Ctenopharyngodon idella (grass carp): 127520902
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Entry
127520902 CDS
T08802
Name
(RefSeq) integrin alpha-2-like isoform X1
KO
K06481
integrin alpha 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03271
Virion - Rotavirus
cide04145
Phagosome
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
127520902
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127520902
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127520902
09144 Cellular community - eukaryotes
04510 Focal adhesion
127520902
09142 Cell motility
04820 Cytoskeleton in muscle cells
127520902
04810 Regulation of actin cytoskeleton
127520902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127520902
04515 Cell adhesion molecules [BR:
cide04515
]
127520902
04090 CD molecules [BR:
cide04090
]
127520902
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127520902
Exosomal proteins of bladder cancer cells
127520902
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin alpha subunits
127520902
CD molecules [BR:
cide04090
]
Proteins
127520902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
DUF1194
Motif
Other DBs
NCBI-GeneID:
127520902
NCBI-ProteinID:
XP_051765574
LinkDB
All DBs
Position
10:complement(29878243..29929852)
Genome browser
AA seq
1211 aa
AA seq
DB search
MDRMEKVVILLILLQSFCIARTLSFNVGTAGAKIFSSGPGVQEFGYTVRQLSSNQGKWLL
VGSPWSGYPQNRKGDLYKCDTGPRNNCQKLNLQDSISVDGVQSINMNMSLGLTITPIAKP
NRFLTCGPLWAQRCGSQYFYPGVCAELSPQFTLQPAFSPAIQTCGGPMDVAIVLDGSNSI
YPWPEVINFLVKLLENLDIRPDQTRVSIMQYSEDLSFLYHFNSDQNKEKVLSAASAINQK
TGVETNTFAALDNARQTAFLRENGGRAGATKVLVVVTDGESSDGHRGQEVIERLNRDGII
RFGIAILKKSANIQKFIKEIELIASTPTENYMFNVSSEEALINIAGTLGDRIFNIEGTSQ
GQEFQLEMSQVGFSAHQTNKKDEIMLGAVGAYGWTGTVIHQTAGKSHIFLKNAFEKTLDD
RNHSSLLGYSVSSVTDGSSEFYVAGAPRAVHRGQVVVYTINSQGQPVIINSQRGDQIGSY
FGSVLCPVDVDIDGVTDLLLVGAPMYMSEEKSETGRVYLFTITKGILSNQGFLEGSQKNG
RFGTAITVIPDLNMDGFSDVVVGAPMEGNGQGAIYVYYGDGKTIRKQSSQKIIGTKLDPA
MKYFGRSLDGRGDMNEDSIPDVTVGAFGKVVQLWSRAVAVVTAKVSFTPDKISILSKPCR
YSGRQVSCFKAKVCFSATFKPMNPLGPVDIKYNLSLDADLQSSRISPRGHFSNMDRVIQK
DISVSAKDICEEHDVYVQETPDLVNSIALRVDVVLSSTDAKTVLDIFSPNAWEFFIPFSK
DCGQDEVCFSDLVLTVESEQKLGSSKSPLVVSQNKKRLSFTVTVMNRKENAYNARVSVIY
SRNLFYASFTPLIDGTEVKCTLMKDSDTLTCQVSYPALRTDQLVTFVVNFDFNMNQLLND
ASVVFEALSDSTEETPADNRISVSIPVQYNSEIILSRESNLGVYLLEKEDNFATTVKDYK
DIGPDFNFNIKVSTGTVPVSLIYLNVSLPSSTRAGNPLLYTTSIKTSPAEKIHCADSHQI
DPFKISQKPYTAQFTEESFRGTEELNCKTATCWSMKCVLKDLEGKNDYYVNVTTNIWNGT
FAMADFLYVVLSVRADIETSQPDLLFIEQKNLKVEVKVSKPGAKGDVPVGVIAGSVIGGL
LLLALAVALLWKVLYLPFFHIVYSVYILSFSFKNQCVYIQFGFFKRKYQSLMKNDENAAE
HQELQENSEAP
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggacaggatggaaaaagttgtgatactactgatattattgcagagtttctgtattgct
cgcactctgagttttaatgtaggaactgcaggtgccaaaatcttctcatctggtcctggg
gtacaagagtttggctacactgtacgacagttgagcagtaatcaaggaaaatggctgctg
gtaggctctccctggagtggataccctcagaatagaaaaggagacctctataagtgtgac
actggtccaagaaacaactgccagaaactaaaccttcaagactctatcagcgtagatggt
gtgcagagcatcaacatgaacatgagcctgggtctgactatcactccaatagccaaacct
aacagatttctgacatgtggtcctctgtgggcccagcgctgtggcagtcagtacttctac
ccaggagtctgtgctgaactgagcccacagtttacacttcagccggccttctctcctgcc
attcaaacttgtggtgggccaatggatgttgccattgttttggatggatcaaacagtata
tatccatggcctgaagttataaactttctcgtaaagcttttggaaaatcttgatatcaga
ccagatcaaactcgagtcagtattatgcagtattcagaggatttgtcctttctttatcat
tttaattctgaccaaaataaagaaaaagttctttcagcggcttctgctattaaccaaaaa
actggagtagaaaccaacacttttgcggcacttgacaatgccagacaaacagctttccta
cgggaaaatggtggccgtgcaggtgccactaaggtgttggtagtggtgacggatggagaa
tcttctgatggtcatagaggtcaagaggtcattgagagattaaacagagatggcatcatt
cgctttggcattgctattctcaagaaaagtgccaatattcaaaagttcatcaaggagatt
gaattgatcgctagcactccaacagagaactacatgttcaatgtatcatcagaggaagct
ctaatcaatatcgcaggaactctgggggacagaatctttaacattgaaggcacaagtcaa
ggtcaagaattccaattggagatgtcccaagttggattcagcgcacaccaaaccaataaa
aaggatgagattatgctgggtgctgtcggagcatatggatggaccgggaccgtcatccat
caaacagctggaaaatcacacattttcctcaaaaatgcttttgagaaaacccttgatgac
agaaaccacagctcattactcggttactctgtcagctctgtgactgacggctcgtctgag
ttttatgtggccggagctcctcgtgccgttcatagaggacaggttgtagtttacactatc
aacagccagggacaacctgtcatcataaattcacagagaggagatcagatcgggtcttat
tttggcagcgttctctgtcccgttgatgtggacattgatggtgtgactgatctgctgctg
gttggagctccgatgtacatgagcgaggagaagtctgaaacaggacgagtctacctgttc
accattaccaagggtatcttgagtaaccagggttttttggagggttctcaaaagaacggt
cggtttgggacggccatcactgtcatcccagatctgaacatggatggcttcagtgacgtg
gtggttggtgccccaatggaaggcaatggccaaggtgccatttacgtctactatggagac
ggaaaaaccatcagaaagcagagctcacagaaaattattggaacgaaactggacccagcg
atgaagtacttcggccgttctctagacggcagaggagatatgaatgaagactcaatccca
gatgtcacggtgggggcttttgggaaagtcgtccaactctggagtagagcagttgcagtg
gtcacagccaaggtttccttcacccctgataagattagtatcctgagtaaaccgtgtcgc
tatagtggaaggcaggtgtcctgcttcaaggctaaagtgtgtttcagtgcaacatttaaa
ccaatgaatccactggggccagtggatatcaagtacaacctgagcctggatgctgacctg
cagtcttctcggatcagccctagaggtcatttcagcaacatggatcgggtcatccagaaa
gacatcagcgtctctgcgaaggacatatgtgaagagcatgatgtctatgtgcaggagact
cctgaccttgtcaactcaattgctttgcgtgtggatgtagttctcagctctacagacgca
aaaactgttttagacatcttcagtcctaatgcgtgggagttttttatcccattctcaaag
gactgtggccaagatgaagtttgcttcagtgacttggtactgactgtggagagtgaacag
aaacttggttctagcaaaagtccactggtggtcagccagaacaagaaaagactctccttc
actgtgacagtgatgaacaggaaggaaaatgcgtacaatgcacgtgtgtcagtcatctac
tccagaaacctgttctacgcttcttttacaccactgattgatggaacggaggtgaagtgc
actctgatgaaagactcagacacactcacctgccaagtgagttatccagccctgaggaca
gaccaattggtaacatttgtggtaaactttgactttaatatgaatcagcttctaaatgat
gccagtgttgtctttgaagctttaagtgacagcacagaggaaactccagctgataataga
atctctgtctccattcctgtccaatacaactctgagatcatcctcagcagagaatcaaac
ttaggtgtttatttactggaaaaagaggacaattttgcaaccacagtgaaggattacaag
gacatcggcccagattttaactttaatataaaggtttctacaggaactgtcccagtcagc
ctcatttacctcaatgtctctctgcccagcagcactagagcaggaaatccgctcctgtat
acaaccagcattaaaacttcacctgctgaaaaaatccattgtgcagacagccatcagatt
gacccttttaagatcagtcaaaaaccttatacagcccaattcacagaagagagttttaga
ggaacagaggaactgaactgcaaaacggccacatgctggtcaatgaaatgcgtcctgaag
gacctggaggggaaaaatgattactatgtgaatgtaactacaaacatatggaatggcacc
tttgcaatggctgatttcctgtacgttgtgctctctgtgagagctgatatagagacgtct
caaccagacctactgttcatcgaacagaaaaaccttaaggttgaagtcaaagtgagcaaa
cctggagctaaaggggatgttccggtgggcgtcattgcagggagtgttatcggcggtctg
ttattattggctcttgcagtcgcattgctttggaaggtgctttatttaccttttttccac
attgtctattcagtgtacatcttgtcattttcttttaaaaaccaatgtgtttacattcag
tttggattcttcaagaggaagtatcaatcgctgatgaagaatgacgagaatgcagcagaa
catcaggaactgcaggaaaacagtgaggcgccctaa
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integrated database retrieval system