Ctenopharyngodon idella (grass carp): 127519797
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Entry
127519797 CDS
T08802
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127519797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127519797
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127519797
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
127519797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
127519797
NCBI-ProteinID:
XP_051763350
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All DBs
Position
1:complement(42469224..42476140)
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AA seq
194 aa
AA seq
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MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctctgcagcacagaggattgtatc
cccggtaccggcacgtatctgcggcacggctacatcttcgcttcgctcgcgggatacgtg
ctgagaaagaacgagggagaggagctcccggtgatttcagtcgttagggagacagaagca
caacttttgcctgacgtcggtgccatcgtcacctgtaaggtgacgagtatcaacccacga
tttgctaaagtccacatcttatatgtggggtcaacgccactaaaagaccggttcagaggc
actatcagaaaagaagacgtgagagcgacagagaaagataaggtggagacgtacaaaagc
ttcaggccaggcgacattgtccttgcaaaagtgatctctttgggcgacgtgcagtccaac
tacctgctgaccacggcggagaacgagctgggcgtggtcgtggcccacagcgaggcgggg
gctcagatggtgcccatcagttggtgtgagatgcagtgtcctcggacgcacgccaaagag
tttcgcaaggtcgcgcgggtacagccggagtacctgcaggcctga
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