Ctenopharyngodon idella (grass carp): 127520770
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Entry
127520770 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127520770
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cide04031
]
127520770
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127520770
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127520770
GTP-binding proteins [BR:
cide04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
127520770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
127520770
NCBI-ProteinID:
XP_051765287
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All DBs
Position
10:28454974..28466249
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AA seq
594 aa
AA seq
DB search
MSCSHRRVIRWFSPRMAAAVGVNKQASAASMDPCVRHGRGTTANAVKVLECGVCEDVFSL
QGDKVPRLLLCGHTVCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLE
RLQNGATNQSGMSEDALREMGECVIRCDEDETHTASMYCTVCATHLCAECSQLTHSTRTL
AKHRRVPLADKPHEKMLCPQHQVHAIEFVCLEDGCQPGPLMCCVCKEYGKHQGHKHAVLE
GEANQIRASILDMAHCIRTFTEEVSEYSRKLVGIVQQIEGGEQIVEDSMGMAHTEHVPGT
AESARSCVRAYFADLHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACL
HCEKTLQQDDCRVVLAKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIG
PKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHK
LRPLWKHYYLNTQAVVFVIDSCHRDRLMESHSELAKLLTEKELRDALLLIFANKQDVPGA
VSVEEMTELLSLHKLCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgttcacaccgacgtgtcatcagatggttcagtccgaggatggccgctgctgtc
ggtgtaaataaacaggcaagcgcagcgtcgatggatccgtgtgtgcgacacggccgcgga
accaccgctaatgcggtgaaggtgttggagtgtggtgtgtgtgaggatgtgttttcacta
caaggggacaaggtgccgcggctgctgctgtgcggacacacggtgtgtcacgactgcttg
acccgtctgcctcttcacggcagggcagttcgctgcccctttgacagacaggtcacagag
ctgggagactcgggtgtgtggggcctaaagaagaactttgcgctgttagaattgcttgaa
cggctacagaatggggccaccaatcagtcaggcatgtcagaggatgcgcttcgtgagatg
ggcgagtgcgtaatccgctgtgatgaggatgagactcacactgcttccatgtactgcacg
gtgtgtgccacgcacctgtgtgccgagtgttcccagctcactcattccacccgaaccctg
gccaagcaccggcgtgtgcccctggcagacaagccccatgagaagatgctctgcccgcag
caccaggtgcacgccattgagtttgtctgcctggaagatggctgccagcctgggccgctc
atgtgctgcgtgtgcaaggagtacggaaagcatcaagggcataagcatgctgtactagag
ggtgaagccaaccagattcgagcatccatcctggatatggcacactgcatccgtacgttc
acagaggaagtgtcggagtactccaggaaactagtgggcattgtgcagcagattgaagga
ggagagcagatcgtggaggacagcatgggcatggcccacactgaacatgttccaggaaca
gcagaaagcgcccggtcttgcgtacgcgcctactttgctgatctacacgagacgttgtgc
cgtcaagaggagatggctctgagcgtggtggacgcacacgtccgagagaggctgatctgg
cttcgacagcagcaggaggacatgaccatactgctgtcacaagtgtccactgcctgtctg
cactgcgagaaaacactgcagcaggatgattgcagggtggttttggcgaaacaggagatc
aaccgactactggagacgctgcagaaacagcagcagcagtttacagagctggccgaccac
attcaactggatgcagggatccctgttactttcactaaggacaaccgtgtacacattggt
ccaaagatggagatccgggttgtgactttgggcttagatggagctggcaaaactactatt
ctcttcaaactgaagcaagatgagttcatgcagcccataccaactataggttttaatgtc
gaaactgttgaatacaaaaacctgaaattcaccatttgggatgtgggtggcaagcataaa
ctccgtccactatggaaacactactatctgaacacacaagcggtggtatttgtgattgac
agctgtcaccgagaccggctgatggagtctcacagtgaactggccaaactgttgacagag
aaagaactcagagatgctctgctgctcatcttcgccaacaaacaggacgttcctggcgcg
gtgtctgtggaagaaatgacggagctcctgagcttacacaaactgtgctgtggccgcagc
tggcacatccagggctgtgacgcccgcagcggtatgggtctacacgaggggctggactgg
ctctcacgccagctggtggccgcaggagttttggatgtggcctga
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