Ctenopharyngodon idella (grass carp): 127520175
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Entry
127520175 CDS
T08802
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127520175
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Protocadherins
127520175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
7TM_GPCR_Sri
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
127520175
NCBI-ProteinID:
XP_051764034
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All DBs
Position
10:33392291..33414699
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AA seq
832 aa
AA seq
DB search
MAFFSLLSYSDIPWMVSTHSKWQVVFLILCFYGMDFVYCNVRYSIPEEMPEGSFIGNIAK
DLGIEISRLISGKARVVTKGGRQYVDLSRDKGTLVVKERIDREELCKQTTPCSFSFDLIV
ENPIQLHRVTVEVQDINDNAPLFPKENVYLKIAENAVLGARFPLDSAIDADVGLNGIQSY
KLNPSDSFKLEVHSQTDGNKYIEMVLQRELDREERDEIKLVLVAADGGSPQKSGTVKIHV
TVLDNNDNAPVCKQSVFKTEVRECSPAGTVIGTVSATDADEGVNGHVSYSFALATKEARQ
LFEINTDTGEIRLLANLDYESQNSYQLNINARDKGGLSDTCKFVIDVIDENDNSPSIQLM
SFSNTLPENSPVGTTVAVINVEDADSGKNGLVRCSINQNIPFKIESSLTDYYSLVTDDIL
DRESFTEYNITILVSDQGSPARHANKTLTVKISDVNDNPPIFDDEEYKTFVSENNSPGLT
ILTVKANDADWGPNAQLSYFLKDEDMRGAPLSSLVSVDSLTGTIHAVKSFDFEQLKSFSF
NVTARDGGSPPLSSEVTININVQDQNDNAPQVLYPVQTGGSVVAEIVPRAADVGYLVTKV
VAVDVDSGQNAWLSYKLQKATDRALFEVGLQNGEIRTVRQVTDKDAVKQKLTVVVEDNGQ
PSRSAVVSINVAVADSFPEVLSEFTDFTHEKQYNDNLTFYLVLALAAVSFLFITCVVVII
SVKIYRWRQSRFLYQSNLPVIPYYPPHYADTGVTGTLPHGYNYEVCMTTDSRKSDCKFST
LGGQNVLVVDPSFTETMQHTIKKNNSIDGLASTELLKPVMLIGIRMLVFHIF
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggctttcttcagcttattgagctattcggacattccttggatggtttccacgcattca
aaatggcaggttgtgtttttaattctctgcttctacggaatggacttcgtatattgcaat
gtgagatattccatcccagaggaaatgccagagggatcattcataggcaacatcgccaag
gatctggggatagagataagtagactcatatctggaaaagctcgcgtcgtaacaaagggc
ggacgacagtatgtcgacctgagcagagacaaaggaactctagtagttaaagaaaggata
gatcgcgaggagctctgtaagcaaacgacgccctgcagcttcagttttgatctgatcgtt
gaaaaccctatccagctgcatcgagtcacagttgaggtgcaagatataaacgataatgct
cctttatttccaaaagaaaatgtttatttgaaaatagctgaaaatgcagttttgggagct
cgcttccctttggatagcgctatagatgcagatgtcggtctaaatggtatacagagctat
aaacttaatccatctgatagttttaaactggaggttcatagtcagaccgatggaaacaaa
tacattgagatggttttacagcgagaactagatcgagaggagcgcgatgagattaaattg
gttcttgtagcagctgatggaggatcacctcagaaatcaggaactgtaaaaattcatgtt
actgttctggataataatgataatgccccggtgtgtaaacagtcagttttcaaaactgaa
gttagagaatgttcacctgctggtactgtcattggtactgtcagtgctactgatgccgac
gagggtgtaaatggccatgtttcctactcctttgctcttgctacgaaagaagcaaggcag
ctttttgagataaacacagatacaggtgagattagacttcttgcaaatttagattatgaa
tctcaaaatagctatcaattaaacattaatgcaagagataaaggaggtttgtcagatact
tgcaaatttgtcatagatgttattgatgaaaatgacaactctccaagcatacagcttatg
tccttttcaaacacccttccagaaaattccccagtgggaacaactgtagccgtcattaat
gtagaagacgcagattcgggtaaaaatggtcttgttcgttgctcaataaatcaaaacata
ccttttaaaattgagtcatctctcacagactattatagtttagttactgatgatattctt
gatcgagaaagtttcactgaatataacataacgatcttggtatcggaccaaggaagtcca
gcgcgacacgcaaacaaaacactgactgtaaaaatatctgacgtcaatgacaacccgccc
atatttgatgatgaggaatataaaacatttgttagtgaaaataattctcctggtctgact
atactgactgttaaagcaaatgatgctgactggggtccaaacgcgcaattgtcctacttc
ctgaaggatgaagacatgcgtggcgcaccgctgagttctctcgtgtctgtagattcactt
actggaactattcatgcagtgaaatcctttgattttgaacagttaaaatcgttttccttt
aacgtgacagctcgagatggaggatccccaccactgagctctgaagtgacaataaatatt
aacgttcaagatcagaatgacaacgctcctcaggttctgtatccagtacagactggaggt
tcagtggtggctgagattgtgcctcgtgctgcagatgttggatatctcgtcactaaagtg
gtggctgttgatgtggactctggacagaatgcctggctctcctataaactacagaaagct
acagacagagcgctgtttgaagtgggtttacagaatggagaaataagaactgtgcgacaa
gtgactgataaagatgctgtcaaacagaaactcactgttgttgtggaggataacggacag
ccctctcgctcagctgtggtctccattaacgtggctgtggctgacagctttcctgaagtg
ttgtcagagttcacagactttacacatgaaaaacaatataacgacaacctgactttttat
ttagttctcgcactggccgctgtttctttcctatttatcacttgtgtggttgtgataata
tcagtaaagatctacagatggagacaatctcgcttcctctatcagtccaatctgcctgtt
attccgtactatccaccgcattacgcagacacaggagtcactggaactctgccgcacggg
tacaattatgaagtgtgcatgacgactgactcgaggaagagtgactgtaagttttctaca
ctcggtggacagaatgttttagtggtggacccgagtttcactgagacgatgcagcataca
atcaagaaaaataactccatcgacggtctcgcgtctacagaattgttaaagccagtgatg
ctgattggaatcagaatgctcgtgtttcatatattctag
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