Ctenopharyngodon idella (grass carp): 127520139
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Entry
127520139 CDS
T08802
Name
(RefSeq) calpain 2, (m/II) large subunit b isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04141
Protein processing in endoplasmic reticulum
cide04210
Apoptosis
cide04217
Necroptosis
cide04218
Cellular senescence
cide04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127520139
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127520139
04217 Necroptosis
127520139
04218 Cellular senescence
127520139
09144 Cellular community - eukaryotes
04510 Focal adhesion
127520139
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127520139
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
127520139
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C2: calpain family
127520139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
127520139
NCBI-ProteinID:
XP_051763974
LinkDB
All DBs
Position
10:8089875..8106890
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AA seq
698 aa
AA seq
DB search
MSGVASTLAKKRAQAAGFGTNANATKYLNQDFEALRSQCLSKGTLFSDPSFPAAPESLGF
KELGPSSYKTRGLVWKRPGELCSKPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEV
LARVVPGGQGFGDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELVFVHSAEGNEFWSAL
LEKAYAKVNGCYEALSGGSTSEGFEDFTGGIAENYDLSKPPSNMFQIIQKALEAGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGATEVNYRGRKEKLVRMRNPWGQVEWTGAWSDN
SSEWNSVAASERPNVCAEDGEFWMSFSDFLSHYSRIEICTLTPDAITSDSVKHWAVTNHD
GTWRKGSTAGGCRNNPYTFWMNPQYVIKLSDEDDDPNDNEVGCSFVVGLIQKNRRRLRKM
GEDMHTIGFAIYEVPPQFQGQRDVHLDKNFFLTHGQKARSETFINLREVCTRFKLPPGEY
LVVPSTFEPNKDGDFCLRVFSEKQTETLPCDDPVDAELPDETVSDAEVDSGFRGMFVKLA
GADMEISATELMTILNKIIAKRTDIKTDGFSLETCRVMVNLMDDSGNGKLGLGEFATLWK
KVQKYLGIYKKNDLDNSGTISTPELRLALKEAGFCLNNTIFQLLVARYAETDMTLDFDNF
VACLMRLEMMFRVFKKLDAHKTGFIELDFQQWLNFTMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagtcgcctctaccctggccaagaagagagcgcaggctgcagggtttggaact
aacgcaaatgccactaaatacctcaaccaggactttgaggcgctcaggagccagtgtctc
agcaaagggaccctgttctcagacccgtctttcccagccgcacccgaatccctgggcttt
aaagaacttggacccagctcgtacaaaaccagaggactagtatggaaaagacccggggag
ctgtgctcgaaaccacaattcatcatcggtggagcgacacgaacggatatctgtcaagga
gctttgggtgactgctggctgctagcggccattgcctccctgaccctgaatgaagaagtt
ctggcccgagtggtgcccggcggacagggctttggtgacaattatgctggaatcttccat
ttccagttctggcagtttggcgagtgggtggatgttgttattgacgatcggctgccagtg
aaagacggtgagctggtgtttgttcactccgccgagggaaacgaattctggagcgccctg
ctggagaaggcctatgctaaagtgaacggctgttatgaagccctgtctggaggatccacc
agtgagggttttgaggatttcactggaggcattgctgagaactacgacctaagtaaaccg
ccatccaacatgtttcagatcatccagaaagccctggaggctggagctttgctaggctgc
tccatcgatatcactagtgctgctgattcagaagccgtcacccgtcagaagctggtgaaa
ggccatgcctactcactcacgggggcaacagaggtgaactatcgtggccgcaaggagaag
ctggttcgtatgcgcaacccttgggggcaggtggagtggaccggagcctggagtgacaat
tcatctgaatggaacagtgttgcggcttcagagcggccgaacgtctgcgctgaggatggt
gaattctggatgtcattctcagatttcctgagccattactctcgtatagagatctgcact
ctgaccccggacgccatcactagcgattcggtaaaacactgggccgtgacaaaccacgac
ggcacttggaggaaaggctccaccgctgggggctgcagaaacaacccttacacattctgg
atgaatcctcaatatgtgattaagctgagtgacgaagatgacgatccaaatgataatgag
gtgggctgcagtttcgttgtcggtctgatccagaagaaccggcgccgcctgaggaaaatg
ggagaggacatgcacactatcggctttgctatttatgaggtacctcctcagtttcagggt
cagcgggacgtgcacctcgataagaacttcttcctgacgcacggacagaaagctcgctct
gagactttcattaacctgagggaggtctgcacacgcttcaaattgcctccaggagagtac
cttgttgtgccatccaccttcgaacccaacaaggatggagacttttgccttcgcgtcttt
tctgaaaaacagactgaaacactaccatgtgatgaccctgtggatgctgaattacctgat
gagactgtctcagacgctgaagttgattctggattcagaggcatgttcgtaaaacttgct
ggagctgacatggaaatctccgccacagagctcatgactatcttaaacaaaatcattgcg
aaacgaactgacataaagacagacggcttcagtttggagacgtgtcgtgtcatggtgaac
ctcatggatgacagtgggaatggaaaactgggtctgggagaattcgctactctgtggaag
aaagtgcagaaataccttggaatttacaagaagaatgacttggataattcaggaaccata
agcactccagagctgcgtttagcactgaaagaggccggtttctgtctcaataacactata
tttcagctgctggtagcacgttacgccgagacagacatgacccttgactttgataacttt
gtggcctgcctcatgcgtctggagatgatgttccgggtgttcaaaaagctggatgcccac
aagactggcttcattgagctggactttcagcagtggctgaactttaccatgatttag
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