Entry |
|
Name |
(RefSeq) exosome complex component CSL4
|
KO |
K07573 | exosome complex component CSL4 |
|
Organism |
cide Ctenopharyngodon idella (grass carp)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cide00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127519797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cide03019]
127519797
Messenger RNA biogenesis [BR:cide03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127519797
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
127519797
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1:complement(42469224..42476140)
|
AA seq |
194 aa
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA |
NT seq |
585 nt +upstreamnt +downstreamnt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctctgcagcacagaggattgtatc
cccggtaccggcacgtatctgcggcacggctacatcttcgcttcgctcgcgggatacgtg
ctgagaaagaacgagggagaggagctcccggtgatttcagtcgttagggagacagaagca
caacttttgcctgacgtcggtgccatcgtcacctgtaaggtgacgagtatcaacccacga
tttgctaaagtccacatcttatatgtggggtcaacgccactaaaagaccggttcagaggc
actatcagaaaagaagacgtgagagcgacagagaaagataaggtggagacgtacaaaagc
ttcaggccaggcgacattgtccttgcaaaagtgatctctttgggcgacgtgcagtccaac
tacctgctgaccacggcggagaacgagctgggcgtggtcgtggcccacagcgaggcgggg
gctcagatggtgcccatcagttggtgtgagatgcagtgtcctcggacgcacgccaaagag
tttcgcaaggtcgcgcgggtacagccggagtacctgcaggcctga |