Ctenopharyngodon idella (grass carp): 127520814
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Entry
127520814 CDS
T08802
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127520814
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
127520814
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Gene cluster
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
127520814
NCBI-ProteinID:
XP_051765390
LinkDB
All DBs
Position
10:35305665..35311637
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AA seq
868 aa
AA seq
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MTQGFLTATPFVLLFLVEFAMAGIHLWPSMHIALSNASVFVDYNTESNFTNDRLTVSLID
IDKNETVLSRSLFNQSEGSLEFNCSCFLYASNFRFRLEQKHNIGVSNRSAIWWWSPVLHV
HWPTFHLAVDRGSNNRSSNDIRIGVYTNDHFHSCSSSKASLYLDVSYLEQVQIGRNTFEK
VQNRIRHDIKVVRAQHVEMPCASPLTERGFIKISLKSPVTQQDIKSSGPLYPSSIFAYKL
HVDNIYKSGCEGAVSVRRISPPCTVTNGKVLLYKEESNNMAPTSHMAFNFLTQGENDTEF
NCSIFDPGKNKYCFHFTLVYSQAPSLAHTCVIVQRHTKMWGPWQPWSGCSVTCGEGVRER
VRECLLPSSGGMQCTGMVREQSHCSLEDCTEELPLPSQTPPPAVSTPLAGNLVVVAGISL
CLAVILATIFITVWRKLCRAPKCSSMRRGSLHSPNGRKNSDEASICGHSMQRPSFSESLQ
AAPLQKGFTLPAKQGPSDRGVLACQQSMSLPLPLSQDPERMSPSGQKILPPIFGYRLAQQ
QLKEMKKKGLKEATKVYHVSQSPVDDTMLEATASTPAGLTPAPQELDSPEESSSSHFRIR
SPFPEPTWSPKNNALSDRQKVDLLLSPPKSATSANIRRLERTADWVEMVERSRVPYSKNP
NFRRTSSFHENNQQFPLSRPYRERSMTQVTPRQIPEGSCRSRTWEHTLPELEVWSCSSPR
MTDSSVDHRRRPWVDTPPSQSNSKDSVPVTPTKEPLVDRHHVARSPSSALDRAERAEQNW
SRRGPSPIQRNILARKLREANSSTCQRQRSSTFSTSDQRRGRCRSLPLSADYSNSPYSLT
ESEQHMMDISGYLGEDDGVEVLTIHKLT
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgacacagggtttccttacagcaaccccatttgtgctgctcttcctggtggaatttgcg
atggctggtatccatctctggccgtcaatgcacattgccttgagcaatgccagtgtgttt
gtggattacaacaccgaaagcaacttcaccaacgacagactgacagtgtcattgattgac
attgacaagaatgaaacagtgctctccaggtcgctctttaaccaatcagaagggtcactg
gagtttaactgctcctgcttcctgtatgcaagtaatttcagattcagacttgagcagaag
cacaacattggtgtgtctaacagaagtgccatctggtggtggagtcctgttctgcatgtg
cactggcccacctttcacttggctgtggatcgtggcagcaacaaccggagctctaatgac
attaggattggtgtgtacactaatgaccacttccattcttgttctagcagcaaagcttct
ctctatcttgacgtcagctaccttgaacaagtccagattgggaggaacacatttgagaag
gtgcagaaccggataagacacgatatcaaagtagttagggcacaacatgtggagatgcca
tgtgcctcccctctgacagagcgtggcttcatcaagatctccctaaaatcccctgtcacc
cagcaagacattaaatcctctggtcctctttacccttccagcatcttcgcatacaagctt
catgtggataacatttacaaaagtggatgtgagggagcagtgtctgtccgtcgaatctca
cctccctgtacagttacaaatggaaaagttctgctttataaggaagagagtaacaacatg
gcccctacttctcacatggccttcaacttcctcacgcaaggggagaatgatactgagttt
aattgctccatctttgaccccggcaaaaataagtactgcttccatttcactctcgtctac
agtcaggctcccagtttagcacacacatgtgtgattgtgcaaagacatacaaaaatgtgg
ggaccgtggcagccatggagtggttgtagtgtgacgtgtggggaaggggtgcgagagcgt
gtccgtgaatgtctgctgccctctagtggtgggatgcaatgcactggcatggttagggag
cagtctcactgttcgctagaagactgcactgaagagcttccccttccatcccagacacca
ccgccagctgtaagcacgcccctagctgggaatctagtggtagtggctgggatttccctg
tgcctggctgtgattctggccaccatctttattacagtgtggagaaaactctgccgtgct
ccaaagtgcagctccatgcgccgtggctctctgcactctcccaatggccgaaaaaactct
gatgaagcttctatctgtggtcacagcatgcagagacccagtttctctgaaagtctccag
gcagctcccctacagaagggatttaccttgcctgccaagcagggaccttcggaccgaggt
gtgttggcttgtcaacagagcatgtcccttcctcttcccctttctcaagacccagagaga
atgtctccttctggccaaaagatccttccccctatttttggctatcgcttagctcagcag
cagctcaaggagatgaagaagaagggcttaaaagaggccactaaagtctaccatgtgtcc
cagagtccagtcgatgacaccatgctagaggcaacagcttcaacccctgccggtctaact
ccagcgccccaagaacttgacagcccggaagagtcaagcagcagccacttccgcataagg
tctccctttccagaacctacgtggtctcccaaaaacaatgctttatcagatagacaaaag
gtggatttgttgctgagtccgccgaagtctgcaaccagtgccaacatccgtcgtcttgag
cgcacggcagactgggtagagatggtagagcgcagtagagtgccctactccaagaatccc
aatttcaggagaacctcaagtttccacgagaacaaccagcagtttcccctgtcccgaccc
taccgagagagaagcatgacccaggtgactcctcgccaaataccagaggggagctgtaga
agcagaacctgggagcatacgcttcctgaacttgaggtctggtcttgttccagtcctaga
atgactgatagctcagtggaccacaggagaagaccatgggttgacactcctccatctcaa
tcaaactcaaaagattcagttccagtgacaccaacaaaagagcctttggtggatcgtcat
catgtggctcggagcccatcttctgccctggaccgagctgaacgggcagaacagaactgg
agcagaagaggtccctcgcccatccagaggaacatactagccaggaagctacgagaggct
aattcatctacctgccaaaggcaacgcagttccacattctctacctcagaccagcgcagg
ggacgctgtcgcagccttcctctctctgcggactacagcaactccccatatagtctcaca
gaatcagagcagcacatgatggacatttctggatacttgggtgaggatgatggagtagaa
gttctgactattcataaacttacctga
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