KEGG   Ctenopharyngodon idella (grass carp): 127519797
Entry
127519797         CDS       T08802                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127519797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127519797
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     127519797
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     127519797
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 127519797
NCBI-ProteinID: XP_051763350
LinkDB
Position
1:complement(42469224..42476140)
AA seq 194 aa
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctctgcagcacagaggattgtatc
cccggtaccggcacgtatctgcggcacggctacatcttcgcttcgctcgcgggatacgtg
ctgagaaagaacgagggagaggagctcccggtgatttcagtcgttagggagacagaagca
caacttttgcctgacgtcggtgccatcgtcacctgtaaggtgacgagtatcaacccacga
tttgctaaagtccacatcttatatgtggggtcaacgccactaaaagaccggttcagaggc
actatcagaaaagaagacgtgagagcgacagagaaagataaggtggagacgtacaaaagc
ttcaggccaggcgacattgtccttgcaaaagtgatctctttgggcgacgtgcagtccaac
tacctgctgaccacggcggagaacgagctgggcgtggtcgtggcccacagcgaggcgggg
gctcagatggtgcccatcagttggtgtgagatgcagtgtcctcggacgcacgccaaagag
tttcgcaaggtcgcgcgggtacagccggagtacctgcaggcctga

DBGET integrated database retrieval system