Ctenopharyngodon idella (grass carp): 127521140
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Entry
127521140 CDS
T08802
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127521140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127521140
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
127521140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
127521140
NCBI-ProteinID:
XP_051766100
LinkDB
All DBs
Position
1:complement(6444727..6509047)
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AA seq
513 aa
AA seq
DB search
MHRIPGQNRLTGPAQGDHGFPGVGQNREPFKIREQIKLEALDSDEDEEQPPLAMASNSIF
ESFPSYQSCFTREPAPGRRFTPPSTTLSSGKMNEGLPLGAQESSGAALVGKLRMADRSMV
EVLSDHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAGNDEN
YSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKITVDG
PREPRRHRQKPDEAVKPGALAFSEQLRRSAMRCSPHHGPAPNPRPALNTPPFSSPAHSQI
PDSRQMQTSPSWSYEQSYPYLGPISTPTVHPTTPISPSRNAIHCPDLTAFTDPRVGLERS
FPSLPSLPDGRFSDPRVPYPTGAFTYTPTPVTNAIGIGMSAMTSPAGRYHTYLPPAYPAG
SSQAQAGPFQAGSSPYHLYYSSAAGSYQFSMMPGGGGGERSPPRILPPCTNASTGSALLH
PSLPNQSDVVVEAEGSHSSSPTNMSVEAVWRPY
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaatcccaggacagaaccgcctcaccggaccggcacagggtgaccatgggttc
cctggtgtggggcaaaaccgggagcctttcaaaattcgggagcagatcaagttggaagcc
ttggattcagacgaagacgaggagcagccgccgctcgcgatggcctccaacagcatcttc
gaaagcttcccgtcctaccagtcgtgcttcacccgggaacctgcgcctgggcgacgcttc
acgcctccctcgaccacgctgagctcggggaagatgaacgaggggttgccgctgggggct
caggaaagcagcggcgccgccctggtgggcaaactgcgcatggctgaccggagcatggtg
gaggtgctttccgaccacccaggagagctggtgcgcaccgacagccccaacttcctctgc
tccgtcctgccaacacactggcgctgcaataaaaccctgcccatcgctttcaaggtggtt
gccctcggcgatatccctgacggcacgctggtcaccgtgatggccggcaacgatgagaac
tattctgccgaactccgcaacgccacggctgccatcaagaaccaagtggcacgtttcaac
gacctgcgtttcgtcggccgcagcggacgaggaaagagcttcactctcaccatcaccgtc
ttcacgaaccctcctcaggtggccacttatcagagagccatcaagatcactgtggacgga
ccccgagaaccacgccgccaccgacagaagccggatgaagcggtaaagccaggcgcgtta
gctttctctgagcagttgaggcgaagtgccatgcggtgcagtccacaccacggccccgcc
cccaacccccgccccgccctcaacacgccccccttcagcagccccgcccacagccagatt
cccgattcgaggcagatgcagacgtctccttcctggtcgtatgaacagtcgtacccttac
ctgggccccatctccaccccgacggtccacccgacgacacccatctcacccagccgcaac
gctatacactgtccagatctgacggcgttcactgaccctcgcgtcggcctggagcgttcc
ttcccctcgctcccctccctaccagacggccgtttctcggatccgcgcgtgccgtacccc
accggggcgtttacgtacacgcccacccctgtcaccaacgccatcggcatcggcatgtcg
gctatgacaagccccgcgggccgctaccacacatacttaccgccggcgtaccccgcgggg
tcctcgcaggctcaggccggacccttccaggccggctcgtccccgtatcacctctactac
agcagtgccgccggatcctaccagttctccatgatgccgggcggaggaggaggcgagcgc
tcgccgccgcgcatcttaccgccctgcaccaacgcctccacaggctccgccctcctgcac
ccctctctgcccaatcagagcgacgtcgtggtggaggccgaaggaagccacagcagttcg
ccgaccaacatgtcggtcgaagccgtctggaggccgtattga
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