Ctenopharyngodon idella (grass carp): 127520558
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Entry
127520558 CDS
T08802
Name
(RefSeq) fibrillin-2 isoform X1
KO
K23342
fibrillin 2/3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127520558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127520558
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127520558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
TB
hEGF
EGF_3
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
127520558
NCBI-ProteinID:
XP_051764764
LinkDB
All DBs
Position
10:complement(24329608..24421232)
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AA seq
1768 aa
AA seq
DB search
MCPVPGSDEYVSICLVGSALSGYSKEDPDMNPQHHSSFNPTTNDQILHPFNDNGHMIPQI
HQTLQISQIPQIPGNGNRFKTQQPVFVSVNETMNRCRLFPNLCLNGRCVPMGSDYRCDCN
TGYREDNRGECSDVDECAFEPCTNGHCINTPGSYYCRCHTGFLRVPGKQTCIDVDECLQN
GVLCKNGRCLNTEGSFQCICNAGFKLTPDGRNCIDNDECAATNMCLNGMCINEDGSFKCV
CKPGFTLNSSGRYCTDIDECQTPGVCMNGQCVNTEGSFRCECFAGLTVGVSGRICVDTHM
HSTCYGAVKRGLCLRPFQRAVTKSQCCCANPDYAFGEPCHPCPSKNSVEFQALCASGVGF
SADGKDINECALDPDICSNGVCENLRGTFHCVCNRGYESDQTGRNCLDIDECVINSLLCD
NGLCRNVPGSYSCTCPDGYTFRHDTETCEDVNECASSPCVNGLCKNSAGSFSCECSLGSK
LDSTGLLCVDSLKGSCWLTLRDGRCEVNINGATLRSQCCATLGKAWGSPCEPCQTDPVCE
QGFARPRGASCEDVNECEVFPGVCHNGQCVNTRGSFKCQCPESLTLDVTGRLCVDVRSEP
CFLTYDEDVCTQPVPGRFRMDVCCCTVGLAWGKDCDLCPEPGTRQFDALCPRGPGFANKG
DMLTGRAVYKDINECKVFQSICIHGKCRNTIGSFRCRCDSGFALDTNEQNCTDIDECKIS
PDVCGHGMCVNTLGSFQCNCFPGYESGFMMMKNCMDIDECERNLSLCNGGTCENTDGSYK
CVCPLGHQLSVDGSACEDVNECDLSSTLCHNGRCVNVVGTYQCSCNSGYQTTPDRKECTD
IDECTIENGGCELYCSNSEGSYYCSCGQGYALTPDQRTCADVNECEEDVGICEGGQCINV
PGAYHCLCFEGFMTSADMRTCIDVNECELNSNICMFGECENTKGSYVCHCEMGYAVKKGT
SGCTDVNECEMNTHNCDTHATCVNTAGLYRCSCWDGWSGDGVKCADVDECANRTHVCSAD
AECVNTAGSYRCECSDGFTGDGFTCSDMDECAEDVDLCENGQCLNVPGSYRCECEMGFTH
TPNSKTCRDIDECSFQNICVFGTCQNIPGMFRCICDKGYELDKTGGNCTDVDECLDPISC
VNGHCENTAGSYQCNCPIDFELNPTGIGCVDTRIGNCFLEVTYPGRGGLACSGEVGFGVS
RSSCCCSKGQAWGNPCDLCPPLNTSEYNTLCPGGEGFKPNPITIILEDIDECQELPGLCQ
GGNCINTFGSFQCDCPTGYYLNTDKRICEDIDECVLSSGVCGPGTCYNTLGNYTCVCPQD
YMQVSGGHSCMDMRKSLCYRNYSGSTCEHQLKFNTTQRLCCCAYNVGKAWNKPCQACPSP
GTGDYRSLCGSVTGFKIDFETGKPKDIDECHEIPGVCAHGVCINHMGSFHCECPSGFIYN
DLLLICEDIDECSSGEHVCQINADCINRPGGYQCECADGYRLTPDGACADRNECVETPSV
CRHGDCVDIPGGYKCVCHTGFTATLNHRMCVDVNECSRQPCGNGTCKNSIGSFNCICHQG
FDLTSNNYCTDIDECVVFHSQLCRNGRCVNNVGSFQCLCREGYELSLDGKTCIDVNECIM
IPGICAPGTCLNLDGSFRCVCPDGYVVHNEHCVDVNECSEEPGICAYGSCFNSLGSFECV
CKPGFVLSEDRRRCYDTRESFCFTRFENGKCSVPQAFNTSKAKCCCSVMAKEGWGDPCEL
CPKEQDAAFQDLCPFGHGIIPGVGDTRT
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcctgtaccaggatcagatgaatatgtcagcatctgtctggtgggctctgctctg
agtggttacagcaaagaggatcctgatatgaaccctcaacaccacagcagcttcaatcct
accactaatgaccaaatacttcacccatttaatgacaatgggcacatgatacctcagatt
caccagactcttcaaatttcccaaatacctcagatcccagggaatggtaatagatttaaa
acacaacaacctgtttttgttagtgtaaatgagaccatgaacaggtgtcgcctgtttcca
aatctgtgtctaaatggacgctgtgtacccatggggtctgactaccgctgtgactgtaac
actggatacagagaggacaacagaggagagtgctcagatgtagatgagtgtgcgtttgaa
ccctgcactaatggacactgtatcaacactcctggttcctactactgcagatgccacaca
ggctttctcagagttccaggaaaacagacctgcattgacgttgacgaatgtcttcagaat
ggggtgctgtgtaagaacggccgctgtctgaacacagagggcagttttcaatgcatctgt
aacgcaggattcaagctcacacctgatgggagaaactgcatagataatgatgaatgtgcc
gccacaaacatgtgtcttaacggaatgtgcatcaatgaagacggcagctttaaatgtgta
tgtaaacctggattcaccctcaactccagtggccgatactgtacagatatcgatgagtgc
cagactccaggtgtgtgtatgaatggacagtgtgtaaacacagagggctctttcaggtgt
gagtgttttgctggtcttactgtaggagtaagtggccgcatatgtgtagacacacacatg
cacagcacctgttatggagctgtaaaaagaggcttatgtttacggcccttccagcgagct
gtcaccaagtcacagtgctgctgtgccaaccctgactatgcctttggtgagccgtgccat
ccctgccctagcaaaaactcagttgagtttcaggccctgtgtgcgagcggtgttggattt
tctgctgatggcaaagacattaatgagtgtgctctggatcctgatatctgctctaatgga
gtgtgtgagaatctcagaggaactttccactgcgtctgtaacagaggctatgaaagtgac
cagactggcagaaactgtctggatattgatgaatgtgtaataaacagtctcctatgtgat
aacggcctgtgccggaatgttcctggcagctacagctgcacctgcccggacggatacacc
tttagacacgacacagagacgtgtgaggacgtgaatgagtgtgcgagcagcccgtgtgtt
aatggactctgtaaaaacagtgcgggttccttctcctgtgagtgctcactaggaagtaaa
ctggactctactggacttttatgtgttgacagtctgaagggctcgtgctggttgaccctc
agggacggccgctgtgaagtgaacattaatggagctacactgaggtcacagtgctgtgcc
acgctgggaaaggcctggggcagcccatgtgaaccatgtcaaaccgatcctgtatgtgaa
caaggatttgctcggccaagaggggcttcatgtgaagacgtgaatgagtgtgaggtgttt
cctggtgtgtgtcataatggacagtgtgtgaacactagaggttcctttaaatgtcagtgt
ccagagagtcttacactggatgtcactggacgtctctgtgtggatgttcgctcagaaccc
tgtttcctaacctacgatgaagatgtgtgtacgcagccggtaccaggacggttccgtatg
gatgtgtgttgctgtacggtgggtttagcctggggcaaagattgtgacttatgccctgag
cctggcacacggcagtttgacgctctgtgcccaagaggaccaggcttcgccaacaaaggc
gacatgctcactggcagagctgtttataaagatataaatgagtgtaaagttttccaaagc
atctgtattcatggaaaatgtcggaacaccattggaagcttcagatgtcgttgcgacagc
gggtttgcactggataccaatgagcaaaactgcacagatattgacgagtgcaagatttct
cctgatgtttgtggtcatggcatgtgtgtgaacacactgggcagttttcagtgcaactgt
ttccctggctatgagagtggatttatgatgatgaagaactgcatggatattgatgagtgt
gaaagaaacctctcactgtgcaatggaggcacttgtgaaaacactgatggcagctacaag
tgtgtgtgtccactgggtcatcagctgtctgtggatggcagtgcctgtgaagatgtgaac
gagtgtgatctgagtagcacgttgtgtcataacggcaggtgtgtgaatgtggtggggacc
taccagtgctcctgcaactctggttaccagacaacacctgataggaaagagtgcacagac
atagatgagtgtacgatagagaatggaggatgtgagctgtactgtagtaattcggagggg
agttactactgcagctgcggtcagggatacgctctgacgccagaccaacggacatgtgca
gatgtaaatgaatgtgaagaggatgttggcatctgtgaaggtggtcagtgcattaacgtc
cctggagcatatcattgtctgtgttttgaaggattcatgacttctgcggacatgaggaca
tgcatcgatgtgaatgagtgtgaactcaacagcaacatctgtatgtttggggagtgtgag
aacaccaagggttcttatgtctgtcattgtgagatgggttacgctgtgaagaaaggaacc
tctggctgcaccgatgttaatgagtgcgagatgaacactcataactgtgacacacacgcc
acctgtgtcaacacagcaggactttaccgctgctcctgctgggacgggtggtccggtgat
ggagtcaaatgtgctgatgtggatgagtgtgcgaacaggactcacgtctgcagtgctgat
gccgagtgtgtgaacacggcaggctcgtatcgctgtgaatgttcagacggctttactggt
gacggatttacctgctcagatatggacgagtgtgctgaagatgtggatctgtgtgaaaat
ggccagtgtctcaatgttcccggcagctatcgctgtgaatgtgagatgggcttcacacac
actccgaacagcaagacctgtcgagatatagacgagtgttccttccagaacatctgtgtg
tttggcacatgtcagaatattccaggaatgtttcgctgtatttgtgataaagggtatgag
ctggacaagacaggtggaaactgcacagatgtggacgagtgtcttgatcccatcagctgt
gttaatggtcactgcgagaacacagccggctcgtaccagtgtaactgtcccattgacttt
gagctcaaccccactggaattggctgcgttgacacgcgaatagggaactgttttctggag
gtgacataccctggacgtggtgggctggcctgtagtggtgaggtggggtttggagtcagt
cgttcgtcatgctgctgttctaaaggacaggcatggggtaacccatgtgacctttgccct
ccgctcaacacctcggagtataacacactgtgtcctggaggagaggggttcaaacccaac
cccatcaccatcatcctggaagatattgatgaatgtcaggagctgcccggcctgtgccag
ggtggaaactgcatcaatacatttggaagtttccagtgtgattgcccgactggatactac
ctcaacacagacaaacgcatctgtgaggatattgatgaatgtgtgctcagttcaggggtt
tgtggtccgggcacctgctacaacacactgggaaactacacgtgtgtctgtccacaggac
tacatgcaagtgagcggaggacacagctgcatggatatgagaaaaagtctgtgttaccgt
aactacagtggtagtacctgtgaacaccagctcaaatttaacaccacacagagattgtgc
tgctgtgcctacaatgtgggaaaagcctggaacaaaccatgccaggcctgtccgagccct
ggcacaggtgactatagaagtctttgtggcagtgtgaccggattcaagattgattttgaa
actggaaaaccaaaagatattgatgaatgtcatgaaatcccaggtgtctgtgctcatggt
gtgtgtataaaccacatgggcagtttccactgcgagtgtccctcaggcttcatttacaat
gacctgctgctcatctgtgaagacattgacgaatgcagcagtggagagcatgtgtgtcag
ataaatgcagactgcatcaaccgtccgggcggctatcagtgtgaatgcgctgatgggtat
agactcacacctgacggagcctgcgctgaccgtaatgagtgtgtggagacgcccagcgtg
tgtcgtcatggtgactgtgtggacattccaggaggatacaagtgtgtgtgtcacaccggc
tttacagccacattaaaccacaggatgtgtgtagatgttaatgagtgttcacgtcagccg
tgtgggaatggcacgtgtaaaaactctattggctcttttaattgtatctgtcatcaagga
tttgatctcaccagtaataactactgtacagatattgacgagtgtgtagtttttcactct
cagctctgcaggaacggccggtgtgttaataacgtagggtccttccagtgcctctgtaga
gagggttatgaactcagtcttgatggaaagacctgcatagatgttaatgagtgtataatg
attcctggcatatgtgctcctggaacttgtctgaatctggatggttctttcagatgtgtc
tgtcctgatgggtatgtcgtccacaatgagcactgtgtagatgtgaacgagtgttcagaa
gagcccggcatctgtgcgtatggctcctgtttcaacagtctgggcagctttgagtgcgtg
tgtaaacctggatttgtgctgtcagaagatagacgcagatgttacgacactagagagagc
ttctgtttcacacgctttgagaacggcaagtgctctgtcccgcaggcattcaacaccagc
aaagccaagtgctgctgtagtgtcatggccaaagagggctggggtgacccctgtgagctg
tgccctaaagaacaggatgctgcatttcaggatctgtgtccatttggccatgggatcatt
cctggtgttggggacacacgtacttaa
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