Ctenopharyngodon idella (grass carp): 127520957
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Entry
127520957 CDS
T08802
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127520957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127520957
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
127520957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
127520957
NCBI-ProteinID:
XP_051765680
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All DBs
Position
10:complement(41733265..41753033)
Genome browser
AA seq
1695 aa
AA seq
DB search
MSASEAADGSSTGLCPSFAVICSFLERYGALLDLPEVSFPMLERSLQESSAVPKLLVDLH
VKLLRKIGKSVSADRWEKNLIKICQEFNSTWAWELEKKGYREMTVECKTGILKYLCESQF
DDNVKFKTAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRVYVEEQDDLDGSSWKCI
VRDRNDLAQILGLLKTQIDPALLVKKDQEEGSSSNSPNPDDEENKKKAGAEVEVRDEKSQ
DDLSTSESKENILEQENTKQEDSEATDALSEKGLKVKEELQKHSETSNCTGVIAGSIKEE
PQDEEEKVKDLSTPSQTAEQMEDVKRKTLEETQRTLKNDHQAKIPLKKREMKLTEDFDGN
SAGVRNASVAPVKESRTCFDDNRLSAEKINGHVPHIKPSESETQKGSESFQKETTENDSE
NLPRVSDESNERKKETKDDQTEDKTGTNETRLCAEEQMEVEKPGESCAATADENKAKSEA
PQPHKKISGEEKLSTVSEQSKKKPGSEKVTENKKSPACENMETTEANTSTLPEESTKDLS
KEESMQDLSKKEAKKDHLQEAKKGLSKQQTVKDLPNKESSKDLAREESMENLPKDLPKEQ
SMKDLSKEGSSKKETIKNLPNEESKKEEESQKVLTEESQKSPKDSDNSNKALEKQDPTAS
MAIETEPFQSSKMEESSSHEVIKPHSGTKKPQNTEETKTHHSSADTTTEKESAAPVSKTE
KQYMSEADKLSTKGESQSIASKPSEDTGGPQDKAQEQSASKSASRDPEKSSVSDSTRKPS
TPKTTEKVDGEEKCDTAETDKNENSEATKEKDAKGEHANSSEESAAKKLVKEVKTSEEPN
EPNSSEKPPSEREHEKEPDSEKGNKEKQMEVDSEITKSDEVQLAVKEVCETSRARKKKTD
VPVDQSTTSSKQSEQEATSEQSEASGDVHEKSNTALRSSKRAGRPPKKSQESQDEDKTGE
EQEEKTDLQQEAIRMKIKIPAHRRKAELQKEEVKGDSESETTEGRCLRRSPRICRPTAKA
VEIQDRRAERKQAPPVSEKEKDEKEKDDNEEKEDEESVQRKPKKAEPDGQTKPKVGRRRK
RQPWSRMRRKKKCSEDDEEEEEESESEEEETEEDDSDEDYKVEKTRKRRRNRKRERNSSD
SSTSSSEDDQPNDDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC
QHKQLCDRLEEQLLNLDAALKKKERAERRKERLVYVGISVENIITPSVEVEEEKEEEVVN
EKETKKSKSWGRRSTRAKKYISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDMANITGH
RGKDISTILQEDGKENGRPRRPSAAQKKKRRRLNDLDSDSTVDEEESEDEFRLSDSSSEE
EEFVASDNEAESEAEAPSLDDSDFGSDAEGPQIKTSNRRAASRCRNRRQPPRRRRRPRGY
SDEEELETDEEEEEDEMVTEGSSEFSDSDLDIRYRRSYRSRKQQVNYCESSDTDGSQAST
NRDKKKRRRLSSSDSEVSFQSAESDEEDRKPKKIRVDSSEEESRKRRRRLSLKRRRESED
DDEDGDDSDESEEEERPVRKRVNRIDSDDSEGEEEEEEVKKSPLEKETEETVGKGPSPLD
YNLVELPPTNGQSPMKGLEGLMPRPGVGVTPKNGNAPSAVTIAPNGLEIPAQDEDEDDLL
GVTDLVDYVCNSEQL
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcggaggcagcggacggttcttccacgggattatgcccgagcttcgccgtg
atctgctcgtttctggagcggtatggagctctgctggacctgccggaggtgtcgttcccg
atgctggagcgcagtctgcaggagagcagcgcggtacccaaacttctcgtggaccttcac
gtgaagttgctgaggaaaattggcaagtctgtgtctgcagacagatgggagaagaatctc
attaagatctgtcaggagtttaactccacatgggcatgggagctggaaaagaagggttat
cgagagatgacagtggagtgtaagacaggaatactgaagtatttatgtgaaagccagttt
gatgacaatgtcaagtttaagaccgctatcaatgaagaggacccagataaaatgcgtctt
cagcccatcggcagagacaaagatggcctcatgtactggttccagctagaccaagaccat
aatgtgagggtctatgtggaagaacaggatgatctggatgggtcatcctggaagtgtata
gtaagagatagaaacgacctggctcagatccttggtctgttgaagactcagattgatcca
gcgctcctagtaaagaaggatcaggaggagggctcgtctagtaacagtccgaacccagac
gatgaggagaacaagaagaaagcgggagctgaagtggaggtcagagatgaaaaatcgcaa
gatgatttatccacatctgaaagtaaggaaaacatcttggagcaagaaaatacaaagcaa
gaagattcagaggccacagatgctttgtcggaaaagggcttgaaggtgaaggaagagttg
cagaaacattcggagacgtcaaattgcactggcgttattgctggatctatcaaagaagag
ccacaggatgaggaggagaaagtcaaggacttgtcaacaccttcacagactgcagaacag
atggaggacgtgaagagaaaaaccttagaagagactcaaagaactttgaaaaatgaccat
caagctaaaatccctctgaaaaagcgagagatgaaactaaccgaagactttgatggcaac
agtgcaggagtacgaaatgcatctgtcgctccggtgaaagaatcacggacatgtttcgat
gacaacagattgagtgctgaaaagatcaacggccacgtccctcacattaaaccatctgag
agtgaaacacaaaaaggttcagagagttttcaaaaagaaacgacagagaatgattcagaa
aatctccctcgtgtctcagatgaatccaatgagagaaaaaaggagaccaaggatgaccag
acagaagataagacgggcaccaatgaaaccagattgtgtgctgaagagcagatggaagtg
gagaagcctggggaatcctgtgcagccactgcagatgagaacaaagcaaaatctgaagct
cctcaacctcacaaaaagatctctggggaagaaaaactctcaacagtaagtgagcagtca
aaaaagaaacctggttctgaaaaagtaaccgaaaataaaaaatctcccgcttgtgaaaat
atggaaactacagaagcaaatacatcaacactgcctgaagagtcaacaaaagatctctca
aaagaagaatcaatgcaagatctctcaaaaaaggaagcaaagaaagatcacttacaagaa
gcaaagaaaggtctgtcaaaacaacaaacagtaaaagatctcccaaacaaagaatcatca
aaagatctcgcaagagaagagtcaatggaaaatctcccaaaagatctgccgaaagaacag
tcaatgaaagatctctcaaaagaagggtcatcaaaaaaagagacaataaagaatctccca
aatgaagaatcaaaaaaagaagaagagtcacagaaagttctcacagaagaaagtcaaaaa
tctcccaaagactcggacaactccaataaagccctggaaaaacaagatccaactgcttcc
atggcgattgaaacagaaccattccagtcatctaaaatggaggagtcctcttcccatgaa
gtaatcaaaccacattctggcacaaaaaagccacagaacactgaagaaacgaaaactcat
cacagttctgcagacaccaccacagaaaaagagtcagctgcccctgtctcaaaaactgaa
aaacagtatatgtctgaagcagacaaactctcaaccaagggagaaagccagtccattgcc
tctaaaccttctgaagatacaggtggccctcaagacaaagcacaagagcagtctgcctcc
aagtcggcatcaagggatcctgaaaaatcatctgtttctgattcaacgaggaagccaagt
acaccaaaaaccacagagaaagtagatggtgaggaaaaatgtgacacagctgaaacagat
aaaaatgagaattcagaagcgacaaaagaaaaagatgcaaagggtgaacatgcaaatagc
tctgaagaatctgcagcgaaaaaattggtcaaagaagttaaaacttcagaagaacccaat
gaacccaacagttctgagaaacctccttctgaaagagaacatgaaaaggaaccagattca
gagaaggggaacaaagagaagcaaatggaagttgattcagagatcactaaatctgatgaa
gtacaattggctgttaaggaggtatgtgagacttcaagagcaaggaagaagaaaactgat
gttcctgtggatcaaagcaccacctcaagcaaacaatctgagcaagaagcaacttctgaa
caaagtgaggcttccggtgatgttcacgaaaagagcaacacagctctaagaagcagtaaa
agagcaggacggcctccaaagaaatctcaggagagtcaggatgaggataaaacaggagaa
gaacaagaagaaaagaccgacttgcaacaggaagcaattcgtatgaagattaaaatccca
gctcacagacggaaggctgaactccagaaagaagaggtcaagggagattcagagtctgag
acgactgagggcagatgcttgcggagatctccgagaatctgcaggcccaccgctaaagct
gtggagatccaggataggagggcggaacggaagcaggcgcctccagtgtcggagaaagaa
aaggatgagaaagaaaaggatgacaacgaagaaaaagaggatgaggaatcggttcagagg
aaaccgaagaaagctgagccagatggccaaacgaaaccaaaggtggggaggcgtcgaaaa
cgacaaccatggtctcgaatgagacgtaaaaagaaatgttctgaagatgatgaggaggag
gaggaggagagcgagagtgaggaagaggagacggaggaggatgacagcgatgaagactac
aaggtggagaagaccagaaagagaaggagaaaccgaaaacgagagcggaacagctcggac
tcctctacctcttcatcagaagatgatcaacccaatgatgacccctgcaaacactgtggc
cttcccaatcatcccgagctgatactcctgtgtgattcctgtgacagcggctaccacact
gcctgtctgcggcctccgctcatgatcattccagatggggaatggttctgtcctccctgc
cagcataaacaactttgtgacaggcttgaagagcagttgctgaatttggatgccgccctc
aaaaagaaagaacgtgcagaacgaaggaaagagcgactggtatatgttgggatcagcgtg
gagaacatcatcacaccctctgtggaagtggaagaagaaaaggaagaggaggtggtgaat
gagaaggagacgaagaagagcaaaagttgggggcgtagatcaaccagggcaaagaaatac
ataagctacagatttgatgagtttgatgaagcgattgaagaggcaatcgaggaagacatc
aaagaggcagaggggggaggagcaggccgggggaaggacatggcgaacatcacaggccac
agagggaaggacatatccaccattctacaagaggacgggaaggagaacggccgaccgcgg
agaccaagtgcagctcagaagaaaaagaggcggcgtctcaacgatctggacagcgacagc
actgtggatgaggaagagagcgaagacgagtttcgtcttagcgacagcagttcagaagag
gaggagtttgtggcttctgataacgaggcagagagtgaagcagaagccccgtccttggat
gacagtgacttcgggagcgatgcagaaggcccgcagataaaaacttcaaacagacgggca
gcaagccggtgtcgaaacagaagacagccgccacgcaggagacgcagacccagaggatac
tctgacgaagaggagctggaaactgatgaagaggaggaagaggacgagatggtgacggaa
ggctctagtgaattcagtgacagcgatctggacattcgctatcggcggtcctatcggagc
cgtaagcaacaggtgaattactgtgaaagttcagatactgatggctcacaggccagcacc
aacagagacaaaaagaaacgcagacgtctttccagctctgacagcgaagttagtttccag
tcagctgaatctgatgaagaagacaggaagcccaagaagataagggtggactcgtctgag
gaagaatccaggaaacggcgcagacgcctgtccctaaaacggcggagggagtcagaggat
gacgacgaagatggcgacgattcagacgaatctgaggaagaggaacggcccgtccggaag
cgtgtgaaccgcatcgactctgacgacagcgaaggtgaagaagaagaggaggaggtgaag
aagagcccgctggagaaagagacagaggagaccgttggcaaagggcccagtccactagac
tacaacttggtggagcttcctcccactaatggacaaagcccaatgaagggtttagagggc
ctcatgccacgacctggggtgggagtgacgcctaaaaatggcaatgccccatcggctgtg
accatagcgccgaatggcctggagattcccgcacaggacgaagatgaagacgaccttttg
ggtgtcacagacctcgtagactatgtctgcaacagtgaacagttataa
DBGET
integrated database retrieval system
