Ctenopharyngodon idella (grass carp): 127520057
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Entry
127520057 CDS
T08802
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04110
Cell cycle
cide04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127520057
04114 Oocyte meiosis
127520057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127520057
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cide00535
]
127520057
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
127520057
Meiosis-specific proteins
Cohesin complex and associated proteins
127520057
Proteoglycans [BR:
cide00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
127520057
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
127520057
NCBI-ProteinID:
XP_051763788
LinkDB
All DBs
Position
10:complement(17132565..17164007)
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AA seq
1216 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNAVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKERNLEQYTKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRIKDTLARSEDLDSLIDKTEVEIKDHQKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDTEGGQSQDEGEGADSERGS
SSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL
FDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVI
SAEQAKDFVEDDTTHG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggttattattcaggggtttcgcagctacagagatcagactgtggtt
gaccccttcagctccaaacacaatgtcatagtgggaagaaatggatcgggaaagagtaac
ttcttttatgccatacagtttgtgcttagtgatgagttcagtcatcttcgaccagagcaa
cgtctggctctgcttcacgaaggcactggtcctcgagtcatttcagcctttgtggaaatt
atattcgacaactctgacaacaggctgccgatcgataaagaggaagtgtctctgcgccgt
gtcatcggagcaaagaaagaccagtacttcttggacaaaaagatggtcactaagaacgac
gtgatgaacctgttggagagtgctggtttctcccgcagtaacccttactacatcgtcaag
cagggaaagatcaatcagatggcaacagcgccggactctcagcgtctgaagctgctcaga
gaggtggcaggcaccagagtctatgatgagcgcaaggaggagagtatctcactcatgaag
gaaacagagggaaagcgagagaagattaatgagctgctgaagtacatcgaggagcgtctg
cacactctggaggatgagaaagaggaactggcacagtaccagaaatgggacaaaatgagg
agagctctggagtacactatctacaaccaggagctcaacgagacccgggccaaactggac
gagttgtccagtaagagagagacctgtggagacaaatctagacaactgcgagatgcgcaa
caagatgctcgagacaaagtggaggagacggagcgtgtggtgagggagctgaagtctcga
atctccgccatgaaggaggagaaagaacagctgagcgcagagcgacaggagcagatcaaa
cagagaaccaaactggaactcaaagccaaagacctgcaggacgagctggcaggaaacagc
gaacagaggaaacggctgctcaaagaacgccagaagcttctggagaagattgaagaaaaa
cagaaggagctgcaggaaacggaacctaaatttaacgctgtgaaagaaaaagaggagcga
ggaattgcccgactggctcaagccacacaagagcgaacagacctgtatgccaaacagggc
cgaggcagccagttcacctctaaagaagagagggacaaatggatcaagaaagagctgaaa
tctctggatcaagccatcaatgacaagaaacggcagatcgccgccatacacaaagatcta
gaagacacagaggccaataaagagagaaacctggaacagtacaccaaactggaccaggac
ttgaacgaagtgaagactcgagtggaggagttggacaagaagtactacgaggtgaagaac
cgaaaggacgaacttcagagcgagagaaactacctgtggagggaggagaacgcagaacag
caggcactggcagccaaacgagaagacctggagaagaaacaacagctactgcgagctgcc
accggaaaggctatcttgaatggtattgacagcattaataaagtattggaacatttccgc
cggaagggcatcaaccagcacgtcatcaacggttatcacggcatcgtcatgaataacttt
gagtgcgagcctgccttctacacctgtgtggaggtgactgctggcaccaggctgttttac
cacattgtggaaacggatgaagtgagcaccaagattctgatggagtttaataagatgaac
ttgcctggagaggtcaccttcctgcctctcagcaaactggacgtcagggacaccgcttac
cctgagactaacgatgcaatccccatgatcagcaagcttcgttacagtccgaacttcgac
aaggccttcaaacatgtgtttgggaagacgctgatctgccgcagtatggaagtgtccact
cagctggctcgagctttcaccatggactgcatcactctggagggtgatcaggtgagtcat
cgtggtgctctgactggtggctactacgacacgcgtaagtcccgtctggaactacagaag
gacatgaggaaggcagaggaggagcttggagaactggaggccaaactcaatgagaacctg
cgtagaaacattgaacgtatcaataatgaaatcgaccagctgatgaatcagatgcagcaa
atcgagacccagcagaggaagttcaaggcatccagagacagtatactgtctgagatgaaa
atgctgaaggagaagagacagcagtcagagaaaaccttcatgcctaagcaacgcagtctt
cagagtcttgaggccagcctacacgccatggagagcacgcgggagtctctcaaggcagag
ctgggaacggacctgctctctcagctcagtttagaagaccaacgcagagtggacgacctc
aatgatgagatcaggcagctgcaacaggacaacagacagctgctgaatgagagaattaag
ttggagggaatcatgaccagggtggagacgtacctcaacgagaacctgcgcaaacgtctc
gaccaagttgagcaggaattgaatgaactgagagaaactgaaggaggaaccgtcctcact
gctacaacttcagagttggatggcattaataaacgcataaaagacactctggctcgctct
gaggatttggactccctcattgataagacagaggtggaaataaaggatcatcagaagagt
atggagcgctggaagaacattgaaaaggagcagaacgaagccatcaaccatgacactaag
gagctggagaagatgaccaacagacagggcatgttactaaaaaagaaagaggaatgcatg
aagaagatccgagagctgggctccttgccgcaggaggcctttgagaagtaccaaacactc
actctcaaacagttgttcaggaagctggagcagtgtaacacagagctgaaaaagtacagc
cacgtgaataaaaaagccctggaccagttcgtcaatttctcagagcagaaagagaagttg
attaagaggcaggatgagctggacagaggatacaaatccatcatggagctcatgaacgtc
ctggagctgcgcaaatatgaggctatccagctcaccttcaaacaggtctctaagaatttc
agcgaggtatttcagaagctggtacccggtggtaaagccactctggtgatgaagaaggga
gacactgagggtggacagtctcaggacgagggcgagggagcagacagcgagagaggatct
tcctctcagagcagtgtgccgagtgtagaccagttcactggtgtgggaatcagggtgtca
ttcacaggtaaacagggagagatgagagagatgcagcagctctctggaggtcagaagtct
ctggttgctctggctctcatttttgccatccagaaatgcgaccctgctcctttctacctg
tttgatgaaatcgaccaggctctggatgcccagcacagaaaagcagtgtcagacatgatt
gtggagctggctggacatgctcagttcatcaccacaaccttcagacctgagcttctggag
tcagccgataagttctatggcgtcaaattcaggaacaaggtgagtcacatcgatgtgatc
tcagcagagcaggcgaaggactttgtggaggacgacaccactcatggctga
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