Ctenopharyngodon idella (grass carp): 127519336
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Entry
127519336 CDS
T08802
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127519336
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127519336
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127519336
NCBI-ProteinID:
XP_051762932
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Position
9:225564..227444
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AA seq
247 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPMAYNLGEHEALKVGGLPSGALSESL
MSNPDKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMTELSPPSFPYASPLGYPTAATA
FSGAGSVGTGAHAHTHSHPSPGNPGYMIPCNCAAWPSAGLQPPLAYILLPGMGKPPLEPY
PAYAAAL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcccatggatcacgttaagcgtcccatgaacgcgttcatggtgtggtcccga
gcgcagcggcggaaaatggcccaagagaacccgaaaatgcataattccgagatcagcaag
cgactcggagcggagtggaaacttctgacggagtccgagaagaggccgttcattgacgag
gcgaagcgactgcgggcgatgcacatgaaggaacaccctgactacaaatacagacccagg
cgaaagcccaagactttaatgaagaaggacaaattcgccttcccgatggcgtataatctg
ggagagcacgaggcgctgaaagtgggcggcttgccgagcggagcgctctccgagtctctg
atgagcaacccggacaaggcagcggcggcggcggcggcagcggcggcccgggtgttcttc
aacccttccatgtccgcgaacccctattcgttttttgaccttggctcaaaaatgaccgaa
ctttccccaccatcgttcccctacgcctcaccgctgggttacccgacagcggcgacggct
ttctccggagcgggctctgtcggcaccggggcacatgcccacacgcactcgcacccatcg
ccgggtaacccgggctacatgatcccgtgtaactgcgcggcttggccgtctgcggggctt
cagccccctcttgcctacattttactacctggaatgggaaaaccaccacttgaaccgtat
cccgcgtacgcagcggcgttatga
DBGET
integrated database retrieval system
