Ctenopharyngodon idella (grass carp): 127519233
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Entry
127519233 CDS
T08802
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127519233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127519233
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127519233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_IP5PC_F
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_HPS5
WD40_RFWD3
WD40_MABP1-WDR62_2nd
DUF1623
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
127519233
NCBI-ProteinID:
XP_051762767
LinkDB
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Position
9:8687400..8708491
Genome browser
AA seq
837 aa
AA seq
DB search
MFREAENMVEKSDIRVVRCGGSKMNLRPPIISNDSRFVLCASGDLVKVYSTRTEEWLNSL
QGHTNQVTGIAFNPANHLQVYSCSADGTVKLWDFIDGILIKTFIIGYPLFSLYVSDKHEG
VIFLHLPMATDSMNESFQLVSAHLPKSAEQEVEVKELSVVCSYISPNPSCTAFGQGGEYV
AFAVHLQLNVYFFRKQKTYSFFLQATDKKGAKNAFTCLACHPTDDCIATGHEDGKIRFWR
NFHQKKEYTYSTLHWHHNAVNTLCFTPEGTNLLSGGIESVLVQWQYGANNKKEFLPRLGG
SILHVSASSDGQLFCTSHSDNKITVIESSFKVSGVIQGLVKGDAVMIDPRSKALVLNGKP
GHLQFYSLLRDKHLYNLAIVEQEYIYEAGLDQFEVVKAAFDVKGSWLATVEERGQKSSEL
EFFLKLWAFDETTQSFVLNTTITAAHMDRIISMCFSSSEETTMLVTTAEDGQFKAWCQDA
DEDTQQDQNFWSCDFVGSYHNLKPKNCSFSADSSLLAVSFQEVITIWSPDTWELLTTLCQ
PPGEIRDLCFGRLSCSKYLLGTTTNNLLCCWNLLTCALEWSTSLEVSKLQPDPLSENVAA
FSYQSKHTDLFVFKPSEPRPLFTQKKVCSEKVHRAIFVPREEPLNKCDESSQWLNRSQLY
FLTQNTDLLTFSIATEEDRMLSSSKRLVIDDSVAVTPFYLLLGKHRQQQQKLDTPSHAAA
EKPKHTQGSVTIKELLHTPAHVLPAASVLCSMFVGSLLISNTGVREERESSEQEMDSEKE
EDDSEGEMETRDSQQELRAQGSVDEVTPKLSKAQERELKKVRKTDFSWMAGLIDSKP
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagaggctgaaaacatggtggagaagagtgacatccgcgtggttcgctgcggc
ggcagtaaaatgaaccttagacctccgatcatctcaaatgactccaggtttgtgttgtgc
gcctctggggatttagtgaaggtctatagcacacgtacagaagagtggctcaatagtctg
cagggccacaccaaccaagttacaggcatcgccttcaatcctgccaatcacctgcaggtt
tactcttgctcagcagatggcactgttaaattatgggacttcattgacggcatccttatc
aagacatttatcattggatacccattgttttcactatatgtgtccgataaacatgaggga
gtcattttccttcatcttcccatggctacagattccatgaatgagagtttccagttggtt
tccgcacatctgcccaagtcagcagagcaggaggtggaggttaaagagctatctgtcgtt
tgcagttatatcagcccaaaccccagctgcacggccttcggtcaagggggggaatacgta
gcatttgccgtgcacctccaacttaatgtttatttcttcaggaagcagaagacatacagt
ttttttctacaagccacagataaaaaaggagccaaaaatgcattcacgtgcttagcctgt
cacccaacagacgactgtatcgccaccggtcatgaagatggaaagattcgcttctggaga
aacttccatcaaaaaaaggagtatacatattccacgctgcactggcatcacaatgctgtg
aacactttgtgttttactccagaaggcactaatctgctgagtggaggcattgagtcagtg
cttgtccagtggcagtatggggcaaacaacaaaaaagagttcttgccacgtctcggagga
tccattttacatgtatctgcatcatctgatgggcagttgttttgcacctcccattcagac
aacaagatcacagttatcgagagcagcttcaaagtgtctggagtgattcagggtttagtc
aaaggagacgccgtaatgattgatccgcgcagtaaagctttagtgctgaatgggaaaccg
ggtcatctgcagttctactccctgctacgtgacaagcatctctacaatctggccatagtg
gagcaagaatatatttatgaagcgggtctggatcagtttgaagtggtaaaggctgccttt
gatgtaaaagggtcctggcttgctacagtggaggaaaggggacaaaaatcctcagaattg
gagttttttctcaaactgtgggcttttgatgagacaacgcaaagcttcgtactgaacact
accatcactgccgcccacatggatcggattatatccatgtgcttcagctcttctgaggag
accaccatgctggtgaccacagcagaagacggccagttcaaagcatggtgtcaggatgct
gacgaagacacacaacaggaccagaacttctggtcgtgtgattttgtgggaagctaccat
aacttaaagcccaaaaactgcagtttctcagccgatagctctctcctggcggtgagcttc
caagaagtcatcaccatatggagcccggacacctgggagctgctcaccaccctctgccag
ccacctggagaaataagggacctttgtttcggccgattaagctgctccaaatacctgctt
ggcaccaccaccaacaaccttctctgctgctggaatctcctcacttgtgcattggaatgg
agcacatctttggaagtttccaagctgcagccagaccccttgtcagaaaatgtggctgcc
ttttcataccagtctaaacatacagacctgtttgttttcaaacccagcgaaccacggcct
ctgttcacccagaagaaagtgtgttcagagaaagtacatcgtgccatctttgttcctcga
gaggagccgttgaacaaatgtgacgaaagttctcagtggctcaacagatctcagctgtat
ttcctcacccaaaacacggatttattgaccttcagcattgcaacagaggaggacagaatg
ttgtcatcaagtaaacggcttgtcattgatgacagcgttgctgttacgccattttacctg
ctgttgggcaaacaccgacagcagcagcagaaactcgacacaccatcccacgcagcggct
gaaaaacccaaacacacacagggctctgttaccatcaaagaattattacacacaccagct
catgttctacctgctgcttcagtcctgtgctcaatgtttgtcggttccctcctgatctcc
aacactggagtccgagaggaaagggagtcttcagagcaggaaatggacagtgaaaaagag
gaagatgactctgagggggaaatggagacacgtgatagtcagcaggagctcagagcccag
ggttcagttgatgaggtgacgccgaagctttctaaagcacaagagagggaactgaagaag
gtcagaaagactgactttagctggatggctggcctcattgactccaaaccgtga
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