Ctenopharyngodon idella (grass carp): 127520849
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Entry
127520849 CDS
T08802
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b
KO
K10839
UV excision repair protein RAD23
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03420
Nucleotide excision repair
cide04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127520849
09124 Replication and repair
03420 Nucleotide excision repair
127520849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cide03051
]
127520849
03400 DNA repair and recombination proteins [BR:
cide03400
]
127520849
Proteasome [BR:
cide03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
127520849
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
127520849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Dsc3_N
UBA_2
Radical_SAM
CUE
Ubiquitin_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
127520849
NCBI-ProteinID:
XP_051765464
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Position
10:complement(2604684..2614390)
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AA seq
414 aa
AA seq
DB search
MLTITLKTLQQQTFKVQIDEELTVKALKEKIEEEKGQDAFPAVGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKPKSATPPQAPAPVSASLAETPVHQPTAPAAPPTASTVPVSTPA
PAPVEPAASAEPATLPVTVPPAASEAAAETPEPVSATPAPISEEENQAAQEEQAIAQSEA
SIIDELGLLEAAASILVTGQAYENLVTEIMSMGYEREQVIAALRASYNNPDRAVEYLLMG
IPTESEQPPQEVVRPTAVPNPTPPAPQRPQPPPTATAGAESGAAQPTANPLEFLRNQPQF
QQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPQPGEAGAAEAPAAP
QTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDDE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatcactctgaagacgctccagcagcagacgtttaaagtgcagatagatgag
gaactgacggtaaaggctcttaaagagaagatagaggaagaaaagggtcaagatgctttt
ccagctgtcggtcaaaaactaatctatgcaggcaaaattttgaatgacgatatacctcta
aaagaatacaaaatagatgagaagaactttgtcgtggtgatggttacaaagcccaaatct
gcaacaccaccacaagctcctgctcccgttagcgcgtccctcgccgaaacccccgtccat
cagcccacggctcctgctgcgcctcctactgcctccacagtgcctgtatcaacccctgct
cccgctcctgtagaaccagcggcgtcagcggagccggccacgctgcctgttacagtgccc
cctgctgcctcggaggctgctgcggaaacgccagagccagttagcgccactcctgctccg
atctcagaagaggagaaccaggccgcccaagaagagcaggccatcgcccaatcagaggcc
agcattatagatgagttgggtcttttagaagcggctgcatccatactagttacgggtcaa
gcatatgagaatttggtgacggaaatcatgtcaatgggttacgagagggagcaggtgatc
gccgccttacgagcaagttacaacaatccggacagagccgtagagtacctgcttatgggt
attcccacagaatccgagcagccgccacaggaagtagttcggcccactgccgtgcccaac
cccacccctcccgcaccacagcgacctcagcctccgcccaccgccacagccggtgcggag
tccggagccgcgcagccgacggcaaacccgcttgagttcctgaggaaccagccacagttc
cagcagatgcggcagatcatccaacagaacccggcgctcctgccggcactgctgcagcag
ctgggccgagacaacccgcaactcctgcagcaaatcacgcagcatcaggagcggtttgtg
cagatgttgaacgagccgcagccaggcgaggccggagccgccgaagcccccgccgcccca
cagacgaactacattcaggtcacgccgcaggagaaggaagccatcgagaggttaaaagcc
ctagggtttcccgagggactcgtcatccaagcctacttcgcctgcgagaagaacgagaac
ctcgccgcaaacttcctgctccagcagaactttgacgatgagtga
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integrated database retrieval system
