Ctenopharyngodon idella (grass carp): 127521262
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Entry
127521262 CDS
T08802
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03272
Virion - Hepatitis viruses
cide04514
Cell adhesion molecules
cide04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127521262
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127521262
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127521262
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127521262
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127521262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
NnrU
DUF3496
PRKG1_interact
Swi5
Syntaxin
CCDC22_CC
APG6_N
UPF0184
Rieske
FTA4
DivIC
ACBP4_C
DUF7307
FapA
DUF2070
Motif
Other DBs
NCBI-GeneID:
127521262
NCBI-ProteinID:
XP_051766396
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All DBs
Position
10:complement(47403576..47415719)
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AA seq
499 aa
AA seq
DB search
MSSKPNGSPPPYDYHTEDGYNVAPQPAYSYYPDDEFQHFYRWTSPPGIIKIMCVLSVILC
VGIFVCVASTLAWDTNAGAAGFGGYGGSYGVGSYGGSYGGSYGGSYGSGGFGGSGGYGYG
ILGSQNDPRQGKGFMIAMAIITFIVLLVIFIMIISHQKVAQGRKFYLAVIITSAIMAFLM
FVATIVYLVTIYPMAQTSGSVQFNQVYAMCAAYQQPQMSGAFVNQYLYHYCVVDPQEAIA
LVLGFIVTAALIIIMVFAIKTRQRINYHGKDNILWRRVKEIDTNSPQDVEDWVNDVNGVP
DPLLADYPMKFGGSTNDLDDNSTNYDKPPHSESPVEIRHELPVRSSVPLSSGSEFSSSAG
RPKKRRAGRPRTADGRDRDTDYASSGDELDDEDFFSEFPPIANNEEREDYKHLFDKDHQE
YKELQAELDQINKRLADVDRELDDLQEGSPQFLDAMDEYNVLKDMKRGGDYQVKKKRCKH
LKAKLNHIKKMVSDYDRRC
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaagccgaacgggagtcctccgccctatgattatcatactgaggatggatat
aatgttgcccctcagcctgcgtactcgtactaccccgacgatgagttccagcatttctac
cgctggacgtctccgccgggcatcataaagatcatgtgtgtgctgtcggtcatcctctgc
gtgggcatcttcgtatgcgtggcctccactctggcctgggatacgaatgctggagcagct
ggattcggaggctacggaggttcttatggagtcggctcctatggtggctcctatggtggc
tcctatggtggctcctatggcagcggcggctttgggggaagtggaggctacggttatggg
atcctaggatctcagaacgaccccaggcaaggaaagggtttcatgatcgcgatggcgatc
atcaccttcatcgttctgctcgtcatctttatcatgatcatctcgcaccagaaagtggcc
cagggcaggaagttttatctggccgtcatcatcaccagtgccatcatggcctttctcatg
tttgttgccaccatagtctacctggtgacgatttacccaatggcccagacgtccggatca
gttcagttcaatcaagtgtacgccatgtgtgccgcttaccagcagccgcagatgtcgggt
gcattcgtcaatcaatatctgtatcactactgcgtcgtggatcctcaggaggcaatcgct
ctagttttgggctttattgtcaccgcggccctcattatcatcatggtttttgccattaaa
acccgtcaaaggatcaattatcatgggaaggacaacatcctgtggcgccgtgtgaaagaa
atcgacacaaactcaccacaggatgtggaggattgggtgaatgatgtgaatggcgtccct
gatccactgctggctgactatcccatgaagttcggagggtctacaaatgatctagatgac
aacagcacaaattatgacaaacctccccacagtgagagtcctgtggagattcggcatgag
ctgcctgtgcgtagttcagtcccactgagcagcggttcagagttcagcagctctgcagga
cggcccaagaaacgccgcgctggacgcccgcgtaccgccgacggccgggatcgtgacaca
gactacgcctcttctggagatgagctggatgatgaggacttcttcagtgaattccctccc
attgctaataatgaagagagagaagattacaaacacctgtttgataaagaccatcaggag
tacaaggagctgcaggcagaactggaccagatcaacaagcgtctggctgacgtggaccga
gagctcgatgacctgcaggagggcagccctcagttcctggacgccatggacgagtacaac
gtgctcaaagacatgaagaggggcggagattaccaggtgaagaagaagaggtgcaagcac
ctgaaggccaaactaaaccacatcaagaagatggtcagcgattatgatcgcagatgctga
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integrated database retrieval system