Ctenopharyngodon idella (grass carp): 127520562
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Entry
127520562 CDS
T08802
Name
(RefSeq) peroxisome assembly factor 2
KO
K13339
peroxin-6
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127520562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127520562
Membrane trafficking [BR:
cide04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
127520562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
DUF815
RuvB_N
AAA_7
AAA_22
ABC_tran
AAA_5
AAA_33
nSTAND3
TIP49
Mg_chelatase
AAA_25
RNA_helicase
Vps4_C
NPHP3_N
AAA_24
TsaE
Parvo_NS1
AAA_28
AAA_14
IstB_IS21
AAA_17
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
127520562
NCBI-ProteinID:
XP_051764772
LinkDB
All DBs
Position
10:22807095..22831984
Genome browser
AA seq
1073 aa
AA seq
DB search
MAVPVKLQYLDDFPSHIHPLHVLINKSQFTQKFPDYTEPTYALLFSSTDKQSPSNRGFLV
CAHITPDEETDVNIHTCLAVYASRSFLKHYGLKEHSLGTVRPQSLLPLKKIVIGARTKQS
FKWASSEKFCNGLLVLASCHGQTLLARQGDSLLIPYHHLLGEEAAQVQMSDVVVLECAPV
SQGMITVDTSVVVSDCRDLDLTNTSIMSRLSFSSLFVSDFAQYANSLSSGSSLLNSKVLD
FSAFLQALECRLDIRVVHVSDLQKPGGILSRLELNEGLDIDSTIFVSKSLLLKLGVFNGE
WVIASVPADKAKKTPLAQSPVPGQRESSCKVPYKRQGRVHLAAVKAFDMVRHQDMDGNDN
VGFISPVQWFNLSDGMAVPVGNKAIKIKRWNKVSWHTESQMSASACRSAGPAFAKELHIE
AIISPDYSSHGPFDSILYKHFSIPRLVQQGNIMGIPSEGHPDLIENSSEGILRWPVLYFK
VKQVCGFSAEEEEVSSYLADSSHTSLYMGGSAHSPSPCSVLPKGSSFWTSLCPPGLSSTV
EQLVTIIQPHFTESSLTLKRGCSVLLMSPNGTGKVTVVKAASRRLHLHLIKVDCVTLCAD
TAAACEAKMKSVFERAELHHPCVLLLRNLQLLGQPRDGTETDSRVTSTLCQLITAVHASV
VVVGSVSSQRELSSDVMAAFVHQVAIESLSEEQRRTMLSSLSEDLLLGKDVNLGKIAKQT
AGFVLGDLCSLLNHAGRAAHRRLLKTYFPEAASEQEEEDLCVSGVSVTSKDFSMALDVLQ
EAHSQAIGAPKIPSVRWQDVGGLQQVKKEILDTIQLPLEHPELLSLGLRRSGLLLYGPPG
TGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIREVFSKARTAAPCIIFFDELDS
LAPNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKL
VYVGVNEDRESQLQVLKAILRRFKVDPSVCLSEVVESCPPQLTGADLYALCSDAMMCAIK
RKISLITEGEDSEAGALTLSSEDFRQALSGLQPSVSEQQLNRYKLIQHKFTTK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccctgtgaagctgcagtatcttgatgactttccatcacatattcatcctctg
catgtgcttatcaacaaatcacaattcactcaaaagtttccagactacactgaacccaca
tacgcgctgttattttcatcgacggacaagcagtcaccctctaatcggggctttttggtg
tgcgcgcacatcactccagatgaagagaccgatgtaaacattcacacgtgtctcgctgtt
tatgcgagtagatctttccttaaacactacggattgaaggagcattcactgggaacggtt
cgtccacagtccctgttgcctttaaagaagattgtgatcggtgctcggacaaagcagagc
tttaaatgggcttcttcagaaaagttctgcaatggtctgctagtcctggcgtcctgtcac
ggacagactctgttggcgaggcagggcgactcgcttctgataccctaccatcatttacta
ggtgaagaagcagcgcaggtgcagatgtcagatgtggtggtgctggagtgcgcacctgtc
agccagggcatgataacagtggacacgagtgtggtggtgtcagactgcagagatctggac
ctgaccaacactagcatcatgagcagactgtcattttcctctctgttcgtctctgatttc
gcccagtatgccaacagtttgagttctggcagctctttgttgaacagcaaagtattggac
ttcagtgcttttttacaggctcttgaatgcagacttgacatccgggtggttcatgtctca
gatcttcagaaaccaggaggaattctgtccagactagagctgaatgaaggcttggacatt
gacagcactatatttgtgagcaaaagcttgttactgaagctgggtgtatttaacggggag
tgggtcattgcatctgtcccagcagacaaggccaagaagacgcctctggctcagagtcct
gtcccgggtcaacgtgaaagcagctgtaaagttccctataagaggcaggggcgtgttcat
ctggctgcagtcaaagcctttgacatggttagacaccaagacatggatggaaatgacaac
gtggggttcatttcaccagttcagtggtttaacctgtcggatgggatggcagtacctgtt
ggaaataaggccattaaaattaagaggtggaataaggtgtcatggcacactgagtctcag
atgtccgcgagcgcgtgtcgatctgcagggccggcgtttgctaaagagctgcacattgaa
gccatcatatcgcccgactacagctcacatgggccgtttgacagcatcctctacaaacac
ttcagcatacccaggcttgttcagcaggggaatataatgggaatcccatcagaaggacat
cctgatcttatagagaacagctctgaaggaatcctcaggtggccagtgctgtatttcaaa
gtaaagcaggtgtgtggtttttctgctgaggaggaagaggtttcttcatatctggctgat
tccagtcacacttcactatacatgggaggctccgctcacagcccatctccctgctctgtg
ctgccgaagggttcgtctttctggacgagtctctgtcctcctggtctgtccagcactgtg
gagcaactggtcactatcatccaaccgcacttcactgaaagctctcttacattaaaacga
ggctgttcagttcttctgatgagtccgaacggcactggtaaagttacggtggtgaaagca
gctagcaggaggcttcatctgcatctgattaaagtggactgcgtcacactctgcgcggac
actgcagctgcttgcgaggctaagatgaagtctgtctttgagagagcagagctccatcac
ccatgtgttttgttgctaagaaacctgcagctgctcggccaaccacgggacggcactgag
acagactccagggtcacgtccaccctctgccagctcataacagctgttcatgccagcgtg
gttgtggtggggtctgtgagcagccagagagagttgtcctcagatgtgatggcagcgttt
gtgcaccaggtggcgatagagagcctgtctgaggagcagcggaggacgatgctgtccagc
ctcagtgaggacctgctgttgggaaaagatgtcaatctgggcaagatagccaaacagaca
gctggtttcgttttaggagatctttgctcacttcttaaccatgctggaagagccgctcac
agaagacttctgaagacatattttccagaagcggcgagtgaacaggaagaggaggatctg
tgtgtctctggggtgagcgtcacgtctaaggacttcagcatggcactggatgtcctgcag
gaggcgcattcacaagccattggagcgccaaaaattccgtcagtgagatggcaggacgtc
ggtggactgcagcaggttaagaaggagattctggacactattcagcttcctttggagcat
ccagagctgctctcgcttgggctgcggcgctccggtctgctgctctatgggccacccggc
actggaaaaactctgctggctaaagccgtagccaccgaatgtaccatgacctttctcagt
gtgaagggtcctgaactcatcaacatgtatgttggtcagagtgaagagaacattagagag
gtgttcagtaaggccagaactgctgctccctgtattattttctttgatgagctggactct
ttggctcctaatagaggccacagtggagactcaggaggggtgatggacagggttgtgtcg
cagcttttagcagagctcgatggtcttcattcgtctggagacgtctttgtgatcggagca
actaatcgccccgatctgctggaccaatcattgctcaggcctggcagatttgataaattg
gtgtatgttggtgtgaatgaagacagagagtcacagctgcaggttctgaaggcaatctta
cgcaggtttaaagtggatcccagcgtgtgtctgtcagaggtcgtggagtcctgccctcct
cagctgaccggagctgatctctatgcgctctgctcggacgccatgatgtgcgccatcaaa
aggaagatttcgctcatcactgaaggtgaggattcggaggctggcgctctgactctgtct
tcagaagacttcagacaggctctgtcaggccttcagccgtccgtctctgaacagcagctc
aacagatacaaactcatccagcacaaattcaccacaaaataa
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