Ctenopharyngodon idella (grass carp): 127521471
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Entry
127521471 CDS
T08802
Name
(RefSeq) fibrillin-2b isoform X1
KO
K23342
fibrillin 2/3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127521471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127521471
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127521471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
FXa_inhibition
hEGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_Teneurin
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
127521471
NCBI-ProteinID:
XP_051766699
LinkDB
All DBs
Position
10:complement(2486242..2550615)
Genome browser
AA seq
2872 aa
AA seq
DB search
MGVWNLAKVVLGWAAVWWAAVYSVQAQGDGDIQANRFTGKPEGEVQQRVRRRGQESLRGP
NVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCSSGHLAPSCGAAAV
QSCSVRCMNGGVCNEDACSCQKGYTGTHCGQPVCESGCQNGGRCIGPNRCACVYGFTGPQ
CERDYRTGPCFTQVNNQMCQGQLSGIVCTKTLCCATIGRAWGHPCEMCPAQPHPCRRGFI
PNIRTGACQDVDECQAVPGLCAGGNCINTVGSYECKCPAGHRQSETNQKCEDIDECTTIS
GVCDGGECTNTAGSYVCTCPRGYVTSADGSRCVDHRLGACFSSLANGRCASELSGQYTKG
QCCCDTGRCWALGHIPEMCPVRGSDEYRRLCIQRLPFGTGNGGIIHDGNGGLNIGGYGKG
PSQNGNGGGYIYGGEHTIGNGNNGNGGQKIPLSQLNETTIDVCKHFTNLCLNGRCIPTPT
SYRCECNMGYRQDVRGECIDVEECTSNPCVNGDCVNTQGSYHCRCHEGYQGTPTKQACID
IDECIVNGVMCRNGRCVNTDGSFQCICNAGFEISPDGKNCVDHDECATTNMCLNGMCINE
DGSFKCICKPGFALAPNGRYCTDIDECQTSGICMNGRCVNTEGSFRCECPTGLAIDVDGR
VCVDTHMRTTCYGAIKMGTCSRPFPGAVTKSECCCANAEHGFGEPCQPCPAFNSAEFQAV
CSSGPGITADGRDINECALDPEICQNGICENLRGSYRCICNIGYESDASGKNCVDINECS
VNRLLCDNGMCRNTPGSYTCSCPKGFSFKADSETCEDINECDSNPCINGVCRNIAGSFNC
ECSHGSKLDSTNTVCVDSMKGTCWLNIQDGRCEVNINGATLKSECCSTLGAAWGSPCERC
EIDPACSKGFARKKGLVCEDINECEVFPTVCTNGRCVNTQGSFRCECPEGLTLDGAGRTC
VDIRSEQCYMKWDEDECVEPLPGRYRVDMCCCTVGAAWGVDCEACPKPDTPEFKTICPRG
PGIANRGDILTGRPFYKDVNECKVFKGLCTHGTCRNTIGSFKCRCDSGFALTMEERNCTD
IDECTISPDLCGHGVCVNTPGSFECECFEGYESGFMMMKNCMDVDECEQNPLLCRGGTCL
NTEGSYECDCPPGHQLNTEASACEDVNECQLSDNLCKNGQCVNMVGTYQCSCNTGYQVTP
DRQGCVDIDECTIMNGGCDTHCTNSEGSYECSCSEGYALMPDLRTCADIDECEDSPDICD
GGQCTNIPGEYRCLCYDGFMASMDMRTCIDVNECDLNPNICLHGDCENTKGSFICHCQLG
YFVKKGSTGCTDIDECEIGAHNCDMHAACVNVPGSFKCRCRDGWEGDGIKCIDVDECVTE
EHNCNPNAECMNTPGSYRCSCREGFNGDGFTCSDMDECADNVNLCENGQCLNAPGGYRCE
CEMGFTPTEDSKACQDIDECNFQNICVFGSCQNLPGMFRCVCDYGYELDRSGGNCTDINE
CFDPVNCINGVCVNLPGSYLCNCPPDFELNPSGVGCVDTRVGNCFLDTLDRGDGGISCSA
EIGVGVTRASCCCSLGGAWGNPCELCPPVNSTEYKTLCPGGEGFRPNPITVILEDIDECQ
ELPGLCQGGNCVNTFGSFQCECPAGYYLNEETRICEDIDECTAHIGICGPGTCYNTLGNY
TCVCPPEYMQVNGGNNCMDMRKSVCYRNFNDTCENELSFNMTKKMCCCAYNVGKAWNRPC
EACPTPATSEYQLLCGNQVPGFIIDIHTGKPIDIDECREIPGICANGVCINQIGSFRCEC
PMGFSYNNILLICEDIDECNSGDNLCQRNANCINIPGSYRCECLAGFKLSPSGACVDRNE
CQEIPNICSHGKCIDTEGSFRCLCHNGFKTTPDQTMCMDIDECDRQPCGNGTCKNTVGSY
NCLCFPGFELTHNNDCMDIDECSVHASQVCRNGQCINSMGSFKCLCLDGYNLTPDGKNCV
DINECVTLPGACQPGTCQNLDGSFRCICPPGYEVQNDKCVDINECNVEPNICQFGTCKNT
PGSFQCICQPGFVLSDNGRRCFDTRESFCFTRFESGKCTVPKPLNTTKAKCCCNLLPGEG
WGDPCELCPRETEAAFHTLCPYGHEAVPNPIGREDMNECVENPGICGNGLCINTDGSFRC
ECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCSNVPGGFECSCQEGFEPGPMMTCEDINE
CAVNPLLCAFRCVNTFGSYECMCPTGYVLRDDNRMCRDQDECAEGLDDCASRGMACKNQI
GTFMCICPPGMTRRPDGEGCMDLNECRSKPGICKNGRCVNTVGSYRCECNEGFEPSSTGT
ECIDNRKGFCFTEVLQTMCQQSSTNRNTVTKSECCCNGGRGWGSLCELCPLPGTVQYKKM
CPLGPGYTTDGRDINECEVMPNLCKNGQCINSVGSFRCHCNVGYTDDFTGTSCVDMDECS
QSPKPCNFLCKNTEGSYLCSCPRGYILQPDGKTCKDLDECSTKQHNCQFLCVNTIGGFTC
KCPTGFTQHQTACIDNNECSNQPNVCGSRASCLNTPGSFNCECQKGFSLDTTGHNCDDVD
ECGGNHRCQHGCQNMLGGYRCGCPQGYVQHYQWNQCVDENECAGNQVCGSASCYNTLGSY
KCVCPSGFDFEAAAGGCQDVNECSMGSNPCSYGCSNTDGGYLCGCPGGFYRAGQGHCITG
AGFQGQFGSEGVDDEESLSPEACYECKINGDLGKKGRNRRNAGDNELKETVSMASMDVQT
SIPMNLSLAQLQNKEPLLELLPALEPLEHHVRYVITHGNQGEHFRILERRDGKSVLRLGR
KPPAPGLYRLEIASMRLFGPRKLQDLEDQHDSDYLLGEIGDALRIKLHIHLH
NT seq
8619 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgtggaatctggccaaggtggtgctcggatgggctgcggtctggtgggcagca
gtctattcggtgcaggcgcaaggagatggagacatccaggccaaccgattcactggaaaa
cctgagggggaggtgcaacagagggtccgtcggagaggccaggagtccctcagggggccc
aatgtatgtggttcccgctttcactcctattgttgtccaggatggaaaacgcttcccgga
gggaaccagtgtatagttccaatctgtagaaactcgtgtggggatggtttttgttcgagg
cccaacatgtgtacctgctccagtggtcatcttgcccctagctgtggggcggccgcagtc
cagtcctgcagcgtcagatgcatgaatggaggggtctgtaatgaagacgcctgctcgtgt
cagaagggctacacagggactcactgtggacagcctgtgtgtgagagcggatgtcaaaac
ggcggccgttgtattggaccaaacagatgtgcctgcgtctatggttttactggaccacag
tgcgagagagactaccggactgggccttgcttcacacaggtcaacaaccagatgtgccaa
ggtcagctaagtggcatcgtgtgcaccaagacgctgtgctgcgccaccatcgggcgagca
tggggtcacccatgtgaaatgtgccctgcccaaccccatccttgccgaaggggtttcata
cccaacattcgtactggtgcttgccaagacgtggacgagtgtcaagccgtcccgggacta
tgtgctggaggaaactgcattaacaccgtgggctcgtacgagtgcaaatgtcccgcgggt
caccgacagagtgagaccaatcagaagtgcgaagatatcgacgaatgcacaaccatatcc
ggagtgtgcgacggtggagaatgtaccaacaccgccggcagctatgtgtgcacctgtccg
cggggatacgtcaccagcgcagacgggtccagatgtgtcgatcatcggctcggtgcgtgt
ttctcatctttggcgaacggccgctgcgcgagtgaattgtccggtcagtacaccaaggga
cagtgctgctgcgacacgggccgctgctgggccctcggacacatcccagagatgtgcccc
gtcagaggatctgacgaatacaggcgactgtgcatccagaggcttcctttcggcactggc
aacggcggcatcatccacgatggcaacggcggcctgaatatcggcggttacggcaaaggg
ccctcacagaacgggaacggcggcggctacatttacggcggcgagcacaccatcggaaac
ggcaacaacggcaacggcggccagaagattccactcagccagctgaacgagaccacgatt
gacgtgtgcaagcatttcaccaacctgtgcctgaacggccgctgtattcccacgccgacc
agctaccgctgcgaatgcaacatgggttacaggcaggacgtgcgcggggagtgcattgac
gtggaagagtgcaccagtaacccgtgtgtgaacggagactgcgtcaacacgcaaggatcg
tatcactgcagatgtcacgagggataccagggaacgcccaccaaacaggcctgcattgac
attgacgagtgcatcgtgaacggggttatgtgccgaaacggacgctgtgtgaacaccgat
ggaagtttccagtgcatctgtaacgctggctttgaaatcagccctgatgggaagaactgc
gtcgaccatgatgaatgtgccaccaccaacatgtgcctcaacggcatgtgcataaacgaa
gatggaagcttcaagtgcatctgcaaacctggatttgcgttggcacccaatggacgctac
tgcaccgacattgatgaatgccagacctcgggcatctgtatgaacggccgctgcgtgaac
accgagggctcattccgctgcgagtgcccaacaggcctggccattgacgtggacgggcgt
gtctgcgtggacacccacatgcgcaccacctgctacggcgcaataaagatgggcacgtgt
tcgcgcccattccccggggcggtgacgaagtctgaatgctgttgcgccaacgcagaacac
ggcttcggagaaccctgccaaccctgcccggcgttcaactcagccgagtttcaggcggtg
tgcagcagcggacctggaatcactgcagatggacgagacatcaacgagtgcgccttggat
ccagaaatctgtcaaaacggtatctgcgagaacttgcgcgggagctaccgttgcatctgt
aacatcggctacgagtctgacgctagcggaaagaattgcgtggacattaacgagtgttcg
gtgaatcggttgttgtgtgacaacggcatgtgtagaaacacgcccggaagttacacttgc
tcttgccccaaaggattctccttcaaagccgattctgagacatgtgaagacatcaacgag
tgcgactccaacccctgcatcaacggcgtgtgccgcaacatagccggttccttcaactgc
gaatgttcccacggcagcaagctggactccaccaacaccgtctgcgtagacagcatgaaa
ggaacctgctggctgaacatccaggacggccgctgtgaggtgaatataaacggggccacg
ctgaagtccgagtgctgctctacgctgggggcggcctggggaagcccatgtgaacgctgt
gaaatcgatcctgcctgctcgaaaggtttcgctcgcaagaaaggacttgtatgtgaagat
attaacgagtgcgaggttttccccaccgtgtgcacaaacggccgatgcgtgaacacacag
ggctcgttccgatgcgagtgtcccgagggactgacgctggacggagccggacgaacatgt
gttgatatccgaagtgagcagtgttacatgaagtgggacgaggacgagtgtgtggagccg
ttaccgggccggtaccgtgtggacatgtgctgttgtacggtgggagcggcgtggggcgtc
gactgtgaggcgtgtcccaaacccgacacgcccgaattcaaaaccatctgcccacgtgga
cccggaatcgccaaccgaggggacatcctgacaggaagacccttctacaaagatgtgaac
gaatgtaaggtgttcaaaggcctgtgcactcacgggacgtgccgaaacaccatcgggagc
ttcaagtgtcgctgtgacagcggtttcgccctcaccatggaggagaggaactgcacagat
attgacgagtgcaccatctcacctgacctgtgcggacacggcgtctgcgtcaacacgccg
ggcagcttcgagtgcgagtgtttcgagggctacgagagcggctttatgatgatgaagaac
tgcatggacgtggacgagtgtgagcagaacccgctgctgtgtcgggggggcacgtgtctg
aacacagagggcagttatgagtgcgactgtcctccgggacaccagctgaacactgaagct
tcagcctgtgaagatgtgaacgagtgtcagctgagtgataacctgtgtaagaacggtcag
tgtgtgaacatggtgggaacctaccagtgctcctgcaacacgggataccaggtgacgccc
gacagacagggctgtgtggatatcgacgagtgcaccatcatgaacggcggctgcgacact
cactgcacgaactcggagggcagttacgaatgcagctgcagcgaaggttacgcgctcatg
cccgacctcaggacctgcgccgacatcgacgagtgcgaagactcgcccgacatctgcgac
ggcggccagtgtacgaacatccccggagaatatcgctgcctctgctacgacggattcatg
gcctccatggacatgaggacctgcattgatgtcaatgagtgcgacctgaatcccaacatc
tgtctccacggtgactgtgagaacactaaagggtccttcatctgccactgtcagctggga
tacttcgtgaagaagggctcgaccggatgcacagatatcgatgaatgcgagatcggcgct
cataactgcgacatgcacgcggcctgcgtcaacgttcccggcagcttcaagtgccgctgt
cgtgacggctgggaaggcgacggaatcaaatgcatcgatgttgacgagtgcgtcactgaa
gagcacaactgtaaccccaacgccgagtgcatgaacacgccgggctcgtaccgctgctcc
tgcagggagggattcaacggagacggattcacctgctccgacatggacgagtgcgccgat
aacgtgaacctgtgtgagaacggccagtgtctgaacgctccgggaggataccgctgcgag
tgtgagatgggcttcaccccgactgaggacagcaaggcctgccaggacatcgacgagtgc
aacttccagaacatctgcgtgttcgggtcgtgtcagaacctgccggggatgttccgctgc
gtctgtgactacggctacgagctggaccgcagcggaggaaactgcacagacatcaacgag
tgtttcgacccggtgaactgcatcaacggcgtgtgtgtgaacctgcccggcagctacctg
tgcaactgcccgccagacttcgagctcaacccgtccggagtcggctgtgtcgacacgcgt
gtgggaaactgtttcctggacactctggaccgcggcgacggcgggatctcctgcagcgct
gagatcggagtgggcgtgacccgcgcgtcctgctgctgctcgctgggcggggcctgggga
aacccatgtgaactctgccctcccgtcaactccacggagtacaaaaccctgtgtcccgga
ggagaaggcttccgtcccaaccccatcacggtcatcctggaggacatagacgaatgccag
gagctgcccggcctgtgccaggggggaaactgtgtcaacaccttcggcagcttccagtgc
gaatgtcccgccggatactacctcaacgaggagacgcgcatctgcgaagatatcgacgaa
tgtacggcgcacatcggcatctgcggcccgggaacctgctacaacacgctgggtaactac
acctgcgtctgtccgcccgagtacatgcaggtcaacggaggaaacaactgcatggatatg
agaaagagtgtgtgctatcgcaacttcaacgacacctgcgagaacgagctgtccttcaac
atgaccaagaagatgtgctgttgcgcgtataacgtgggcaaagcctggaacagaccctgc
gaggcctgtccgaccccggccacctccgagtaccagcttctgtgcggaaatcaggttcct
ggtttcatcatcgacattcatactggaaaacccattgacatcgatgagtgtcgcgagatc
ccgggcatctgcgctaacggcgtgtgcatcaaccagatcgggagcttccgctgcgagtgt
cccatgggattcagctacaacaacatcctgctcatatgtgaagatattgacgagtgcaat
agcggcgacaacctgtgccagcgcaacgccaactgcatcaacatccccggcagctaccgc
tgcgaatgtttggccggattcaagctctctcccagcggagcgtgtgtggaccgtaacgag
tgtcaggagatcccgaacatctgcagtcacggtaaatgtatcgacactgagggcagcttc
cgctgtctgtgccacaacggcttcaagaccacgccggaccagaccatgtgtatggatatt
gacgagtgcgaccggcagccgtgtggaaacggcacctgtaagaacaccgtgggctcctac
aactgtctgtgcttccccggcttcgagctcacgcacaacaacgactgcatggatatcgac
gagtgcagcgttcatgccagtcaggtctgcaggaacggccagtgcatcaacagcatgggc
tccttcaagtgtctgtgtctggacggatataacctgacgccggacggcaagaactgcgtc
gatatcaacgagtgtgtgacgctgccgggcgcctgccagccgggaacctgccagaatctg
gacggatccttccgctgcatctgtcctcccggatacgaggtgcagaacgacaagtgtgtt
gacatcaacgagtgcaacgtggagccaaacatctgtcagttcggcacgtgtaaaaacacg
ccgggaagcttccagtgcatctgccagcctggcttcgtcctgtccgacaacggtcgccgc
tgtttcgacacgcgcgagagcttctgtttcacgcgctttgaatcgggtaaatgtacggtg
cccaaaccgctgaacaccaccaaagccaagtgctgctgcaacctgctgccgggcgaggga
tggggcgacccctgcgaactctgcccgcgcgagaccgaggctgcgtttcacacgttgtgt
ccctacggtcatgaggccgtcccgaatcccataggacgcgaagacatgaacgagtgcgtg
gagaacccgggcatctgcggcaacggcctgtgcatcaacaccgacggctcgttccgctgc
gagtgtcccttcggctacaacctggactacaccggcgtcaactgcgtggatacggacgag
tgctccatcggaaacccttgtggaaacggcacgtgctcaaacgttcctggcggtttcgag
tgttcctgtcaggagggctttgaacccggacccatgatgacctgtgaagacatcaacgag
tgcgccgtgaacccgctcctctgcgctttccgctgcgtcaacaccttcggctcgtacgag
tgcatgtgtcccacgggatacgtgctgcgcgacgacaaccggatgtgccgagaccaggat
gagtgcgctgaaggcctcgatgactgtgcgtccagaggcatggcctgcaaaaaccagatc
ggcaccttcatgtgcatctgtccgccgggcatgacgcgtcgccctgatggagaaggctgc
atggaccttaacgagtgccgcagcaagccagggatctgcaagaacggccgctgtgtcaac
acggtgggcagctaccgctgcgaatgtaacgagggtttcgagccaagctccacgggcaca
gagtgcatcgataacaggaagggcttctgtttcacggaggtcctgcagacgatgtgccag
cagtcgtccactaaccgaaacaccgtcaccaagtcggagtgctgctgtaacggcggccgc
ggctggggatcgctgtgtgagctctgccctctgcccggcaccgtacagtacaagaagatg
tgtccgctcggcccgggatacaccaccgacggcagagacatcaacgagtgtgaggtgatg
cccaacctgtgtaagaacggtcagtgcatcaacagtgtcggctccttccgctgccattgc
aacgtgggttataccgatgacttcactggcacttcctgtgtcgatatggacgaatgctct
cagtcacccaaaccgtgtaacttcctgtgcaagaacactgaaggcagttacctgtgctca
tgtcccagaggatacatcctacagcctgatgggaagacctgcaaagacttggacgagtgc
tcaaccaagcaacacaactgtcagttcctgtgtgtcaacacgatcggtggtttcacctgt
aaatgccccacgggcttcacgcagcaccagacggcctgcatagacaacaacgaatgcagc
aatcagccaaacgtgtgcggttcccgcgcctcctgcctgaacacccccggcagcttcaac
tgcgagtgtcagaagggcttctctctggacaccactggacacaactgtgatgatgttgat
gaatgtggcggaaaccaccggtgccagcacggttgccagaacatgctgggaggatatcgc
tgcggctgcccgcagggttatgttcagcattaccaatggaaccagtgtgtggacgagaac
gaatgcgccggtaaccaagtgtgtgggtcagcgtcttgctataacactctgggcagctat
aagtgcgtgtgcccatcaggtttcgactttgaggctgctgctggcggctgccaggatgtt
aatgaatgctccatgggcagtaacccttgcagctatggctgctccaacacagatggtgga
tacttgtgcggatgtcctgggggcttctaccgagcaggacaagggcactgcatcacagga
gcgggcttccagggtcagttcggctcggagggagtggatgatgaagagtcactttcaccg
gaggcctgctatgaatgcaagatcaatggtgacctgggaaagaaaggccgtaataggcgc
aatgctggtgataatgagctcaaggagacggtgagcatggccagcatggatgttcagacc
tccatccccatgaacctgagtctggcgcagctacaaaacaaagaacccctccttgagttg
cttccagctctggagccgcttgagcaccatgtgcgctacgtcataacgcacggaaaccag
ggcgaacacttccgcatcctggagcgccgtgacgggaagagcgttctgcggctgggccgg
aagccacccgctccaggtttgtaccgcctggagatcgccagcatgcgcctgtttggtccc
cgcaaacttcaggacctggaagaccagcacgacagcgactacttgctgggcgagatcggt
gatgcactgcgcatcaagctgcacatccacctgcactga
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integrated database retrieval system
