Ctenopharyngodon idella (grass carp): 127519997
Help
Entry
127519997 CDS
T08802
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127519997
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127519997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
127519997
NCBI-ProteinID:
XP_051763655
LinkDB
All DBs
Position
10:complement(2968184..2992401)
Genome browser
AA seq
1013 aa
AA seq
DB search
MMAASNYYGFTHAAAAAAGPQYSTQPPPAYSHPTTGSYNVQPAPGVAHTVTASYPAATAQ
PARPAVTAPYPTYQPHPAPNYGYRQPETPPQPTTTPQTYQVLTEPENYTYGRPPSVSSYE
NKQYFQTSIAPAQRTATEAYFQTGVTDTIFAFSGLKSGYSPVSTVYSQPPVQRQVAALKP
PPTASSVSSSYTIYPTSTSVQQTPAPISTYTHSSSFNSTAATSYSAGLSYSSYESSGYTS
APSYFQPTQLAPPQAQPQPPLQQPQQPPPPPPQQQTQQPPKQLANSSWSNTAVTSPAVNA
YKKPIFHQNKIQKPKGPPKQPQLHYCDICKISCAGPQTYREHLEGQKHKKKEAAQKSGSQ
VTNGPRGVQTQLRCELCDVSCTGADAYAAHIRGSKHQKVVKLHTKLGKPIPSTDPVFVSS
ASAATTMTTSKTAATAAAPTPASVAQKTPVTAPSKPASTPVKKPTAAKVAIIGSRASTAA
PVKLEEVKPSVVKTDPSSDDEDGDCAGAQGDIQPVGHDYVEEVRNDDGKVIRFHCKLCEC
SFNDPNAKDMHLKGRRHRLQYKKKVNPDLPVEIKPSNRARKLLEVKLRKQKQKSVLKRQQ
EDEQRWHMEMRRYEEDMYWRRMEEEQLYWGEQRRRMAPPPLMGRPNMPVPPLLPVRRPDS
PDDRHIMAKHSAIYPVEEELQAVQRIVSHSERALKLVSDSLLEKEASAVDDADDDVTDKQ
SESQARVLKGVMRVGILAKGLLLRGDRNVQLILLAAKKPTVSLLRTVAEQLPKQLATFSE
DQYEVQVHPEEANIVIFSSKEPKMQVTISLTSPVMREDPVPNMEKASEKDPPDVLNRIKC
LEYLAALRHAKWFQARANGLQSCVIIIRVLRDLCQRVPTWGKMPDWAMELLVEKAISSAS
SPLSPGEALRRVLECIATGILLPDGPGLLDPCEKGQTDALGSMSKQAREDVTASAQHALR
LLAFRQIHKVLGMGSLPASKAGARNRKRRRDGSDAGEGEANEKKDKKDDSQDP
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccagtaattattatggattcacacatgcagctgctgctgccgccggcccg
cagtacagcacccagccgcctccagcatattcccacccaaccacgggcagctataacgtc
cagcccgcccccggagttgcccatacggtgacggcctcgtaccctgcggccaccgcccaa
ccagcacgtcccgcagtgacagccccctaccccacctaccagccccatcctgcccccaac
tacggctaccgccagcccgaaacgcccccgcagccgacaaccacccctcaaacctaccag
gtgttgactgaaccggagaattatacttacggccgaccgccgtcggtcagcagctacgag
aacaagcagtactttcaaacgagcatcgcacctgcgcagcgaaccgcaacagaggcctac
ttccagacaggtgtcactgataccatctttgccttttcagggctgaaaagtggctacagc
cccgtgagcacagtgtacagtcagccgcctgttcaaagacaggtcgcggcactcaaaccc
cctcccaccgcgagctcggtgtcctcgagctacaccatctatcccacctccaccagcgta
cagcaaactccagcccctatatccacttacacccacagttcttccttcaactccacagct
gctacgtcctactccgctggtctcagctattccagctatgagtctagcggttacacgtcc
gcaccgtcgtacttccagccgacgcagttggcgcctccgcaggcacagcctcaacctcct
ctgcagcagccgcaacagccgccgccaccaccgccacagcagcaaacgcaacaacctccc
aaacagctcgccaactcgtcctggagcaacactgcggtcaccagccccgccgtcaacgcg
tacaagaagcccattttccaccagaacaagatccagaagcccaaaggcccacctaaacag
ccgcagctgcactactgtgatatctgcaagataagctgcgccggtccgcagacgtatcga
gaacatctggaaggacagaagcacaagaagaaagaggcggctcagaagagcggcagtcag
gtgaccaacggccctcgcggcgtccagacgcagttgcgctgtgagttgtgcgacgtttcg
tgcaccggcgccgatgcttatgccgcgcacattcggggatccaagcaccagaaggtggtg
aagttgcacaccaaacttggcaaacccatcccttccacggaccccgttttcgtgagctcc
gcctctgctgccacgacgatgactactagtaaaacggcggcgacagcagccgctcccacc
cctgcatcggtggcgcagaagacgccagtgacggctccttccaaacccgcgtccactcct
gtgaaaaaacccactgctgctaaagttgccattatcggcagtagagcatccacagcagct
ccggtaaagttggaggaggtgaagccgtccgtggtcaagacggacccttcgagtgatgat
gaggacggtgactgtgcaggagctcaaggagacattcagcctgtgggacacgattatgta
gaagaggttcgaaatgacgacggtaaggtgattcgcttccactgtaaactgtgtgaatgc
agtttcaacgatcccaacgctaaagacatgcacctgaagggacggagacaccggctgcag
tacaagaaaaaagtgaacccagacctccctgtggagatcaagcccagcaatcgtgcgcgg
aagcttctggaagtcaaactgcgcaaacagaagcagaaatctgtgctgaagagacagcaa
gaggacgaacagcgctggcacatggaaatgaggagatacgaggaggacatgtactggagg
aggatggaggaggagcagttatattggggcgagcagaggcgcagaatggctccgccccct
ctaatgggccggcctaacatgccggtgccgcccctactgcctgtgcggcggccagattcg
cctgacgaccgccacatcatggccaaacactctgcaatctaccccgtggaggaggagctt
caggccgtccagcgaatcgtctcacattctgagcgcgctctcaaactggtgtctgattca
ctgctggagaaggaggcgagtgctgtggacgacgccgatgatgacgtgacggacaaacag
tcagagtctcaggctcgtgttctcaaaggagtcatgcgtgtgggaatcctggctaaaggt
ctcctcctgcgtggcgaccgcaacgtccagctcatcctgctggcggccaagaaacccacc
gtctctcttttgaggaccgtcgcggagcagctgcccaaacaactagcgaccttttctgaa
gatcagtatgaggtgcaggtacaccctgaggaagccaacatcgtcattttttcaagcaag
gaaccaaaaatgcaggtcaccatctctcttacctcgccagtgatgcgcgaagaccccgtc
cccaacatggagaaagcgtcagagaaagaccctccggatgtcctcaacaggatcaagtgc
cttgagtatttagcagccctgcgacatgctaaatggtttcaggctcgggcaaacggtctt
cagtcttgcgtcatcattattcgggttctgcgggatctgtgtcagcgtgtacctacctgg
ggcaagatgcccgactgggctatggagctgcttgtggaaaaggccattagcagcgcatcc
agccccctcagtcccggggaagctctgcggagggtcctcgaatgcattgccaccgggatt
ctcctgccagatggtccaggtcttctcgacccctgtgagaaaggtcaaacggatgctctg
ggaagcatgtcaaaacaagctagggaagacgtgaccgctagtgcacagcacgcactgcga
ctgttggctttccgtcagatccataaagttctcggcatgggctccttgccggcatccaaa
gctggagctcgtaaccgcaagaggcgacgagacggcagtgatgccggggagggagaagcc
aacgaaaagaaggataaaaaagatgattctcaagatccttga
DBGET
integrated database retrieval system
