Ctenopharyngodon idella (grass carp): 127520422
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Entry
127520422 CDS
T08802
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
127520422
NCBI-ProteinID:
XP_051764430
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Position
10:complement(16621892..16648142)
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AA seq
735 aa
AA seq
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MNKKDMAGPLLSAHLFVLVEHLCLLHHIHAGAFYGHKPLPQQPLPQLPLLSHGNEGIPQH
HYHGKEMTHMPYGNEMPLLPQYGKERPQIPMHMGKPIVGKGETIPRGEKGPPGETGPMGP
PGPQGPPGLPGHGIPGPGGKPGPQGPPGFPGIGKPGMPGLPGKPGGIGLPGPKGELGPVG
GEGPIGMPGPPGLPGPHGLPGVAKPGGQGLPGQPGPRGEPGQKGFPGIPGLPGPKGENGI
GLPGLPGVKGPSGLPGPPGQVGLPGVGKPGLNGLPGAPGGQGKPGAPGEPGLAGVPGERG
QIGPPGLPGFGKPGLDGFPGKPGLPGGRGEPGPSGLPGGPGLPGFGKPGYPGPKGEKGHG
GLPGPQGPKGEKGHGGLTGMIGPPGPSGLPGPPGLMGPPGGIGFPGSKGEGGAVGPKGQL
GPKGEPGPPGHPGKPGFPGELGQPGPRGLPGSLGPKGENGYKGLPGLPGAPGKPGEKGEG
GFPGEKGNPGPMGIPGLMGPAGPIGPPGLPGPKGEYGAPGKPGIPGEGKPGLPGPIGPPG
IPGMGGPPGQPGIPGPPGPPGLPGPPAQSPFFGQILPETGPGLDGAKGYKKEKPGGAIIG
RNGLEMPAFTAQLTTPFPPVGQPVVFNKILHNGNQNYNSQTGIFTCKIPGIYYFVYHVNC
KGNNVWVALYRNNEPVMYTYDEYKKSYLDQASGSAVLPLQVGDTVHVQLPSDQAAGLYAG
PYVHSSFSGYLLYPM
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaagacatggctgggcctctcctctctgcccacttgtttgtactggtggag
cacttgtgtctgctacatcatatccatgcaggagcattttatggacacaagccactgccc
caacagcctctgcctcagttacctctcctgtcacatggcaatgaggggataccccaacac
cattaccatggaaaggaaatgacacacatgccatatggaaatgagatgcctttgcttcct
cagtatggaaaagagcgtccacagatacccatgcacatgggtaaacccattgtaggaaaa
ggtgaaactattccaagaggagagaaaggtccccctggagagactggtccaatgggacct
ccagggccacagggacctcctggacttcctggccatggcatcccaggacctggaggtaaa
cctggtcctcaaggtccaccaggattccctggaattggaaagccaggaatgccaggtttg
ccaggaaaacctggtggtataggtttaccaggaccgaagggtgagttggggccggttggt
ggtgaagggccgataggaatgccaggacctccaggtcttccaggaccacatggcctacca
ggtgtggcaaaaccaggtggacaaggacttccaggacaacctggtcctcgtggagaacct
ggacaaaagggattccctgggatccctggtctcccagggccaaagggtgagaatgggatt
ggtctcccaggactgccaggtgtaaagggaccttctggacttccaggaccaccaggtcaa
gtaggactaccgggagttggcaagccaggactgaatggactacctggggctcctggaggg
caaggtaaacctggtgcacctggagagccaggattggcaggagtcccaggggaaagagga
caaataggaccaccaggactaccaggctttggaaaacctggtttggatggttttccaggg
aaaccgggtctcccaggtggaaggggcgaaccaggtccttctggtttacctgggggccca
ggcttgcctgggtttggcaagcctggatatcctggccctaaaggtgaaaaggggcatggt
ggtttgcctggccctcaaggcccaaaaggtgaaaagggtcatggtggccttactggaatg
attggaccaccagggccaagtggcctcccaggtcctccaggtctgatgggaccccctgga
ggcattggtttccctggttcaaaaggagagggcggtgcagtaggacctaaaggacaactg
ggtccaaaaggtgaaccagggcccccaggacatccaggcaagccaggattcccaggagaa
ttggggcaaccaggacctagaggcttacctggttccttaggacctaaaggtgaaaatgga
tacaaaggcttacctggcctacctggagcccctgggaagcctggtgaaaaaggagaaggt
ggatttccaggagagaaaggtaatccagggcccatgggaatcccaggattaatgggtcca
gcaggaccaataggcccacctggtctaccaggcccaaaaggggaatatggcgcaccagga
aaacctggaatcccaggtgagggaaaaccagggcttccaggcccaataggtcctcctggt
atacctggaatgggtgggcccccaggtcaacctggaatacctggtcctcctggcccacct
ggcctacctggacctcctgctcaatctccatttttcgggcaaatacttcccgagacaggt
cctgggctagatggggcaaaaggttataagaaagaaaagcctggaggagccattattggt
aggaatggcttagagatgccagcatttacagctcagctgacaaccccattccctccagtt
gggcaacctgttgtcttcaacaagattctgcataatggcaaccagaattacaactctcaa
accggcattttcacttgcaaaatacctggaatttactactttgtctaccatgttaattgc
aaaggaaacaatgtatgggtggccttatacaggaacaatgagccagtaatgtatacatat
gatgaatacaaaaaaagttacctggatcaggcatcagggagtgcagtgctgcccttacaa
gttggagacactgttcatgttcagttaccatcagaccaagctgcaggactttacgctggt
ccatatgtccactcatcattctctgggtatttgttatatcccatgtga
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