KEGG   Ctenopharyngodon idella (grass carp): 127520902
Entry
127520902         CDS       T08802                                 
Name
(RefSeq) integrin alpha-2-like isoform X1
  KO
K06481  integrin alpha 2
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03271  Virion - Rotavirus
cide04145  Phagosome
cide04510  Focal adhesion
cide04512  ECM-receptor interaction
cide04810  Regulation of actin cytoskeleton
cide04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    127520902
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127520902
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127520902
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127520902
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127520902
   04810 Regulation of actin cytoskeleton
    127520902
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127520902
   04515 Cell adhesion molecules [BR:cide04515]
    127520902
   04090 CD molecules [BR:cide04090]
    127520902
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   127520902
  Exosomal proteins of bladder cancer cells
   127520902
Cell adhesion molecules [BR:cide04515]
 Integrins
  Integrin alpha subunits
   127520902
CD molecules [BR:cide04090]
 Proteins
  127520902
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 FG-GAP_3 ITGAX-like_Ig_3 Integrin_alpha DUF1194
Other DBs
NCBI-GeneID: 127520902
NCBI-ProteinID: XP_051765574
LinkDB
Position
10:complement(29878243..29929852)
AA seq 1211 aa
MDRMEKVVILLILLQSFCIARTLSFNVGTAGAKIFSSGPGVQEFGYTVRQLSSNQGKWLL
VGSPWSGYPQNRKGDLYKCDTGPRNNCQKLNLQDSISVDGVQSINMNMSLGLTITPIAKP
NRFLTCGPLWAQRCGSQYFYPGVCAELSPQFTLQPAFSPAIQTCGGPMDVAIVLDGSNSI
YPWPEVINFLVKLLENLDIRPDQTRVSIMQYSEDLSFLYHFNSDQNKEKVLSAASAINQK
TGVETNTFAALDNARQTAFLRENGGRAGATKVLVVVTDGESSDGHRGQEVIERLNRDGII
RFGIAILKKSANIQKFIKEIELIASTPTENYMFNVSSEEALINIAGTLGDRIFNIEGTSQ
GQEFQLEMSQVGFSAHQTNKKDEIMLGAVGAYGWTGTVIHQTAGKSHIFLKNAFEKTLDD
RNHSSLLGYSVSSVTDGSSEFYVAGAPRAVHRGQVVVYTINSQGQPVIINSQRGDQIGSY
FGSVLCPVDVDIDGVTDLLLVGAPMYMSEEKSETGRVYLFTITKGILSNQGFLEGSQKNG
RFGTAITVIPDLNMDGFSDVVVGAPMEGNGQGAIYVYYGDGKTIRKQSSQKIIGTKLDPA
MKYFGRSLDGRGDMNEDSIPDVTVGAFGKVVQLWSRAVAVVTAKVSFTPDKISILSKPCR
YSGRQVSCFKAKVCFSATFKPMNPLGPVDIKYNLSLDADLQSSRISPRGHFSNMDRVIQK
DISVSAKDICEEHDVYVQETPDLVNSIALRVDVVLSSTDAKTVLDIFSPNAWEFFIPFSK
DCGQDEVCFSDLVLTVESEQKLGSSKSPLVVSQNKKRLSFTVTVMNRKENAYNARVSVIY
SRNLFYASFTPLIDGTEVKCTLMKDSDTLTCQVSYPALRTDQLVTFVVNFDFNMNQLLND
ASVVFEALSDSTEETPADNRISVSIPVQYNSEIILSRESNLGVYLLEKEDNFATTVKDYK
DIGPDFNFNIKVSTGTVPVSLIYLNVSLPSSTRAGNPLLYTTSIKTSPAEKIHCADSHQI
DPFKISQKPYTAQFTEESFRGTEELNCKTATCWSMKCVLKDLEGKNDYYVNVTTNIWNGT
FAMADFLYVVLSVRADIETSQPDLLFIEQKNLKVEVKVSKPGAKGDVPVGVIAGSVIGGL
LLLALAVALLWKVLYLPFFHIVYSVYILSFSFKNQCVYIQFGFFKRKYQSLMKNDENAAE
HQELQENSEAP
NT seq 3636 nt   +upstreamnt  +downstreamnt
atggacaggatggaaaaagttgtgatactactgatattattgcagagtttctgtattgct
cgcactctgagttttaatgtaggaactgcaggtgccaaaatcttctcatctggtcctggg
gtacaagagtttggctacactgtacgacagttgagcagtaatcaaggaaaatggctgctg
gtaggctctccctggagtggataccctcagaatagaaaaggagacctctataagtgtgac
actggtccaagaaacaactgccagaaactaaaccttcaagactctatcagcgtagatggt
gtgcagagcatcaacatgaacatgagcctgggtctgactatcactccaatagccaaacct
aacagatttctgacatgtggtcctctgtgggcccagcgctgtggcagtcagtacttctac
ccaggagtctgtgctgaactgagcccacagtttacacttcagccggccttctctcctgcc
attcaaacttgtggtgggccaatggatgttgccattgttttggatggatcaaacagtata
tatccatggcctgaagttataaactttctcgtaaagcttttggaaaatcttgatatcaga
ccagatcaaactcgagtcagtattatgcagtattcagaggatttgtcctttctttatcat
tttaattctgaccaaaataaagaaaaagttctttcagcggcttctgctattaaccaaaaa
actggagtagaaaccaacacttttgcggcacttgacaatgccagacaaacagctttccta
cgggaaaatggtggccgtgcaggtgccactaaggtgttggtagtggtgacggatggagaa
tcttctgatggtcatagaggtcaagaggtcattgagagattaaacagagatggcatcatt
cgctttggcattgctattctcaagaaaagtgccaatattcaaaagttcatcaaggagatt
gaattgatcgctagcactccaacagagaactacatgttcaatgtatcatcagaggaagct
ctaatcaatatcgcaggaactctgggggacagaatctttaacattgaaggcacaagtcaa
ggtcaagaattccaattggagatgtcccaagttggattcagcgcacaccaaaccaataaa
aaggatgagattatgctgggtgctgtcggagcatatggatggaccgggaccgtcatccat
caaacagctggaaaatcacacattttcctcaaaaatgcttttgagaaaacccttgatgac
agaaaccacagctcattactcggttactctgtcagctctgtgactgacggctcgtctgag
ttttatgtggccggagctcctcgtgccgttcatagaggacaggttgtagtttacactatc
aacagccagggacaacctgtcatcataaattcacagagaggagatcagatcgggtcttat
tttggcagcgttctctgtcccgttgatgtggacattgatggtgtgactgatctgctgctg
gttggagctccgatgtacatgagcgaggagaagtctgaaacaggacgagtctacctgttc
accattaccaagggtatcttgagtaaccagggttttttggagggttctcaaaagaacggt
cggtttgggacggccatcactgtcatcccagatctgaacatggatggcttcagtgacgtg
gtggttggtgccccaatggaaggcaatggccaaggtgccatttacgtctactatggagac
ggaaaaaccatcagaaagcagagctcacagaaaattattggaacgaaactggacccagcg
atgaagtacttcggccgttctctagacggcagaggagatatgaatgaagactcaatccca
gatgtcacggtgggggcttttgggaaagtcgtccaactctggagtagagcagttgcagtg
gtcacagccaaggtttccttcacccctgataagattagtatcctgagtaaaccgtgtcgc
tatagtggaaggcaggtgtcctgcttcaaggctaaagtgtgtttcagtgcaacatttaaa
ccaatgaatccactggggccagtggatatcaagtacaacctgagcctggatgctgacctg
cagtcttctcggatcagccctagaggtcatttcagcaacatggatcgggtcatccagaaa
gacatcagcgtctctgcgaaggacatatgtgaagagcatgatgtctatgtgcaggagact
cctgaccttgtcaactcaattgctttgcgtgtggatgtagttctcagctctacagacgca
aaaactgttttagacatcttcagtcctaatgcgtgggagttttttatcccattctcaaag
gactgtggccaagatgaagtttgcttcagtgacttggtactgactgtggagagtgaacag
aaacttggttctagcaaaagtccactggtggtcagccagaacaagaaaagactctccttc
actgtgacagtgatgaacaggaaggaaaatgcgtacaatgcacgtgtgtcagtcatctac
tccagaaacctgttctacgcttcttttacaccactgattgatggaacggaggtgaagtgc
actctgatgaaagactcagacacactcacctgccaagtgagttatccagccctgaggaca
gaccaattggtaacatttgtggtaaactttgactttaatatgaatcagcttctaaatgat
gccagtgttgtctttgaagctttaagtgacagcacagaggaaactccagctgataataga
atctctgtctccattcctgtccaatacaactctgagatcatcctcagcagagaatcaaac
ttaggtgtttatttactggaaaaagaggacaattttgcaaccacagtgaaggattacaag
gacatcggcccagattttaactttaatataaaggtttctacaggaactgtcccagtcagc
ctcatttacctcaatgtctctctgcccagcagcactagagcaggaaatccgctcctgtat
acaaccagcattaaaacttcacctgctgaaaaaatccattgtgcagacagccatcagatt
gacccttttaagatcagtcaaaaaccttatacagcccaattcacagaagagagttttaga
ggaacagaggaactgaactgcaaaacggccacatgctggtcaatgaaatgcgtcctgaag
gacctggaggggaaaaatgattactatgtgaatgtaactacaaacatatggaatggcacc
tttgcaatggctgatttcctgtacgttgtgctctctgtgagagctgatatagagacgtct
caaccagacctactgttcatcgaacagaaaaaccttaaggttgaagtcaaagtgagcaaa
cctggagctaaaggggatgttccggtgggcgtcattgcagggagtgttatcggcggtctg
ttattattggctcttgcagtcgcattgctttggaaggtgctttatttaccttttttccac
attgtctattcagtgtacatcttgtcattttcttttaaaaaccaatgtgtttacattcag
tttggattcttcaagaggaagtatcaatcgctgatgaagaatgacgagaatgcagcagaa
catcaggaactgcaggaaaacagtgaggcgccctaa

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