Ctenopharyngodon idella (grass carp): 127520271
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Entry
127520271 CDS
T08802
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127520271
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
127520271
NCBI-ProteinID:
XP_051764199
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Position
1:9629387..9635424
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AA seq
867 aa
AA seq
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MHIWILKIILLVATSLSLVEMYDNYGEICRNLCTCEEKEGILTVSCENRGIVRLSEISPV
QFSMYHLLLTGNLLKRLSVNDFINYTGVTILHLGNNDISEVETGAFNGLQGLKRLHLNNN
KIDILRDDTFVGLESLEYLQIDYNFISTIEPNALSRLHQMTVLILNDNLLSSLPTNIFRN
VPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELIALKAWLESIAYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRAISEYEMRPPPPLSTSSYFQTTPAAVTASATS
SAVLRSSSRPTKGTRQSSKTKSKPTSRIPANPYNYGPIIAFQTKSPVPLDCPTTCTCNLQ
ISDLGLNVNCQERKIENISDLKPKPYNPKKMYLTGNYIPVVRRSDFVEAEGLDLLHLGNN
RIALIHDRAFGDLINLRRLYLNGNLIDRLTADMFFGLKSLQYLYLEYNKIREIVGGTFRF
VPNLQLLFLNNNLLKTLPGGIFSSLSLSRLNLRSNQFQNLPVSGVLDQLKALVQIDLFEN
PWDCTCDVVGMKIWLEQLNTGTVVNDVKCVTPKRLAGQDMRVVPSEQLCPDYSDIIVSTV
VPSEEPSADRITTTETPQRFNTTSSNVPLSVLILSLLLVFIMSVFVAAGLFVVVMKRRKK
SQSDRTSTNNSDVSSFNLQYNLYSNRSVPKVKAPAGHVYEYIPHPLGHMCKNPIYRSREG
NAVEDYPDLHELKVTYRSNADEDQEVTLRSPNYTVSTIEPREQPSPVQDAEHFFRGILEP
DKSPSTAGSRFEYKYTGPVPYTYQPNFDVRRQFLHPEGIRETMLYGPAPSTVYVEPNRND
YLELKAKLQIEPDYLEVLEKQTTQSQF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcatatctggatactgaaaataatattgctggttgccacatctctgagtctggttgag
atgtatgacaattatggggagatctgtaggaatctgtgcacttgcgaggagaaggaaggc
attctaacggtcagttgtgagaacaggggcattgtgcgactgtcggaaataagcccggtg
caattttctatgtaccatcttttactgacaggtaatttgctaaaaagattgtctgtcaat
gacttcatcaactatactggagttaccattttgcatttaggtaataatgatatatctgag
gtggagactggggcgttcaatggactccagggattaaagagattacatttgaacaataac
aaaatagacattcttagggacgacactttcgtcggactcgagagcctagaatacctgcag
attgattataattttattagcactattgaaccgaatgctctgagcaggcttcatcaaatg
actgtgctgattctcaatgacaacttgttgtcctctctgcccacaaacattttccggaat
gtgcccctgacgcacctggatcttaggggaaatcgcttaaaaatgttcccttacatcggc
cttttggagcatatggacaaagtagtggaattacagcttgaggaaaatccgtggaattgc
tcttgcgagctcattgcgctcaaggcttggctggagagcatcgcctacactgctctggtg
ggggaggtggtttgtgagactcctttcaggctccatggcagagatctggacgaggtctca
aagcaggaactgtgtcccagaagggccatatcagagtacgagatgcgccctcctcccccg
ctcagcaccagcagctatttccagaccacgccagcggctgtgacggcatcagccacgtct
tcggccgtcctgcgatcctcatctaggccgaccaagggcacccgccaatccagcaaaacc
aagtccaagcccacttctcgaatcccagccaacccctacaactacgggcccatcattgct
tttcagaccaaatctcccgtgcctttggattgccccaccacctgtacatgcaatctgcaa
atctctgacctggggctaaacgtcaactgccaggaaaggaagatcgaaaacatatcagat
cttaagcccaagccatacaatcctaaaaagatgtacctcacggggaactacatccccgtc
gtacgtagatctgacttcgtggaggctgagggactggatttattgcacctgggaaacaat
cggatagcactcatacacgacagagcctttggggatttaattaacctacgtaggctgtac
ttgaatggcaatttgattgacagactcacagcagatatgttctttgggctaaagagtctg
cagtacttgtatttagaatataataagattcgagagattgtaggaggcaccttccgcttt
gtgcccaaccttcagctacttttcctcaataacaatcttttaaaaacgttgccaggaggc
atcttctctagtctgtctctctcccgcctcaaccttcgcagcaaccaatttcaaaacctg
cctgtgagtggagttctggaccagctgaaagcattggttcagattgacctgttcgagaac
ccttgggattgcacctgcgacgtggttggcatgaagatctggttggagcagctgaacacc
ggaacggtggtgaacgacgtcaaatgcgtgacacccaagcggcttgcagggcaggatatg
cgggttgtcccttctgagcagttatgtccagattactctgacatcatcgtgtccactgtg
gttccttctgaggagccttcagcagacaggatcaccaccaccgagacaccccagaggttt
aacaccacttccagtaatgttcctttgtctgttctgattctcagcctgctccttgttttc
ataatgtccgtgtttgtggcagccggcctgtttgtggtggtgatgaagaggcgtaaaaag
tctcagagcgaccgtaccagcacaaacaactcggacgtgagctccttcaacctgcagtac
aatctctatagcaatcgctctgtccccaaggtcaaggccccagcgggtcacgtctatgag
tacattccccatccattaggtcacatgtgcaaaaatccaatctacaggtcccgggaaggg
aacgctgtggaggattaccccgatctgcacgaactcaaggtcacctacaggagtaatgct
gacgaggaccaggaggtcaccttgaggagccccaattacacggtgagcaccatcgagcct
cgtgagcagccgtctcctgttcaggatgcagaacacttcttcagagggattctggagccg
gataaatctccatcgactgctggcagcaggtttgaatataagtacactggccccgtcccg
tacacataccaaccaaacttcgatgttaggcgccagttcttacatcctgaaggaatacga
gagactatgctatatggtccagcgccaagtactgtctatgtggagcccaatagaaatgac
tatttggaactaaaggcaaaacttcaaatagagccggactacctcgaagttcttgagaaa
cagacaacacagagtcagttttaa
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