Ctenopharyngodon idella (grass carp): 127521425
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Entry
127521425 CDS
T08802
Symbol
si:ch211-79m20.1
Name
(RefSeq) adenylate cyclase, terminal-differentiation specific isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
cide04510
Focal adhesion
cide04540
Gap junction
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127521425 (si:ch211-79m20.1)
04020 Calcium signaling pathway
127521425 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127521425 (si:ch211-79m20.1)
04540 Gap junction
127521425 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127521425 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cide04052
]
127521425 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127521425 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
cide04052
]
Cytokines
Growth factors (RTK binding)
127521425 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Growth factors/receptors
127521425 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
127521425
NCBI-ProteinID:
XP_051766637
LinkDB
All DBs
Position
10:complement(16891711..16910319)
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AA seq
485 aa
AA seq
DB search
MMSSRLLLLVLAALAACLRSGRAQGDPLPPSLVDLVMNSPISSVDDLKRLLDVESVEEDD
EIPENEMHSNGTHKRLPRSLSVQVAQQAMCKVRTEVMEVTRSMLDRRNANFLLWPPCVEV
QRCSGCCNTRIVQCVPVTIETRHLQMTKIQFINRQPVYEKVIIPVEDHVTCSCQSRVSAH
SPRLQTTPLPPPRPKVTLPKTQSKEELHRNDELKHNQRLHLEDKESQELQWQSKNTVTHT
QGYQQSPYQHTISHTPVYVSRGDVPTKQTTLGDPHMMSDATQTEEVDRMKSENSGDGMAK
KTQLHYDKHLQEDQQPRPQQPQDKTTPQQPKYNLSHNPVQSGHSIPQSSQLDTFSHTYSH
VEVIGQSSGLSEVLNHHSDQSEVRKHHHHHQSEASNQNMQEGEQQQETQHHLRHQHHQHH
QLHQHTTQAVSQQQTSTQKTVTKTPPTTPSAPQTPPPLQPPRKRRRKHRKRMSKASMRAM
IMVMS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcgcggcttctgctgctggtgctcgcggcgctcgcagcgtgcctgcggtct
ggtcgcgcgcagggggaccctctccctccatctctggtggacttagtgatgaacagcccg
atctcatccgtagatgatctaaagagacttctggacgtagaatccgtagaggaagatgat
gagatacccgagaatgagatgcactctaacggaacacacaaacgtcttcccagaagcctt
agcgttcaggtggcccagcaggccatgtgcaaggtgagaacagaagttatggaagtgacc
cgttcgatgctggacagacggaatgccaacttcctgttatggcctccgtgtgtggaagtg
cagcgctgttcaggctgctgcaacacacgaattgtacaatgtgtgccagtcaccatagaa
acacgacatttacagatgacgaaaatccagtttatcaaccgacaaccagtctatgagaag
gttatcatacccgtggaggaccatgtaacttgtagctgtcaatcacgtgtttctgcacac
agcccacggctccaaaccacacctcttcctccgcccagacctaaagtaacgctaccaaag
acccaatcgaaagaggagctacatcgcaatgacgaacttaaacataatcaaaggctccat
ttggaggataaagagagtcaggaactacaatggcagtcaaaaaacacagtcacacacaca
cagggctaccaacaaagcccgtaccaacatacaatatcgcacacgccagtttatgtgagc
agaggagatgttcccaccaaacaaaccacattaggagatccacacatgatgagtgacgca
acacaaacagaggaggttgatcgcatgaaatccgaaaacagtggtgacggcatggcgaaa
aagacgcaactacattacgacaaacatctgcaagaggatcaacagccaagaccacagcaa
ccacaggataaaactacaccacagcaaccaaaatacaatctttcccacaatcctgtccaa
tcaggacacagcataccacaaagtagccaattagacacttttagtcacacttacagccac
gttgaggtgatcggccaatccagcggcttatcagaagtgctaaatcatcactctgaccaa
tcagaagttagaaaacatcaccaccaccaccaatcagaagcaagtaaccaaaatatgcag
gaaggggaacagcagcaagaaacacaacatcatcttcgtcaccaacaccaccaacaccat
cagcttcaccaacatacaacgcaagcagttagccaacaacagacaagcacacaaaaaaca
gtgactaaaactcctcccaccaccccctcagccccacagactccacctcctctccagccc
ccacggaagcgccgacggaaacatcggaagaggatgagcaaggcctctatgagagcaatg
ataatggtaatgtcctga
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