Ctenopharyngodon idella (grass carp): 127520657
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Entry
127520657 CDS
T08802
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127520657
Cilium and associated proteins [BR:
cide03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
127520657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_11
TPR_17
TPR_14
TPR_19
TPR_9
TPR_NPHP3
TPR_6
PUB
Motif
Other DBs
NCBI-GeneID:
127520657
NCBI-ProteinID:
XP_051764995
LinkDB
All DBs
Position
10:47786957..48074095
Genome browser
AA seq
2458 aa
AA seq
DB search
MEKQGTRREKFGLFGPRALGRAVHAAAEGPGLSKAEFMEKVRQSNEACQLGDFQTAVKLY
GEALRADPQNCILYSNRSAAHLKLGQYQTALDDAVKARLLNPKWPKAYFRQGVALQYLGR
HADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFVVVSV
IGQELLTASHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTAYMQQDL
EVAKTLGDQTGECRAHGNLGSAFFSKGNYREALSNHRHQLVLAMKLKDREAASSALSSLG
HVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCHEQHL
SIAKSLGNKREEARAYSNLGSAYHYRRNFDKAMSYHTHVLELAQELEEKSIEMRAYAGLG
HAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLHKAHL
SIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTHGNLA
VAYQALGAHDRALQHYQNHLNIARELRDIQSEARALGNLGNFHCSRGEFPQAVPYYEQYL
RLSPDLQDMESEGKVCHNLGYAHYCLGNFQEAVKYYEQDLALAKDLHDKLSQAKAYCNLG
LAFKALGDYSKAEECQKYLLSLAQSLNNSQARFRALGNLGDIFLCKKDVPGAVKFYEQQL
ALAHQVKERKMEANAYAALGAAYRMLQKFDKSLGYHTQELEVYQELGDIQGECQAHGHLA
AVYMSLGKYTMAFKCYEEQLELGQRLKDPSVEAQVYGNMGITKMNMGVMEEAIGYFEQQL
AMLQQLSGNEAVLDRGRAYGNLGDCYDSLGDFEEAIKYYDQYLSVAQSLNHMQDQEKAYR
GLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGSLHSQLGNYEQAISCLE
RQLGIARDTQDRLLEGDASCGLGAVYQLMGEHDTALQFHQLDLQIAEETGSSSCQGRAYG
NLGLTYESLGNFERAVVYQEQHLSIAAQTNDLVAKTLAYSSLGRTHHALQNYSQSVMYLQ
EGLRLAEQLGRREDEAKIRHRLGLSLWASGNLEESQHQLYRASALFETIRHEAQHSTDYK
LSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYTPVT
VEHILDTVNGQRALVLYFSLAAGYLYSWLLAPGSGILKFHEVYLGEGASEGGTSDFQEGG
GGIMPSSLEQHISNAREALGVDSYYSRACSSSETESEAGDLLDQQFEELNNKLNSVTDPT
GFLRMVSRNNLFNRSCQSMTSLFSNTVSPVKEGTSSLPRRASALSKPPLRALYDLLIAPM
EGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIGSLGNT
AKVHPRRTGPVLCNGGSSMAAVVGNPRLPPSVMDRWLWGPMPSAEEEAHMVADLLGCQPL
AGPAATKERVMSALTQAECAHFATHISWKLAALVLTPSQDANSGAVAAASGGGAGGGESG
VKSNYTIPESLRVPDDASDAESICDSPPLQEFLLTAADILDLRLPTKLVVLGSYQESDSK
VTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKMFVHAFYSALLNGTKASAALADAMKT
VQSSKQFSHPSNWAGFMLIGSDVKLNSPSSLIGQALAEILQYPDKARDALRVLLHLVEKS
LQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSAGTGLPAAVFFPTTDPGD
RLQQCSTTLQSLLGLPPPALQALCKLITASETGEQLINRAVKNVVGMLHQVLVQLQSGEK
EQDFSLAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQANRRTMHFALQ
SLLALFDSTELPKRLSLDSSSSLESLASAQSVSHQLPMGYPNPPFSPPCPDSLASDAISV
YSLSSIASSMSFLSRPEGTSEFISQRSRQQELERHRGGAGLFASHRHTAVPRSRSSPHGA
VGGHDDEEYEGYSIISSEPLGSQCDTLPRPANHRNHRGAARGGAGRGYAVSVSSRGSVST
PTSPVKATLVPSPNSPFQKVGKVSSSDTGESDQSSTETDSTVKSQEERTSGAPLDPQELA
QKILEETQSHMRAVETLQRSVPLGDGMSSGGGGPPTPTGGSAFRSSETSAFSRPSSRASI
KAQSSPLPTRPKPPSRTSSLQKISSGYNSPATSETSLKEGSQPSPTSDSHAQFKLKYPSS
PYSGHISRSPSNISPSSGHQSPAGSAPSPALSYSSTGSTRSSPADAPDIDRLKLAAIDEK
VQAIHNLKTFWANATQQQHSGPMRVLRGGKLSTAKRDVLGLLNLSPRHGVAGQDSPGQDM
PLEHRNPPNGHRKLDPKRVAPSPTASTGSSPGSHPIRLPTGNGYKFLSPGRFFPSSKC
NT seq
7377 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaggaacaagacgcgaaaagtttggtctgtttggaccgcgagcgctgggc
agggccgttcacgctgcagccgagggcccgggccttagcaaggcagagttcatggagaag
gtgcggcaaagcaacgaggcctgccagctgggagacttccagaccgctgtgaagttgtac
ggcgaggctctgcgtgccgacccacagaactgcatcctttacagcaaccgctcggctgcc
cacctcaaactgggccagtaccagaccgccctggacgacgcagtcaaagcccgcctcctt
aaccctaaatggccgaaggcatacttccgacagggtgttgcccttcagtacctggggcgc
catgcggacgccctggccgccttcgcctcgggactggcccaggaccccaagagcctgcag
ctgctggtgggaatggtggaggccgccatgaagtccccgctgagagaatccctggagccc
acgtaccagcagctgcagaagatgaagctggacaagagcccctttgtggtggtgtctgtg
attggtcaggagcttctgaccgcctcccatcacggcgcttcagtggtggtcctggaggcg
gcgctgaagatcggcacctgcagcctcaaactgcgcggctctgtcttctcggccctcagc
agcgcttactggtcattgggcaacacggagaagagcaccgcctacatgcagcaggacctg
gaggtggccaaaactttaggtgaccagacaggcgaatgtcgcgctcacggaaacctgggg
tcggccttcttctccaaggggaattatcgcgaggcactgagcaaccacagacaccaactc
gtcctggccatgaaactcaaggacagagaggcggcgtcttcagccctcagcagcttgggt
catgtctacacggccatcggcgactatccgaacgccctggccagccacaagcagtgcgtc
ctgctggccaaacagtccaaggaccagctgtccgaggcccgtgagctgggcaacatggga
gccgtctacatcgccatgggtgacttcgacaatgccgtgcagtgccacgaacagcacctg
agcatcgccaagagcctcggcaacaagcgcgaggaggcgcgcgcatacagcaacctgggt
agcgcttaccactatcggcgtaacttcgacaaggccatgtcctaccacacgcatgtgctg
gagctcgcacaggagctggaggagaagagcatcgagatgagggcgtacgcagggctggga
cacgccgcccgatgcatgcaggacttggagagggcgaagcagtaccatgagcagcagctc
agcatcgcagaaggcctgaaggaccgcgccgccgagggcagggcttcatccaacctggga
atcattcaccagatgaaaggggactacgagactgctctgaagctgcataaggctcatcta
tccatcgcccaggagctaaatgactatgccgcccagggcagagcgtacggaaacatgggc
aatgcttacaacgccctcggtgcctttgaccaggccgtgcgctaccaccgacaagagctg
cagatttccatggaggttaatgatcgcgcctcgcaggcctcgacacacggaaacctggcg
gtggcgtaccaggctctaggggctcacgatcgagccttgcaacattaccagaatcatctg
aacattgcacgagagttgagggacatccagagcgaggctcgggccttgggcaacctgggt
aatttccactgctctcggggagagtttccccaagccgtaccttactacgaacagtaccta
cggctttccccggacttgcaggatatggagagcgagggtaaggtctgtcacaacttggga
tatgcgcactactgtctgggaaacttccaggaggcggtgaagtattacgagcaagacctg
gcacttgctaaggacctccacgacaagctaagtcaagccaaagcctactgcaatctgggc
ctggcctttaaggctcttggcgactatagcaaggcggaggagtgccagaagtaccttctt
tccttggcgcagtcgctaaacaactcacaggctcgattccgcgccttgggcaacctgggc
gacatcttcctttgtaagaaggacgttcccggagccgtcaagttttacgagcagcagttg
gcattggcacatcaggtcaaggaacgcaagatggaagcgaacgcctatgcagcattggga
gccgcctacaggatgctacagaagtttgacaagtccttagggtaccatacccaggaactg
gaggtgtaccaggagctgggtgacatccagggagagtgccaggctcacggacacctcgct
gcagtctacatgtctcttgggaagtacaccatggccttcaaatgctacgaggaacagctt
gaacttggtcagcgactaaaggaccccagcgttgaggcccaggtctatggtaacatgggc
atcacgaaaatgaacatgggagtaatggaagaggccattggatacttcgagcaacagttg
gcgatgttgcagcagctcagtggcaacgaggccgtgctggaccgtggtcgcgcctatggg
aacttgggagactgctatgactcgctgggagattttgaagaggcaattaagtattacgac
cagtatctctctgtggcacagagcctcaaccatatgcaggaccaggagaaggcatacaga
ggtcttggtaatggacacagggcgatggggaacctccagcagtctctggtgtgttttgag
aagcggttggtggtggcgcatgagctgggagagtgcggaggaaaagctcaggcctacgga
gagctgggcagcttgcacagccagctgggtaactacgagcaagccatctcatgcctggaa
cggcagctcggcatcgcccgtgacacccaagatcgattgctggagggtgacgccagctgc
ggcctgggcgctgtgtaccagctgatgggcgaacacgacacggcccttcagtttcaccaa
ctggacctccagatcgcagaggagacgggcagctccagctgtcagggccgggcctacggg
aacctgggactcacttacgagtctctgggtaatttcgagcgtgccgtggtgtaccaggag
cagcatctgagcatcgcggcacagaccaacgacctggtggccaaaactctggcctacagc
agtctgggacgaacacatcacgctctgcagaactactcacagtcggtcatgtacctgcag
gaaggtctgcgtctcgcggagcagctgggccgtcgggaggacgaggccaagatccgacac
cgtctggggctctcgctgtgggccagtggcaatctggaggaatcccagcaccagctgtac
cgtgcgtcggctctgttcgagaccattcgtcatgaagcccagcacagcaccgactacaag
ctctccctgttcgacctgcagacctcctcgtaccaggctctccagagggtccttgtcagc
ctcgggcaccatgatgaagccctggccgtagcggagcgcggacgcactcgggcctttgcc
gacctgctggtggagagacagacgggccagcaggactcggacccttatacgcctgtgacc
gtggagcacatcctggacactgtgaacgggcagcgggctctggtgctctacttctccctg
gcagcgggatacctgtacagctggcttctggcccccggatctgggatcctgaagtttcat
gaggtgtatctgggtgagggcgcgtcagagggcggcacgtcagacttccaggagggcggc
ggtggcatcatgccctcgtctctggagcagcacatctctaacgcccgtgaagctctggga
gtggactcatactacagcagagcgtgttccagcagcgagaccgagagcgaagctggagac
cttctggaccagcagtttgaagaactcaataataaactcaactcagtgactgacccgacc
ggcttcctgaggatggtttccagaaacaacctcttcaacaggagttgtcagagtatgacg
agtctcttcagtaacacggtgtctccggtgaaggagggcacctcgtctctgccgcgccgc
gccagtgcgctcagcaaacccccgttacgagcgctctacgacctgctcatcgccccgatg
gaggggggtctgatgcactccagcggtccggtcggcagacaccggcagctggttctggtt
ctggagggcgagctgtatctcatcccgtttgctctgctgaagggcagctcgtccaatgag
tacctgtacgagcgcttcagtctcatcgccgtaccgtccatcggcagtctggggaacacc
gctaaagttcatcctcgacggaccggtccggttctgtgtaatggaggaagctcgatggct
gcggtggttggaaaccctcggctgccgccgtcagtgatggaccgctggctttggggtccg
atgcccagcgctgaggaggaggcacacatggtggccgatctactgggctgccagccgctg
gccggccccgccgccaccaaggagcgggttatgagcgccctcacccaggccgagtgcgcc
cactttgccacgcacatctcctggaagttggcggccctggtcctcacgcccagccaggac
gccaactctggagcggtggcagcggcttctggcggaggagcaggaggtggagagagcgga
gtgaaatccaactacaccatcccagagagtctgcgtgtgccagacgacgccagcgatgct
gagagcatctgtgacagcccgccgctgcaggagttcctgctcaccgccgccgatatcctc
gatctcaggctgcccactaaactagtcgtgctcggctcgtaccaggagtccgatagtaaa
gtaactgcggacggggtggtgggtttgacgagggctttcctggccgctggagctcagtgt
gtgctggtgtctctgtggccagttcccgtcgcagcctccaagatgttcgtccacgcattc
tacagtgctctgctcaacggcaccaaagcgagcgcggctctcgcagacgccatgaagacc
gttcaaagcagcaaacagttctcacacccctccaactgggcaggctttatgctgattggc
agtgacgtgaaactgaacagcccatcatctctgattggtcaggctctggctgagatccta
cagtatccggacaaagccagagatgccctgagggttctgctacacctggtggagaaatct
ctccagcgcattcagaacggccagaggaactccatgtacacgtctcagcagagcgtggag
aataaggtgggcggcgtgccgggctggcaggctctgctgacggcggtgggattcagactg
gactcggctggaacgggcctccccgcggccgtcttcttccccaccactgaccctggagac
cgactgcagcagtgcagcaccaccctacagtcactgctgggtttgcctcctcctgctctg
caggcgttgtgtaaactgatcacggcttcagaaaccggagagcagctcatcaaccgggct
gttaaaaatgttgtgggaatgctccatcaggttttggtgcagctgcagtctggagagaag
gagcaggatttctctctcgcgcccattcaagtgtccatcagcgtgcagctctggagactt
cctggctgtcatgagttcctggctgcactggggtttgacctgtgtgaggtcggtcaggag
gaggtggtgttgaagacgggcaaacaggccaaccgtcgcaccatgcactttgctctgcag
tcactgctggcactgtttgactctactgagctgccgaagcgtctgagtctggacagttca
tcgtctctggagtctctggcctcggcgcagtctgtgtcccaccagctgcccatgggctat
cccaaccctcccttctcccctccatgccccgacagcctggcctcagacgccatctccgtc
tacagcctgagttccatcgcctcctccatgagcttcctgtcccgtcccgagggcacgtcc
gagtttatcagccagcgctctcggcagcaggaactagagcgccatcggggtggagccggg
ctctttgcatcccacaggcacacagcggtgccacgcagtcgctcgtccccgcatggagcc
gtaggaggacatgatgacgaagagtatgaaggatacagtataatcagcagcgagccgttg
ggtagccaatgcgacacgctccctcgtcccgctaaccacaggaaccatcggggcgcagcg
cgcggcggagccggcaggggttatgcggtatccgtgtcctcaagggggagcgtaagcacc
ccgacgtctccagttaaagccaccctggttcctagccccaactcgccgttccagaaggtc
gggaaggtgagcagctctgacacgggcgagtccgaccagtccagcacggagacggacagc
actgtgaaatcccaagaggagcgtacgtccggagctcctttggacccgcaggaactggca
cagaagatcctggaagagacgcaaagccacatgcgggctgtcgagactttgcagagaagc
gtcccgctgggtgacgggatgagcagcggcggtggcggtccgccaaccccgaccggaggg
tctgctttccgttcctcggagacaagcgcattcagtcggcctagtagcagagcgagcatc
aaggcgcagtcgtctccactcccgacgcgccccaaaccgccctcccgcacatcctccctc
cagaagatcagctcgggatacaacagccccgccacgtctgaaacatccctgaaggaaggc
agccaaccatcgcctacttctgacagtcacgcccagtttaaactcaagtaccccagctcg
ccctacagcggccacatctcccgctctcccagcaacatctcgcccagctcgggccaccag
tcgcccgccggcagcgctccctctccggcgctgtcctactcctcgacgggctcgacacgc
tccagtccggccgacgccccagatatcgaccgactcaaactggccgctatcgacgagaaa
gtccaagcgatccacaatctcaagaccttctgggccaatgcgacccaacagcagcactcg
ggaccaatgcgggtgctccgcggcggtaaactgagcaccgccaaacgagacgtcctgggc
cttttgaatctttcgccccggcatggagtggcgggtcaggattcgcccggccaggatatg
cctctcgagcacagaaatccacccaacggccatcgcaaactcgatccgaagagagtcgca
ccttctccgacggcttccaccggaagtagtccgggttcgcatcccatccgactgcctacg
gggaacgggtacaagttcctgtcgccaggacggttcttcccttcgtctaaatgttga
DBGET
integrated database retrieval system
