Ctenopharyngodon idella (grass carp): 127521495
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Entry
127521495 CDS
T08802
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127521495
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127521495
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127521495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127521495
NCBI-ProteinID:
XP_051766720
LinkDB
All DBs
Position
10:complement(24977799..25023967)
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AA seq
685 aa
AA seq
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MDDWEEDQSPVVSWNSGFGLGSSGTDGGFKSFYKGSAGNEKSNNEDSEGSSWRTSSGDGF
RGRGGRGGSRGGRGGLRNTFKSETDENGNDEGWKGGESRGRGRGGFRGGFRGGFRDGGDE
DTGRRGFGRETDENGNDEGWKGGEGRGRGRGGFRGGFRDGGDEETGKRGFGRGGFRGQNE
EVFSKVSTAGKVDQEAGENAGPKVVYVPPPPPEDENSIFSQFATGINFDKYDDIPVEVSG
SNAPKAIMTFDEAKLCESLSKNVTKSGYVKPTPVQKYGIPIISAGRDLMACAQTGSGKTA
AFLLPILQRFMTDGVAASKFSEVQEPEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVY
GGINTGYTIREVLKGCNVLCGTPGRLLDIIGRGKVGLSKLRYLILDEADRMLDMGFEPDM
RKLVGSPGMPAKEDRQTLMFSATFPEEIQRLAAEFLKVDYLFLAVGVVGGACSDVEQTII
QVDQYSKREQLLELLKTTGTERTMVFVETKRSADFIATFLCQEKISTTSIHGDREQRERE
KALSDFRTGQCPVLVATSVAARGLDIEHVQHVVNFDLPNNIDEYVHRIGRTGRCGNIGRA
VSFFNPESDTPLARSLVKVLSGAQQTVPKWLEEIAFSAHGTTGINPRGRLFASTDTRKGG
SFRTDEPPPASAPKPAAAADDEEWE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatgactgggaggaagatcagagccctgttgtatcctggaactcaggatttggtctg
ggctctagtggtactgatggaggattcaagagcttctataaaggaagtgcaggaaatgag
aaatctaacaatgaagatagtgaaggcagctcatggaggacgagttctggtgatggattc
agaggcagaggaggcagaggaggatcccgaggagggagaggcggcttaaggaataccttt
aaatcagaaactgatgaaaatggcaacgacgagggttggaaaggaggtgaaagccgagga
agaggccgcggtggtttccgtggtggttttcgtggtggtttccgtgatggtggtgatgaa
gatactggaagaagaggctttggaagagaaactgatgaaaatggcaatgatgaaggttgg
aaaggaggtgaaggccgaggaagaggccgcggtggtttccgtggtggttttcgtgatggt
ggcgatgaagagactggaaaaagaggctttggaagaggaggtttcagaggccagaatgag
gaagtgttttccaaggtctcaacagcaggcaaggtagatcaagaagcaggtgaaaatgca
ggacccaaggttgtctatgtgccgcctccccctccagaagacgagaattccatattttcc
caatttgccacaggcattaattttgataaatatgatgatatccctgtggaagtgagcggc
agcaatgctccaaaagcgattatgacttttgatgaagcaaagctttgtgaatcactgagc
aagaatgtaacaaagtctggatatgtgaagccaactcctgtccagaaatatggaatcccc
attatttctgctggacgagatctaatggcttgtgcccagaccggatcaggaaaaacggcg
gccttcctgctgcccatcttacagcggtttatgactgatggagtggcagccagcaagttc
agtgaggtgcaggagcccgaggccataatcgtggcccccaccagagagcttatcaatcag
atctatctggaggccaggaagtttgcatatgggacctgcgtgcgtcctgtggtggtttat
ggtggtattaatactggatatactattcgagaggtgttaaagggctgcaatgttttgtgt
gggacccctggaagattgcttgacatcattggtcgtggaaaggttggcctcagtaagtta
cggtatttgattctggatgaagcagacagaatgctagacatgggctttgagccagatatg
cgcaagctagtgggatctccaggaatgcctgccaaagaggatcgacaaaccctcatgttc
agtgccaccttccctgaagaaattcaaaggttggcagcagaatttttgaaagtggactac
cttttccttgctgttggtgtggtgggtggagcatgcagtgatgtggagcaaacgatcatt
caggtggaccagtactccaagagagagcagctgcttgaactgctcaaaactacggggact
gaacgcacaatggtctttgttgaaaccaaaagaagtgctgacttcatagcaactttcctc
tgtcaggagaagatctccactacaagcatccacggtgatcgggaacagcgggagcgagag
aaagctctcagtgactttcgcacaggccagtgtccagtgctggttgccacatctgtcgct
gccagaggcctggacattgagcatgtgcagcatgtggtaaatttcgacctgcccaacaac
atcgatgaatatgtccatcgcattggaagaaccggacgctgtgggaacattggtcgggcc
gtgtccttttttaacccagagtcagatactccattagctcgctctctggtcaaagtcctt
tcaggggctcaacagacggttcccaaatggctggaagaaatagctttcagtgctcatggg
acaacaggcatcaacccacgtggaagattgtttgcatctacagacacacggaagggagga
tccttcaggacagacgagccgccaccagcatccgccccaaaaccagcagccgcggcagat
gatgaggaatgggaataa
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