcagcgtgatcgta
gacatcaacatcaacatgtcggtcatgatctcggccctgatcgcggtcttctacacgctg
gtgggaggactgtactctgtggcgtacaccgatgtcgtccagctcttctgcatttttcta
ggtttgtggatcagtgtgccgttcgctctgtccagtcctgctgtgtccgacatcagtgtg
accgccgtcaccgcagtgtttcagcctccgtggctgggcgagatcgacccgtccgacggc
tggatatgggccgataacttctgccttctcatgctgggtgggatcccgtggcaggtgtat
ttccagcgggttctctcggcctcctcggctagttatgctcaattcctgtcgttcctggcc
gctttcggctgtctcgtcatggccgtcccttccgtcctgatcggagccatcggagcctcc
acagactggaaccagacgtcgtacggaccgattcctccggtggagaaggacgagtcggac
atgattctgcccatcgtgctccagcacctctgcccgtctttcgtctctttcttcggtctg
ggcgccgtctccgccgcggtcatgtcgtccgccgactcctccatcctctccgctagttcc
atgttcgcacggaatatttaccagctcgctttccgtcagtcggcgtcggaccgagagatc
gtgtgggtgatgaggatcaccatctttgtgttcggagcgctggccaccactatggccctg
ctgacgggctcagtgtacggcctgtggtacctgagctcagacctggtgtacgtcatcatc
ttccctcagctgctctgcgtgctgttcgtcaagggcaccaacacctacgggtctgtggcc
gggtacgtcttcggcctgctgctgcgggtcggcggaggggagccgtacctccggctgcct
ccgttcatctactatcccggctggcagccgcgggagaagcagcaccgtctgacgcaggag
gtggagcgatacgtggagcagaggttcccctacaagacggtttccatgctcgcttcgctt
ctgagcaacgtcgccttctcctatctggccaaatatctgtttgaaagtggcactctctca
cccaagtatgacttcctggacgcggtggtttccaaacacagcaaggagacgatggacaag
acgacgctcgtcacccacgacaacatccttctgtcagaactggccgctgtgaagccgagg
cacggaagctctcttgcgggaacgttcataaacacggacgtcctgatggacgaggacacc
gtcagcccagacgccaacaatcagcacctgtag
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