Ctenopharyngodon idella (grass carp): 127520543
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Entry
127520543 CDS
T08802
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127520543
Enzymes [BR:
cide01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
127520543
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127520543
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
127520543
NCBI-ProteinID:
XP_051764728
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Position
10:13374852..13379493
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AA seq
487 aa
AA seq
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MSLILKSLANDICVISMEGSTADGVSAPLPGRCAFYVVKKKRYCKMIVGSRKTFCGEHAN
AGEESERKRIPCPLDPKHTVFEDNLAKHLKKCNSKEKPKPIYYVKDINAGCESEDETIEE
ISIADRSKEELDELIVKLKTALQGLNTKLVEKTLSHSALHEPLNDPKNGDSAFKHLKQQA
SILGNMEGLELLSPNRCYIEFGAGKGKLSHWIHIALKAAENVHFLLVERSSTRFKVDGKH
KNADLTFDRLQVDIQHLDLRKVPLLKEKGLPVIGVGKHLCGAATDLALRCLFEHNCIDKD
DDPPKKRVKLNQTEGAGDDMKPVPSTEDRETGEELIVSGLAIALCCHHRCDWRHYVGKEF
FRQKGLGPEEFAAFQRMSSWATCGMRKFSSKITEKTIELKTDEEEEHEMSEEAMPDTFNG
LMSVEDREQIGRLCKHLIDHGRVYYLQQKGFETSLRYYTSRDVSLENVLLTAIPTAIQNR
DESKQPS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttattttgaaaagtcttgcaaacgatatttgcgtcattagtatggaggggtcc
acagcggacggcgtgtcagcgcctttacctggacgatgtgctttttatgtagtaaaaaag
aaacgatactgcaagatgattgttggaagtaggaaaaccttctgcggggaacatgcaaat
gctggcgaagagagtgagagaaaacgaattccttgtcctttggaccctaaacacactgta
tttgaagataatttggctaaacacctgaagaaatgtaattccaaggaaaaaccaaaacct
atttattatgtgaaggacatcaatgctggatgtgaaagtgaagacgaaaccatagaagag
atttccattgctgatcgatccaaagaggaattggatgagttgattgtgaaactcaaaact
gcattacaaggactaaataccaaactcgttgaaaaaacactctcacattctgctctacat
gagcctctaaatgatccaaagaatggagattctgcttttaaacacctcaaacaacaggcc
tcgattcttggaaacatggagggtttggaactgctcagcccaaacagatgctacatagag
tttggggcagggaagggaaaattgtcccattggattcacattgctcttaaagcagctgaa
aatgtccattttttacttgtggaaaggtccagtactcgctttaaggtagatggcaagcac
aaaaatgcagatttgacttttgataggcttcaggttgatattcagcaccttgatttacgc
aaagttcctctcctgaaagaaaaaggacttcctgttattggtgttgggaagcacctctgt
ggtgcagcaactgatctggcccttcggtgtttatttgagcacaactgcattgacaaagat
gatgaccctccaaaaaagcgtgtaaaacttaatcagacagagggtgctggtgatgatatg
aagcccgttccctcaactgaagacagggaaactggtgaagagctcatagtgtcagggctg
gccatcgctctttgctgtcaccaccgttgtgactggagacactacgtgggaaaagagttc
ttcaggcagaaaggtcttggaccagaagagtttgctgcttttcagcgcatgtcgagctgg
gccacttgcgggatgagaaaattcagctccaagataacagaaaaaacaattgaacttaaa
acagatgaagaggaggaacatgagatgagcgaggaagctatgccagataccttcaacggt
ttgatgtcagttgaagatcgcgaacagatcgggcggctttgtaagcatctgattgaccac
ggaagagtgtattacctccagcaaaaaggctttgaaaccagtctgagatactacacaagc
agagatgtgtcattggagaatgtgttactaactgccattcccacagccattcagaataga
gatgaatctaaacaaccttcttaa
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