Ctenopharyngodon idella (grass carp): 127521056
Help
Entry
127521056 CDS
T08802
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127521056
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127521056
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127521056
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127521056
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Protocadherins
127521056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
127521056
NCBI-ProteinID:
XP_051765873
LinkDB
All DBs
Position
10:complement(32935011..33032077)
Genome browser
AA seq
1190 aa
AA seq
DB search
MDLPVVLFLLWGLLLDLLSGAVGGILYRVHEEQPPSTLIGSLAADQGLPDTGHLYKLEVG
APYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIE
VQDINDNTPQFPSPVLTLSVPENTHMGSLFSIPLATDKDTERNGVADYTLTAGPEAVALF
GLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNA
PTFEKSSYEAEVAENSPIGHSVLQVKANDSDMGPNGEIEYTLHQAIDPVPKLLRIDRSSG
IIYVKGPLDREEINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTH
SDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYF
LQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAE
ENQPGEKVVDVVASDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKER
YEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQ
DMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSS
YVGVTINVLDENDNAPVVTKPSNSSFMRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIA
GGNPHDLFYISPSNGEITLTKELTRKHSGLHRLVVKVSDRGKPSRHAIALVHIYVNETIA
NVSHVEALVGHSLYTPLDMDIAGDPDYGLAAQRSNIVYGSLAGVAGVVTVIVVVVFIRHR
LQREAKSGYQAGKKETKDLYAPKQGPKSGKGRKGKKGKPPKSPKPLGEDEEVSLQKSLKF
NLDGVNDSPRIHLPLTYPPGSPDLGRHYRSNSPLPSIQLQAQSPSASQKHQAVQELPAAN
TFVGTGGDDNSTGSDQYSDYSYKTNQPKYSTKTLPHRRVTFSTANPMQDQQDSSQQSYYD
SGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPETDIRSLPDVAMTGNC
SQECSELGHSDACWMPGQPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSVRLGGDENRP
RLPPSRSAYSSSDHNPSDHAPLEEVPLSVTSEFPPTSPPSNHASKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggatctccctgtggtgttgtttctgctgtggggactgttactggacttgctgagtggt
gcggtgggaggcattctataccgcgtacatgaggaacagcctccaagcacactgattggc
agcctggcggctgaccaggggctaccagacactggacacctgtacaaactggaggtgggc
gctccctatctgcgggtggatggcaaaactggagatatctttaccactgagatccccata
gacagagagacactgaaggattgtcgtaataaaggcaagccctgcttcctggagtttgag
gtgtccgtcacagaccttattcaaaatcagagtccacggctgatagagggaaggatcgag
gtgcaggatatcaatgataatacaccacaattcccctcacctgtccttaccctctcagtt
ccagagaacacccacatggggtcactcttttcaattccactggccactgacaaagataca
gagaggaatggagtagctgactacaccttaacggcaggaccagaggctgtagcactcttt
ggtctgcaagttgcagaggaccgaggtgaaaaattgcctcaactcattgtgttgggaagt
cttgatcgagagctgaaagactcctatgacctcaccatcaaagctgtggatggaggcaat
ccacctcgctacagcagtgccttgctgagggttgtcattgctgatgccaacgacaatgca
cccacgtttgaaaaatcctcctacgaagcagaggttgcagagaacagcccaatcggacac
tctgtgttacaggtgaaggctaatgattcagacatgggtcctaatggcgagattgaatac
acattacatcaggccattgatcctgtgccaaaactgctccggatagaccgctcatcaggc
atcatatatgtcaaaggcccattggatcgtgaggagatcaacaatttgaaattttatgtt
gttgcgcgagataaaggcccctcaccgaaaagttctaaaacatatgtttctattgatgtg
acggaccagaatgacaatgcaccagcagtggagattcgaggcattggtcttgtgacccat
agtgatggggtagcaaacatttcagaggacatgccagttggcactgcagtggcattggta
caggtttcagacaaggacgagggagagaatgctgtggtgacctgtgtggttgcaggtgat
gttcctttccagcttcggccagccagtgattcatcagttgacaacaagagaaagtacttt
ctgcagaccacaacacctctggactatgaaagagttagggactaccgggtggagatagtg
gcagtggattcaggcaatccagctctgtccagcactaactcgctgaaagtccaagtgact
gacacaaatgacaattcccccattttctcaccaaccctgtttgaagtagagtttgctgag
gagaaccaaccaggagaaaaggtggtagatgtagtcgcctcagatgcagacagtggcact
aatgcagagcttgtctacagcattattgcggactcttcaacaagggggctttttgagatt
gaccccagctcaggcgaagtacgtgctcgaagccctcttgatcgtgagcacaaggagcgc
tatgagttccgtgttactgcagctgataaaggggttcccagccacaggggtactgccaca
gttgtaatcaaagtacttgatcggaatgacaacgatcctaagttcatgctgagtggctac
agcttctcagtcttggagaacatgccacctcttagccctgttggcatggtaacagtacag
gacatggacgagggcgagaatgctcaagtgcaactttctgtggaaccggatgtgggcaaa
tttgtgatccagaatggtactggcactattctgtccagtatctcatttgacagagagaag
gagagcagttacacattccggttgaaagctgtagatggaggggacccacccaggtcatcc
tacgttggagtgaccatcaatgtcctcgatgagaatgataatgcacctgttgtcaccaaa
ccatccaactcatcctttatgcgtctgtctcccatggctgctccagacagtgttgtggaa
gtggttgaagcagaggacattgattctggttccaatgctgaacttgtatacagcattgct
gggggaaatccacatgaccttttttacatctctccatctaatggcgagatcacactaacc
aaggaactaactcgaaaacatagtggtctgcatcgactggtggtaaaagtgagtgacagg
ggcaaaccatcccgccatgctattgccttggtacacatttacgtaaatgaaaccattgct
aatgtaagtcatgtggaagcacttgtggggcatagcttgtacaccccgctggatatggac
attgcaggagacccagattatggtctggctgcccagaggagcaacattgtatatggcagt
ttagctggagtggcgggagtggtcactgtgattgttgtggtggtcttcatcaggcatcgc
cttcaaagagaagctaagagtggttatcaggctggcaagaaggagaccaaagatttgtat
gcccccaagcaagggccaaaaagtggcaaggggagaaagggtaaaaaaggtaagccacca
aagtcacctaaacctcttggagaggatgaggaagtcagccttcaaaagagtctgaaattt
aaccttgatggggtcaacgacagccccaggatccatttgcctctgacatatccgcctgga
agccctgacctaggcaggcactaccgttccaattccccattgccctccatccagctccag
gcccagtccccatctgcctcccaaaagcatcaggctgtccaggagctccctgctgccaac
acctttgtgggaacaggcggtgatgacaactccaccggctcagaccagtactcggattac
agttacaagaccaatcaaccaaaatacagcacaaaaacgctcccgcatcgcagagtgacg
ttctccacagccaatcccatgcaagatcagcaggactcctctcagcaaagttactatgac
agtggcttggaggagtccgagacccccagcagcaagagctcttcaggaccccgtatcggc
cccctcgccctgcccgaggaccactacgaacggaccacccctgatggcagcatcggagag
atggaacacccagaaactgatattcgctcattgcctgatgttgccatgacgggaaactgc
agccaggagtgcagcgagcttggtcattcagatgcctgttggatgcccggtcagccttct
cccgtccgcaagacccgcaacccccctaaactatccacgtttgtgccttatcaggagagg
gggagcctgggacgcctggccaatgggagcgtgaggctgggaggagatgagaacaggcca
cgcctcccaccttcccgtagtgcctactccagtagtgaccacaaccccagtgaccacgcc
ccactagaggaggtgcctctaagcgtgacatcagagttcccgcctaccagccccccctcc
aatcacgcctcaaaaagagagatatacctgtga
DBGET
integrated database retrieval system
