Ctenopharyngodon idella (grass carp): 127520027 Help Entry 127520027         CDS       T08802                                  Name (RefSeq) roquin-1a   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cide  Ctenopharyngodon idella (grass carp) Brite KEGG Orthology (KO) [BR:cide00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cide03000]     127520027    04121 Ubiquitin system [BR:cide04121]     127520027 Transcription factors [BR:cide03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     127520027 Ubiquitin system [BR:cide04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     127520027 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-CCCH Prok-RING_4 zf-C3HC4 zf-CCCH_4 zf_CCCH_4 zf-CCCH_UNK Baculo_IE-1 FYVE zf-RING_4 zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  127520027 NCBI-ProteinID:  XP_051763731 LinkDB All DBs Position 10:complement(13563566..13588072) Genome browser AA seq 1083 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEESHRKPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD IEQLPVNTALLQLVSGQVSKPPPVTLLTAAEDVKHYEESRTCVEDLALYLKPLSNTRGAG LNGATQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ADIDPSPDAPAPTWEQLAKGLEAVRTVVHGLVDFIQNHSKKGGDQQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLGLRRQLSQSLTQLNEMDLAAGLLSDEG LQMEGLPRKPSSITNGILAAGPGSTLAHLVSRGSDPSYEPSHKPGKMDSGSLSAPGSPPD SLESIPKSGMLTNALSRVAGDGSVGQKHMPAVPRVPYPYSPHQSELYYSEARVPPPPSAQ YESSQYPAGNPYPHHHVHPRYTRHPAPDPGMPPYPDSYPSSYSSKHQYANPSSHYGYPSH HDGRRHSAYAHPQTFTPREEMVRRSPDIPPPLQPQSAAASYLPESAQERYATENYNHSSQ IRNYHRNAYTRAQPSLDYLHRRRQEIMAQLEERKVVSSPPFGSSHSYDPSYPQDMRGQSH YMEENSHGFGHFRDPDYTASYSPWSCDTFSSYIGSKDMKSKEGMNSMETQNIDKGKSLRA HNLELQRRAADVKDDDPIIPFGSLPTVSRFGAISRTSKPGYPPNSTMPPLPNSAKHAADY TYVNHSGWSGDSYQPHQTSQGHFNERSPAVQVREQLRMELQQVNQQISQQTQSRSLEKPS SVMSQPPRVDWSSGSMSSEQLSLELHQVEREIDIRTQEMAMENHDGKYKRVSVENGQDEH ALQREDHPLTLSEGLNGSISLVQDCGLVSSSMSSLTSKTSSLSLSSEQVASSPDLPKNGV VHS NT seq 3252 nt NT seq  +upstreamnt  +downstreamnt atgcccgtgcaagccccgcaatggaccgagtttctgttgtgtcccatctgcacgcaaacc ttcgaggagagccaccgcaagcccatcagcctgggctgcggacacaccgtgtgcaaaatg tgcctgaacaaactgcaccgcaaggcctgcccatttgaccagaccgccatcagcacggac atcgagcagctgcccgtcaacactgccctgctgcagcttgtcagcggccaggtatccaaa cctccacccgtcaccttactgacagctgcagaggacgtcaagcactatgaggagtcccgc acatgtgtggaagacctggcactctatcttaaacccctgagcaacaccagaggtgcaggg ctgaatggcgccactcagagcgtgctcagcaggcccatgcagcggaagctggtgactctg gtgcactgccagctggtggaggaggagggccgcatccgggccatgcgggcggcccgttct ctgggtgaacgtactgtcactgagctcatcctccagcaccagaacccccagcagctctcc tccaacctgtgggctgccgtcagagccagaggctgccagtttcttggccctgccatgcag gaagaagcattgaagctggttcttctcgctctggaagatggttcggccctttcacggaag gttctggtcctgtttgtggtccagaggctcgaaccacgttttcctcaggcctcaaaaacc agcataggacatgtggtgcagctcctctacagggcctcctgctttaaggtcactaaacgt gatgaggattcctccttgatgcagctgaaggaggagtttcgcacatatgaggctcttcgg agagaacacgactctcagatcgttcagattgcaatggagggtggactgcgtatcgcccct gaccagtggtcatctctactgtacggcgaccagtcccacaagtcccacatgcagtccatt atagacaagctgcagacaccagcatcctttgctcagagtgttcaggaactcaccattgcc cttcagagaaccggagatccagccaatctcaaccgcctcagaccccatctggagctgctg gctgacatcgaccccagcccagatgcccctgcacccacatgggagcagctagccaaaggg ttggaagcggtgcggaccgttgttcacggcctggtggatttcatccagaaccatagcaaa aagggaggtgatcagcagcagccacctcagcacagcaaatacaagacctacatgtgtcgg gacatgaaacaaaaaggcggctgtcctcgtggagcaagttgcaccttcgctcactctcag gaagagcttgaaaagtaccgtaagatgaataaacgtttgggattgcgccgacagcttagt cagtccctgacccagctgaacgagatggacctcgccgctggtctgttatctgacgagggg ctgcagatggagggccttccacgcaaaccctcttccatcaccaacggcatcctagcagca ggacctggatccactctggcccacctggtttctagaggctcggacccgtcttatgagcca tcacacaaaccagggaagatggactcggggagcctcagtgcccctggctcacctccagac tcattggaatccatcccaaaatcaggaatgcttacaaatgccctctctagggtggctggc gatggctcagtcggacagaagcacatgcctgctgtgcctagagttccttacccatattca ccacaccagtctgaactgtattactctgaagctagagtgccgccgccaccatccgcccaa tatgaatcctcccagtaccctgcaggtaatccttatccccaccaccacgtccacccacgc tacacccgtcatcccgctccagatccaggcatgccaccatatccggactcttatcccagc tcctattcctcaaagcaccagtatgccaaccctagctcccattatggatacccttcacac cacgatggccgtcgccactcagcctacgcccatccccaaacattcaccccacgggaggaa atggtccgaaggagtccggacattcccccgccactacagccccaaagcgccgctgcctcg tacctgccggaatcagctcaggaaagatatgccacagagaactataaccactccagtcag atcaggaattaccacaggaatgcctacacacgagcacagccctccctcgactatctgcac cgtcgcagacaggagatcatggcccagctggaggagagaaaggttgtttcctcgccaccc ttcggctcctcgcactcgtacgaccccagctaccctcaggacatgaggggacagagccat tacatggaggagaactcccacggttttggacacttccgggatccggactacactgcctca tattccccttggtcatgtgacaccttcagttcctacatcggcagcaaagatatgaagtcc aaagagggcatgaactccatggaaacacaaaatatagacaaaggcaaaagtctgagagcg cacaacttggagcttcaacgcagagcggcagacgtgaaagacgacgaccccatcattccc tttggctccctgccgactgtgtctcgttttggagccatttcgcgcacgtctaaaccgggc tacccgccaaacagtacgatgccgcctttgcctaactctgccaaacacgctgctgactac acctacgtgaaccacagcgggtggagcggcgactcctaccagccgcaccaaacgtctcag gggcacttcaacgagcgatcccctgctgtgcaggtgcgtgaacagctgaggatggagcta cagcaggtcaaccagcaaatcagtcaacagactcagagccgcagccttgagaagccaagc tcagtgatgtcccagccacctcgagtggactggtcctctgggagtatgtccagtgaacag ctgagtctcgagctgcaccaggtggagagagagatcgacattaggacacaggagatggcc atggagaaccacgatggcaagtacaagcgggtctcagtcgaaaacggacaagacgaacac gctttgcaacgagaggatcatccactaactcttagtgagggcttaaacggctccatcagt ttggtccaggactgcggtcttgtcagtagcagcatgtcctcactgaccagcaagacgtca tctctcagtttgtcctctgaacaggtggccagcagccctgatctgcccaagaacggagtt gtccactcctag

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