Ctenopharyngodon idella (grass carp): 127520669
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Entry
127520669 CDS
T08802
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127520669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127520669
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
127520669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Cnd3
ARM_ECM29
ALKBH8_N
Motif
Other DBs
NCBI-GeneID:
127520669
NCBI-ProteinID:
XP_051765012
LinkDB
All DBs
Position
10:complement(41674200..41709062)
Genome browser
AA seq
2786 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVSCLLSRRDDT
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPLLLQTVLSRNPNVFREKSTPTRYGVQG
GLMQQPMIPPYKMAPNSMHGSPASNYQQTTITPSPPSRYVQPQAGSGTRYIPQQNSPVPS
PYAPQSPAGYMQYSHPPSYPQHQQIQQVSVSSPIVPSGMRNIHDNKVSGQVSGNSNHNAR
HCSSDEYISIVQRLGSDESDPAMRNASFSVRSVCSPAGSEGTPKVGSRPPLILQSPPPYT
SPRDAAPDLLLDSPERKKKQKKLMKEEGGKGAMYDIVSSPTKDSTKLTIKLSRVKSSETE
QSAEPLSVLEHGSDAENELSCNSLPYHRNPQERLSAGQCLSGEQSAYQQVPVLQNTGALA
AKQPGVVSGTPYDEAELDALAEIERIERESAIERERCSKEVQDKDKPLKKRKQDSYPQEP
GAAGTAGASGTPGVGGGCNAGNKLVPQEACAASNGASRPALMVSIDLQQAGRVEGPVDSC
PVPATEAQRWPEEGSESTGVLRLKSKTDGEVQKTVDGRPEVIKQRVETTPQKTASDGRPE
TPKHKHENRREISNKVSSEKRSDISKHRHDSKPDKVRPEGKGHETSRKHEGRLESTRESK
EERHRDRDSEGSKVRRSDISKSNRVEHNRDRDQEQEKDGDKEQEKDRDKELEKNRDKELE
KDRDKEREKVRNKVREKDRNKELEKERDKELEKDQDKELEKDRDKEREKVRDKVREKDRD
KVREKDRDKVREKDRDKVREKDRDKVREKDRDKVREKDRDKERVKDRDREREKDQDKEQE
KDRDKEREKDRDRVRDRDRDQEKKRHTESTEHRDKRSPEQRSRPDSPRVKQEPRSGAESR
TKPERSVHKTSNNKDEKRNGDNKSRLDGHKPPSSDSKTAEFPNYLLGGKSGALKNFVIPK
LKRDKDGNIMQEVRRELFSEPCVKLEKLDLVEDLNKGAKPVVVLKKLSIDEVQKLISNSR
SSKSSKSKSSYGKSFGEIDSRMPLCERVKMNKRRRSATNEKPKYAEVSSDDDSSSIELAP
KRSKKDRDRTWEYEEKDRKSSGDHRRSDSRRSSGSRYRECSPADSNGDSPPPSLSDLARK
LKKKEKQKKRKAYEPKLTQDEMMDSSTFKRFSTSVDNILENLEEVDLTSLDDDEIPEELL
LGKHQLSELSSESAKIKAMGIMHKIPSDKMVKVQSILEKNIQDGAKLSTLMNHDNDRDDE
ERLWRDLIMERVTKSADACLTALNIMTSARMPKAVYIEDVIERVVQYTKFHLQNTLYPQY
DPVYRVNPHGGGTLSSKAKRAKCSTHKQRITVMLYNKVCDVISNLSELLEIQLLTDTTIL
QISSLGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRNLRN
FRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPSDKDSDDDNDRKVDQDVLITNSYETAM
RTAQNFLSVFLKKCGSKQGEDDYRPLFENFVQDLLSTVNKPDWPAAELLLSLLGRLLVHQ
FSNKQTEMALRVASLDYLGTVAARLRKDAVTSKMDQRSINRILEETSGSDEIQQLQKALL
NYLDENVETDPSLLFARKFYIAQWFRDTSTETEKAMKSQSQRDDDSSDGAHHAKDVETTS
EILQKAEARKKFLRSVIKTTASKFSSLRVNSDTVDYEDSCLIVRYLASMRPFAQSFDIYL
TQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVEL
LGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFNKITEMCVKMIR
RVNDEEGIKKLVNETFQKLWFTPTPNHDKEAMTRKILNITDVVAACRDSGYDWFEQLLQN
LLKSEEDASYKPARKACVQLVDSLVEHILKYEESLSDCENKGLTSSRLVACITTLYLFSK
IRPQLMVKHAMTMQPYLTTKCNTQSDFMVICNVAKILELVVPLMDHPSESFLTTMEEDLM
KLIIKYGMTVVQHCVSCLGAVVNKVTHNFKFVWSCFNRYYGALNKLKLQHQEDPNSTVLA
SNKPALLRSLFTVGALCRHFDFDQEEFKGSNKVVIKDKVLELLLYFTKNEDEEVQTKAII
GLGFLFIQHPGLMFASDVKNLYNCLLADRKTSVNLKIQVLKNLQTYLQEEDSRMQEADRE
WKKMSKQEDLKEMGDISSGMSSSIMQLYLKQVLESFFHTQSSVRHFALNVIALTLNQGLI
HPVQCVPYLIAMGTDSEPTMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIVGS
KDTVIRGFRQDEINTALCSHLYTMVRGNRQHRRAFLISLLNLFDDNAKSDVNMLLFIADN
LACFPFQSQEEPLFIMHHVDITLSVSGSNLLQSFKESLLKEPRPQEKKKKKRGKKYGSEE
EDESSRESSSDSDSSDDDVIRRPKKPRRAAAVNSDSDSDLDIEDVDKVMLRLPDNPNPLL
DFANASQGILLLLMLKQHLKNLYGFSDSKILKYSPTESAKVYDKAVNRKANVHFNPRQTL
DYLTNSLSNADLTYDVKRRVVRQYLDFKVLMEHLDPDEEDEEGEASASTHARNKAITALL
GGSSPKNNAADSYDDDSDADEKAPGSSRRSRRSGDSAEASGHMNATVEAKDVIAICCPKY
KDRPQIARVIQKTSTGYSVRWMAGSYSGTWAEAKKRDGRKLVPWVDTIKESDIIYKKIAL
TSAHKLTNKVVQTLRSLYAAKEGTSS
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcctatcaccactctcgctgggatcgcaagcctcacc
gacctgttaaatcagctgcctctcccctcccctttacctgccaccaccactaagagcctg
ctgtataatgggaggatcgccgaggaggtcagctgtctgctgtcccggcgggacgacact
cttgtgtcccagctggctcacagcctcaaccaggtgtccaccgagcacatagagctgaag
gacaacttgggcagtgatgacccggaaggagatgtgcctctactgctacagacggtgctg
tccaggaaccccaatgtcttcagggagaaaagtacgcccacccgatacggggttcagggc
ggtttaatgcaacagccaatgataccaccgtacaagatggcaccgaattccatgcatgga
agtccggcgtcaaactaccagcaaaccactatcactccgagccctcccagccgatatgtt
caacctcaggcgggttctggtaccaggtacattccccagcagaacagtccagtgcccagc
ccgtatgcaccacagagccccgcaggctacatgcagtacagccacccacccagctaccct
cagcaccaacagatccagcaagtgtccgtatccagtccaatagttcctagtggcatgaga
aacatccatgacaacaaggtctctggtcaagtgtcgggcaactccaaccacaatgcgagg
cattgctccagcgatgagtacatcagcatcgtccagagactcggaagtgatgagagtgac
cccgctatgcgaaatgcctccttttctgtacgctccgtctgctctcctgctggaagtgaa
gggactccgaaagttggatctcggccacccttgattcttcagtctcctccaccctacacc
tccccaagagatgctgctcctgaccttctgctggactcgcctgaacggaaaaagaagcag
aaaaagttaatgaaagaggaggggggtaaaggtgccatgtatgacattgtcagctcgccc
actaaagactccacaaagctaacgataaagttgtctcgagtgaagtcgtctgagactgag
cagtcagctgagccgttgtcggtgctagagcatggctcagacgctgagaacgagctatcg
tgcaatagcttaccataccatcgaaacccccaggagcggctctctgccggccagtgtctt
tcgggggagcagtcggcctatcagcaggttcctgtattacagaacactggggcactcgca
gccaagcaacctggggtcgttagtggaaccccatacgacgaggcagagctggacgctctt
gcagagattgaaaggattgagagggaatccgctatagaacgagaacgctgttctaaggaa
gttcaagataaagataaacctctgaagaagagaaagcaggattcgtaccctcaggaacca
ggagctgctggcactgcgggagcatctggaacacctggcgtgggtggtggatgcaatgct
gggaacaaattggtacctcaagaagcttgcgctgctagcaatggagccagtcggccggcc
ttgatggtcagtattgacctgcagcaggcaggcagggtggaagggccagtggactcctgt
cctgtccctgcaacagaggcccagcgctggccggaggaaggctccgaatccaccggggtc
ttgaggctcaaatcgaagactgatggagaggtgcagaagacagtagatggtcggccagag
gtcatcaagcaacgagtggaaaccacgccacagaaaaccgcttcagatggacgaccagag
actcccaaacacaagcatgagaaccgccgggagatctcaaacaaagtgagttcagaaaag
agatcagatatctccaagcacagacatgactctaagcctgacaaagtgaggcctgaggga
aaaggtcacgaaacttccagaaaacatgaaggacgattggagtcaactcgagagagcaaa
gaggaaaggcacagagatcgagacagtgaaggctctaaagtccgtcgatcagacatatct
aagtccaaccgggtagagcacaaccgagacagggaccaggagcaggaaaaagatggggac
aaggaacaggagaaagatcgagacaaggagctggagaaaaatcgggacaaggagctggag
aaagatcgggataaggagcgagagaaagtgcggaacaaggtgcgggagaaagatcggaat
aaggagttggagaaagagcgagacaaggagctggaaaaagatcaggacaaggagctggag
aaagatcgggacaaggagcgagagaaagttcgggacaaggtgcgggagaaagatcgggac
aaggtgagggagaaagatcgggacaaggtgagggagaaagatcgggacaaggtgagggaa
aaagatcgggacaaggtgagggagaaagatcgggacaaggtgcgagagaaagatcgggac
aaggaacgggtgaaagatcgggacagggaacgagagaaagatcaggacaaggagcaggaa
aaagatcgggacaaggaacgagagaaagatcgggatagggttcgggacagggatcgagac
caagaaaagaaacgccacacagaatcgacagagcaccgcgacaaacgttctcctgagcaa
cgctcacgccctgacagtcctcgagtgaagcaggaacctcgtagtggagcagaatccaga
acaaaacctgaacggtcagtccacaaaacttccaacaacaaagatgagaaacgaaatggc
gacaacaagagccgactcgatggacacaagcctccatcctcagacagtaaaaccgcagaa
tttcccaactacctactggggggcaaatctggtgcattaaagaattttgtcattcccaag
ttaaaacgggacaaagatggtaacattatgcaggaagtgcgacgagagttgttttccgag
ccttgtgtgaaattagaaaaattggacttggtggaggacctcaataagggtgccaaacct
gttgtggttctgaagaaactttccattgatgaggtccagaagttgatcagtaattcgcgc
agctcgaaatcaagcaagagcaaatcatcttatggcaaatcattcggagaaattgattcc
cgtatgccactgtgtgagagggtgaaaatgaataaacggagacgcagcgccactaatgag
aagcccaagtatgccgaagtcagctcagatgacgacagcagctctatagaactggcccca
aagcggtcaaaaaaggacagagacagaacgtgggaatatgaagaaaaagaccggaaaagt
tctggagatcacaggcgaagtgacagtcggagaagttcaggcagtcgatacagagaatgt
agccctgcggactcgaatggagattctccccctcccagcctgagtgaccttgccagaaag
ttgaagaagaaggaaaagcagaaaaagaggaaagcctatgagcccaaactgactcaggat
gaaatgatggactcctccacatttaagagattttccaccagtgttgacaacattcttgaa
aaccttgaagaagtggacttgacatcattagatgatgatgagattcctgaggaactgctg
ctcggaaaacaccagctctcggagttaagcagtgaatcagccaaaataaaggccatgggc
atcatgcataagattccttctgataaaatggtgaaagtccagagtattttggaaaaaaac
attcaggatggtgcaaagctctccaccctcatgaatcatgacaacgacagggacgacgag
gagcgtttgtggcgtgacctcatcatggaacgtgtcaccaaatctgctgatgcttgtctg
acggctcttaacatcatgacctcagcacgaatgccgaaggccgtttacattgaggatgtt
attgagagggtcgtgcagtacaccaagtttcatctacagaacacgctgtacccacagtat
gaccccgtctacagggtgaaccctcatggcggtggaacactaagctcaaaagccaagcga
gcaaagtgctcaacgcacaagcagagaattactgtcatgctctacaacaaagtttgtgat
gttatcagtaacctgtctgaactcctggagattcagttgttgactgacacgaccatcctt
cagatctcctctctaggtatcactccattctttgttgagaatgtgagtgaactgcagctt
tgtgccattaaactagtgacggctgtgttctctagatacgagaagcacaggcagctgatc
ctggaagagatcttcacctctcttgccagactgccaaccagcaagagaaacttaagaaat
ttcagactaaacagcagtgatgtggatggggagcccatgtacattcagatggtgacagcg
ctggttctacagctcattcagtgtgtggtccatctgccttctgataaggattcggatgat
gataatgacagaaaggttgatcaggatgtactaatcacaaactcgtatgagactgcaatg
aggacagcacaaaacttcctctctgttttcctcaaaaagtgtggtagtaagcaaggtgag
gacgactacaggccactctttgagaactttgttcaggatctactgtccacggtgaataaa
cctgattggccggctgcagagctgcttctaagccttctgggaagactgctggttcaccag
ttcagtaataagcagacggagatggctctgagagtggcctctttggattatctaggtaca
gtggccgcacgtcttcgcaaagatgccgtcaccagcaaaatggaccagcgttccatcaac
cgcatcctcgaagagacctcaggcagtgatgagattcagcagctgcagaaggctttgctg
aattacctggacgagaatgtggagactgacccgtctctattgtttgcacggaagttctac
attgcgcagtggttcagggataccagcactgagacggagaaagccatgaaatcacagagc
cagagggacgacgattcgtccgatggggcgcaccacgccaaggatgtcgagaccactagt
gagatcttgcaaaaagctgaagcacgcaagaagtttctccggtctgttatcaagaccacg
gcatcaaaattcagctcactgagagtcaactcggatactgtggactacgaggactcgtgt
cttattgtgcgatatctggcctccatgaggccgtttgcacagagctttgatatttatctc
acacagatcttgagagttcttggtgaaagtgccatagcagtgagaactaaagcgatgaag
tgtctttctgaagtggtcgcggtggatccgagcattctggcgcggtcggacatgcagcgg
ggagttcatggccgactgatggataattccaccagtgtgagagaggctgcggtggagctg
ttggggcgcttcgtactgagtcgaccccagctaaccgaacagtattacgacatgttgatc
gagcgcatcctggacacaggcatcagtgtgaggaaaagggtaattaaaatccttcgagac
atctgtctggagcagcccaccttcaacaagatcacagagatgtgtgtaaagatgatcagg
agggtcaatgacgaagaaggcatcaagaaattggttaatgagacgtttcagaagctctgg
ttcactcctacacctaatcatgataaggaggccatgactcgcaagattctcaacatcaca
gatgtggttgctgcctgcagggattctggttacgactggtttgaacagctgcttcagaat
ttgctgaagtcagaggaggacgcctcgtacaaaccggccaggaaggcttgtgttcagctg
gtggacagtcttgtagagcatattctgaaatacgaggagtcactatctgactgtgagaat
aaggggttgacgtccagtcgcttagtggcttgtattaccacgctgtacctgtttagcaag
atccgaccccagctgatggtaaaacacgccatgactatgcagccgtacctgaccacaaag
tgtaatactcagagtgattttatggtgatctgtaatgtggctaaaatcctggagcttgtt
gttcctttgatggatcatccaagtgaaagctttctcacgaccatggaagaagacctgatg
aaactcatcatcaaatacggcatgacggttgtgcagcactgtgtgagttgtctcggtgcg
gtcgtcaataaggtcacccataatttcaagtttgtgtggtcttgtttcaaccgatactat
ggagcactaaacaagctgaagttgcagcatcaggaagacccaaacagcaccgtactggcc
tctaataaacctgcactgctgcgatcactcttcactgtgggggccctgtgccgacacttt
gactttgaccaagaggagttcaaaggcagtaataaggtggtcataaaggacaaagtgctg
gagctgctgctgtatttcactaagaacgaggatgaggaggtgcagaccaaggccatcatt
ggtctagggttcctgttcatccagcacccaggcctaatgtttgcttcagatgtgaaaaac
ctctacaactgcctcctggctgacaggaaaacatcggtaaatctgaagatccaggtgcta
aagaacctgcagacctacttgcaggaggaggactcacgcatgcaggaagccgacagggag
tggaagaagatgtctaagcaggaggacttgaaggagatgggtgacatctcttctggcatg
agcagttctatcatgcagctctacctcaagcaggtgctagaaagctttttccacacgcaa
tccagcgtgcggcactttgccctcaatgtaatcgccctgacgctcaaccaaggcctcatt
catcccgtacagtgtgttccatatcttatcgccatgggaacagactcggaacccacaatg
aggaataaagccgatcaacagctggtggaaattgataagaaatacacgggattcattcat
atgaaggctgtggcggggatgaagatgtcctatcaggttcagcaagccatcgtgggttca
aaggacacagtaatcaggggtttccgacaggatgagatcaacacggctctttgctctcac
ctctacaccatggtgcgtggaaacaggcaacaccgcagggctttcctcatctcgctgctc
aacctgtttgacgacaatgcgaagtcggatgtgaacatgctgttgtttatcgcagacaat
cttgcctgcttcccatttcagagtcaggaagagccgctgttcattatgcatcatgtagac
atcacactgtctgtgtccggcagcaacctgctgcagtctttcaaagagtccttgctgaaa
gagccaagaccacaggaaaagaagaaaaaaaagagagggaaaaaatatggctctgaggaa
gaggatgagagtagcagggaaagcagcagtgatagtgatagcagtgatgatgatgtcatc
cgtcggcccaagaaacccaggcgagctgctgcagtgaactcagactctgattcagacctc
gatatagaggatgtggacaaggtgatgctacgtctccctgacaaccccaatcccttattg
gactttgccaacgcctctcagggcatcctgctgctcttgatgctcaagcagcaccttaag
aacctctacggcttctccgacagtaaaattctgaagtactcgcctacagaatctgcaaaa
gtttatgacaaggctgtaaacaggaaggccaatgtgcatttcaacccacggcagacattg
gactacctgacgaacagcctgtccaatgcagatcttacttacgatgtcaagaggagagtc
gtcagacagtatttagattttaaggtactgatggaacacttggacccggatgaggaagat
gaggagggggaggcttcagccagtacccacgcaagaaataaagccatcactgctctacta
ggaggctccagccccaagaataatgctgctgactcgtacgatgacgacagtgatgcagac
gaaaaggctcctgggtcgtcacggagatccaggagaagcggagattccgcagaggcatca
ggtcacatgaacgcaacggtagaagccaaggatgtcatcgctatctgctgccccaagtat
aaggaccggccgcagatagcacgtgttattcagaagacaagcacaggctacagcgttcgc
tggatggccggatcttactctggtacctgggcggaagccaagaaacgtgacggacgtaaa
ctggtgccttgggtggacactataaaggagtctgacattatttacaagaaaattgccttg
acgagcgcacacaaactgaccaacaaagtagtgcagactttacgttcactgtacgcagcc
aaggaaggaacttccagctaa
DBGET
integrated database retrieval system
