Ctenopharyngodon idella (grass carp): 127520353
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Entry
127520353 CDS
T08802
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127520353
09123 Folding, sorting and degradation
03018 RNA degradation
127520353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127520353
03041 Spliceosome [BR:
cide03041
]
127520353
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127520353
mRNA degradation factors
5'-3' decay
Lsm complex
127520353
Spliceosome [BR:
cide03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127520353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
127520353
NCBI-ProteinID:
XP_051764299
LinkDB
All DBs
Position
1
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAVEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccggaagcagacaccaagtgatttcctgaagcagatcattgggagaccagtg
gtggtgaagctgaactctggtgttgattacagaggagtgctggcctgccttgatggctac
atgaatatcgctgtggaacagacagaggaatatgtcaatggccagctgaagaacaagtat
ggggatgcatttctcagaggaaacaatgtgttatacatcagcacccagaagaggaagatg
tga
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integrated database retrieval system
