Ctenopharyngodon idella (grass carp): 127519338
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Entry
127519338 CDS
T08802
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
cide04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127519338 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127519338 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127519338 (zgc:136908)
03009 Ribosome biogenesis [BR:
cide03009
]
127519338 (zgc:136908)
04131 Membrane trafficking [BR:
cide04131
]
127519338 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127519338 (zgc:136908)
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127519338 (zgc:136908)
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127519338 (zgc:136908)
Membrane trafficking [BR:
cide04131
]
SNARE
SNARE associated proteins
Others
127519338 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127519338 (zgc:136908)
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127519338 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_33
AAA_22
AAA_2
TIP49
Vps4_C
RNA_helicase
AAA_28
NPHP3_N
AAA_14
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
AAA_18
ATPase_2
IstB_IS21
ATPase
AAA_7
ABC_tran
DUF815
AAA_24
Sigma54_activat
ResIII
Viral_helicase1
TsaE
NACHT
NB-ARC
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
127519338
NCBI-ProteinID:
XP_051762938
LinkDB
All DBs
Position
1:complement(43305735..43325014)
Genome browser
AA seq
805 aa
AA seq
DB search
MPAAGASDPKSEDFSTAILKQKIRPNRLVVDEATNEDNSIVCLSQVKMEELQMFRGDTVV
LRGRKRKQTVCIVLTDDTCSNERVRMNRVTRNNLRVRLGDVISIHACPDVKYGKRVHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVIETDPSPHCIVAP
DTIIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRVHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQIATETHGHVGADMAALCSEA
ALQAIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETLVEVPQVNWED
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMASRSAILR
ANLRKSPVAKDVDLAYLSRITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQTRKE
TAMDDDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPAAAQ
SGGGQGSGQGSGGHFRNDGDDDLYQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgctggagcctcagatccgaagtcggaggatttctccactgctattctgaag
cagaagattcgaccgaatcgactcgttgtggatgaagccaccaatgaggacaacagtatt
gtgtgcttgtcacaggttaaaatggaggagctgcagatgttccgcggagacaccgtggtg
ttgcgtggtcggaaacgaaaacagacggtctgcattgttctcacagacgacacgtgtagc
aatgagcgcgtgcgcatgaacagggtcacccgcaacaacctgcgtgtgcgtctcggtgat
gtcatcagtatccacgcctgtccagatgtgaaatatgggaagcgcgtccatgttctaccc
attgatgacactattgaggggctgacgggcaacctgttcgatgtttttctgaagccgtat
tttctggaggcctaccgacctgttcacaaaggtgatattttcctggtcagaggaggcatg
agagcagtggagtttaaagtgatagaaaccgacccctccccacactgcattgttgcccca
gatactattatccactgtgagggagaaccaatcaaacgagaggatgaggaggagagtctg
aatgacatcgggtatgatgacatcgggggttgtcgtaaacagctggctcagatcaaagag
atggtggagctgcctctcagacaccccggcctgttcaaagccatcggagtgaagcctccg
agggggattctgctgtacggcccacccggcacgggcaagacgctggtggctcgtgctgta
gccaatgagacgggagctttcttctttcttatcaatggtcctgaaatcatgagcaaactg
gcaggggagtctgagagcaacctaagaaaagctttcgaagaggctgaaaaaaacgcccct
gctatcatcttcatcgatgagctggatgcaatcgctccgaaacgagagaagactcacggt
gaggttgagcggaggatcgtctctcagctgctcaccttgatggacggcctgaaacaacgc
gttcatgttgtggtcatggcggccacaaacagaccgaacagcgtggatcccgctcttcgg
cgttttggtcgttttgatcgagagattgacattggcatccctgattccaccggaaggctg
gagattttacagattcacaccaagaacatgaaactatcagaagatgtggacctggagcag
atcgccacggaaacacatgggcacgtgggagcagatatggccgctctgtgttcagaggca
gcgctgcaggccatccgcaaaaagatgaccttaattgatctggaggacgacagtatcgat
gcagaccttctcaactcactggccgtcaccatggatgacttcaaatgggctttaagtcag
agtaacccatctgccctgagggagacgttagtggaggttcctcaggtaaactgggaggac
attggaggacttgatgaggtgaagcgagagttacaggagcttgtgcagtatcctgtggag
tatcctgataaatttctgaagtttggcatgactccatctcgaggcgttctattctatggt
ccaccaggttgtggcaaaacccttctagctaaagccattgccaacgagtgccaggccaac
tttgtgtccattaaaggcccagagatgctcaccatgtggtttggtgaatcagaggcaaac
gtcagagatgtgtttgataaggcccggcaggcggctccgtgcattctgttctttgacgag
ctggactctattgctaaatcacgagggggcggagctggagatgcaggaggtgcggctgac
agggtcatcaaccagatcttgacagaaatggatgggatgagtgacaagaagaacgtcttt
atcattggcgccaccaacaggcctgatatcatagatcctgcaatcctgagacctggtcgc
ttggatcagctgatttacatccctctccctgacatggcctcccgctctgccatcctacgt
gccaacctccgcaagtctccagtcgctaaggacgtagacctggcgtatctgtcccggatt
acagagggtttctccggagcagacctgactgagatctgtcagagggcctgtaagcttgct
atcagagaagctatagaggcagagatccgtgctgagagacagcggcaaaccaggaaagag
actgctatggatgatgattatgacccggtgcctgagatcaggaaggatcattttgaggaa
gccatgagatttgctcgtcggtctgttagtgataatgacatacggaagtatgagatgttt
gctcagactcttcagcagagccgtggattcgggaacttcaggtttcctgcagcagctcag
tcaggtggaggtcaagggtcaggccaaggctctgggggtcatttcagaaatgatggagat
gatgatctctatcagtga
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