Ctenopharyngodon idella (grass carp): 127520563
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Entry
127520563 CDS
T08802
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127520563
Membrane trafficking [BR:
cide04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
127520563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
127520563
NCBI-ProteinID:
XP_051764773
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All DBs
Position
10:22659713..22688953
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AA seq
1040 aa
AA seq
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MVHVYNCHPFASQHIVAAEQEPGLVCCGGGALFVVNAGGCKIEAYDLQQEGCPLICRFSS
MGSVLSIHHSTVGDYLVTIEEKNKATYLRAYTNWRYQAAEKTRVGVRLLGHFLRGSSFRG
APKEQMEIIEIPLFEPPLCMACCSLTGDLLVGCAKSLVIFSLKRQTLSEQLSVLDFERVL
ILHIQGWSPSQVAFCAGYVALQTELEVLVVKLTPQQKSSQAAEQHALLPEDIMTETSLDE
DAEMKKDGFSPLHEQEDFFLFPKHQEMLGNEAQECGISLVLEWTGMEAESRGDMSVVYIL
FRRFAPDFFQGCSVEETHLHSLQLHPMFTDKQEEASVSKVGEPTCMFVFFSLPNTGYMYS
LKDTVELVSTYQYPEKAHQAVLSDQFLYVITRNALQCFTVRCSAVAARLDDPYIDTTMKA
CPPFTMDVCALRIQLFIGLKFLCQDGNHIVLLTAADVDSKEDMERSARKNTESREHRTLT
GILVAVGLEPSSTPTLESLLSRSFLSRKTSISKSTEPTDSGHGWNLYVISSVSALQLYRE
IVEYSKRYEQSSPSSQSCIHLLSEGHLLLRTALLMRRDCDPAERAQLQQAFQESCAQLGD
CFSRFDKKDCHLALPYYKMSGLTVTDVIKRNVSMSSFSNGYGKGFLFFLKHSIYEETMEE
LSKDMADKVLEIFSAAEPAQLPHVVTSPSMLKADPDSAMTHLRQLEASGAPSITLSLCIA
SLALRKGDLHTYRQQMDLHAEMLQVYGFIEVPKLLLHGRGKAVLPTILAQHLHDTREGLL
VAAVIALHENSKIRLEEADLFFQELCKDGVEVESSPQLLVDFWEALLVASSHESIIQELL
FRLTSVYIDRITHRDRSGVKALKTAEDLINSCSHYGMLYPWVSILTPVQFNITHDHQEDL
HKLQSLLCGPTLEVSSILPLLEQLSDSDGNGLSVHVLCATKLGQHESSIDRLLDRCPQAI
ISYANHELQNDKLPLWWQKLFPEVCDRMRKTGNDNAVLLSALKETLVVAAKELNPLEFLE
LLPDDGTAHFFLPHLLECSQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggttcacgtctataactgtcacccgttcgcgtctcagcacatcgtagcggcggagcag
gagcctgggctggtgtgctgcggcggcggggcgctgttcgtagtgaatgctggaggctgt
aagatcgaggcatatgatctgcagcaagagggatgtccgcttatctgccggttcagcagc
atgggttctgtgctcagcatccaccacagcacagtaggggactatctagtcactattgaa
gagaagaacaaggccacttatctcagggcctacactaactggaggtaccaggctgccgag
aagactcgtgttggggtgcgtctgttgggtcactttctgcggggctcgtccttccgcgga
gctcccaaagagcaaatggagatcattgaaatccctctgtttgagccgccattgtgtatg
gcatgctgcagtcttactggtgatcttctagtgggctgtgcaaagagtttggtgatcttc
agtctgaagcgacagacactgagcgaacagctctctgtgctggacttcgagagggttctc
attcttcacatccagggctggagcccgtctcaggtggccttctgtgctggatacgtagcc
cttcaaacggagctggaggtcctggtggtgaagcttaccccgcagcagaagagcagccag
gctgcagagcaacacgcgctgctaccagaagatatcatgactgaaaccagcttagatgaa
gatgcagagatgaaaaaagatggattcagccctctccatgagcaagaggacttctttttg
ttcccaaagcatcaggagatgttgggtaatgaagcccaggagtgtggcatctctttagtt
ctggagtggactggtatggaggcggagagccgaggagacatgagcgtggtttacatctta
ttcaggaggtttgcacctgatttcttccaaggttgcagtgttgaggagacacacttgcat
tccctacagctccaccccatgtttactgataaacaggaagaagcctctgtctccaaagtt
ggggaacctacatgtatgtttgttttcttctccttgccgaacaccggttacatgtacagc
ttgaaggacaccgtggagctcgtgtccacctaccagtacccagaaaaggcccaccaggct
gtgcttagtgaccagttcctttatgtcatcaccaggaatgctctccagtgtttcaccgtc
aggtgcagtgcggtagcggctcggctcgatgacccatacattgacaccaccatgaaggcc
tgtccacccttcacaatggatgtgtgtgctctgaggatccagctcttcattggattgaag
tttctctgtcaggatggaaatcatattgttctcctgacagcagcagacgtggacagcaaa
gaggacatggagagatcagcccgcaaaaacactgaatcgagggaacacagaaccctgaca
ggcattttagtagctgtaggtctagagccgtcctcaacaccaactctggaaagccttctg
tcaaggtccttcctatccaggaagacctccatctccaaatccacagagccgactgacagc
ggtcatggctggaacctttatgtcatcagttctgtgtccgcactgcagctctacagagaa
atagtggaatacagcaagcgatatgagcaatcgagcccgtcgtctcagagctgcattcac
ctgctaagtgaaggtcacctgctcctgcggacggcactgctcatgcggcgggactgtgat
cctgcggagagagctcagctgcagcaggcctttcaggagagctgtgctcaattaggagac
tgcttcagcaggtttgataagaaggactgtcacttggctcttccgtactataagatgtca
ggcctcactgtgactgatgttatcaaaagaaatgtgtccatgagctccttttcaaacggt
tacggcaaaggatttctcttcttcctgaagcattcaatctacgaggagaccatggaggag
cttagcaaggacatggctgataaagtcctggagatctttagtgcggctgaacctgctcag
cttcctcatgttgtgaccagtccgtccatgctgaaggctgatcctgacagcgccatgacc
cacctgagacagctggaggcctccggtgccccgtccattaccttgtctctctgtatagcc
tccctggcacttcgaaagggtgacctgcacacttacaggcaacagatggacctccatgct
gagatgctgcaggtgtacggcttcatagaagtgcccaaactactgctgcacggcagaggg
aaggccgtgctgcccaccatactggcccagcacttgcacgacacacgggagggtctgctg
gtggcggcggtcatagcgctgcatgagaacagcaaaatcagactggaggaggccgatctt
ttcttccaggagctgtgtaaggatggtgttgaggttgagagcagtcctcaattactggtg
gatttctgggaggctctgttagtagcatcctctcatgaatccattatccaagagctgcta
ttccgtcttacgtctgtctatattgaccgtatcacgcacagagatcgctccggtgtcaaa
gccctcaaaacggcagaggacctgataaactcctgttctcattatggaatgttgtatcca
tgggtgagcatcctgacgcctgtccagttcaacatcacccatgaccaccaggaggaccta
cacaaacttcaatctctgctgtgcggcccaacgctggaggtctcgtccattctgcctctg
ttggagcaactttctgactctgatggcaatggtctcagcgtgcacgtgctctgtgccacc
aaactgggccaacacgagagctccatcgacagacttctagaccgatgcccacaagccatc
atctcctacgccaaccacgagctacagaacgacaaactgcctctgtggtggcagaagctt
ttccctgaggtctgtgacaggatgagaaaaacaggaaatgacaacgccgtcctcctctca
gcactcaaagaaactctggttgtggcggccaaagagttgaacccgttagagttcctggag
ttgttgccggatgatggaacggcccattttttcctgccacatctacttgaatgcagccaa
tga
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