Ctenopharyngodon idella (grass carp): 127521564
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Entry
127521564 CDS
T08802
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127521564
03041 Spliceosome [BR:
cide03041
]
127521564
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127521564
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
127521564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127521564
NCBI-ProteinID:
XP_051766873
LinkDB
All DBs
Position
10:complement(35881246..35893227)
Genome browser
AA seq
1013 aa
AA seq
DB search
MDAVNAFNHELFSLMDTKPPISRAKMISITKSAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVVDSIVRQSRHQFGAEKDVFGPRFTKNIAGTFENLCLCPTEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSSSSTGLDNGPDAASPQSPVREQEAHPVSTANSATAAVPQLQT
SDAFAAVAQLIQSSQGQQLQQILQNFQPPGKPQSPAVDNNRSHLHLQAQAATATSSTLTH
QHIHPTQQPVEKKATFDKTLLDRFDYDDEPEAGDEAKKDETPSVQPTMGFPEQTVPGFPQ
ANQMQQFQQHMMTVSQRQQVGLPSNGQVQGFGLMTSQPYPGMMPPMGQPHAAFPPQNDTF
NQLVAGHQHQEMMNSDASARPFPDGKRSRSRSGSRSPKRRRSRSNSRTRRMRHRRSRSRS
RERRRQSPRSRSQERRDREKERERRQKGLPPIKNNTLSVCSTTLWVGQLDKRTQQQDVAC
LLEEFGQIDSINMIPPRGCAYIVMIHRQDAYRALQKLSRGPYKVNQKAIKIAWALNKGIK
AEFKQYWDVELGVTYVPWSKVKMEDLDVFREGGMLDPDTLAPEWRSSQIELEKAEESQNG
RPEVGKVEETPAVVPMQVPPVQPMGAVGVPPPGFSGPMNIPPPSFPPGVPPPPGPFIRPG
FNPMQMPPGFLPPGAMPPLGATGPPPPTAGIGMPPVGSSVEDLSNDPAGMGPRINNDGTD
GFNSGNQVPPGGPPGMGMQSPPGLLGSRPGMMPLQRPPGMPPPHMQRFPIPPPRPGMPPI
PPQMMPPRGPPQMMHREPPPGTFGMPPPPHGMRGPFPPPGPPFMRPSGPGPRPDGPSDHE
ARPFRGERPGLGRGRDREQDWYGGRRPFGEGRGGERPDSRERFGGWHEEPEKQGGWDRER
ERRDWRRSPDGERDRDRDRGRDGEERTRRSAGSRERSTRWDRDDRLDRLGLTSEEPNERL
AASTNEPSANSTKELPEAKPDVPAPSTAATADSQDSEPIAENKSAEQTHKEES
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtcaacgcttttaaccatgagttgttctccttgatggacacaaagcctccc
atctcaagggccaagatgatctctatcaccaaatctgccataaaagccattaaattatac
aagcatgttgtccaaattgttgaaaaattcataaagaagtgcaaacctgagtacaaagtt
ccagggctctacgtggtggattccatcgtgagacagtcacggcatcagtttggtgctgaa
aaagatgtgtttggacccaggttcaccaaaaacattgctggaacatttgagaatttatgc
ttgtgtcccacagaagatcggagtaagattgtgagagtgctgaacctgtggcagaaaaat
ggagtgtttaagatcgaagtaatccagcctctcttggacatggctgctggatccagcagc
tcaacaggcttggacaacggccctgatgcggcatccccacagtctcccgtgagggaacag
gaggctcatcctgtgtcgacagcaaactcggccacagcagctgtgcctcagcttcagacc
tcagatgcctttgcggctgttgctcaactaattcagtcttctcaaggacagcagcttcag
cagattctgcagaactttcagccaccggggaaacctcagtctccagctgtggacaataac
aggagtcacctccacctacaggcccaggctgcgactgccacctcctccaccctcacacat
cagcacatccatcccacacaacagcctgtggaaaagaaagccacatttgacaagacgctt
ctggaccgctttgactatgatgatgagccagaagccggggatgaagccaagaaggatgaa
acgccgtctgttcaacctactatgggatttcctgagcagaccgtcccaggatttcctcaa
gccaatcagatgcagcaatttcaacaacatatgatgactgtatcacagcgccaacaggtt
ggtctaccttcaaatggacaagtccaaggctttggtcttatgacctctcagccttaccca
ggcatgatgcctccaatggggcagccgcacgctgctttccctcctcagaatgacaccttc
aatcagctcgtggctggacatcagcatcaggaaatgatgaattcagatgcgtctgccagg
cctttccctgatggcaaaagatcaaggtcacgttcggggtcgaggtctcctaaaagaaga
aggtctcggtccaattctcgcaccagacgaatgcggcatcggcgatctcgctcccgttct
cgagaacggcggcgtcagtcacctcgctcacggtctcaggaaaggagagacagagaaaag
gaacgagaacgaagacagaaaggccttcctcctataaagaataacactctgagtgtgtgc
agtacaactctatgggtgggtcagctggataagaggacgcagcagcaggacgtggcctgt
ttactagaggagtttgggcagatagattcaattaatatgattcctcctcgtggttgtgcc
tacattgtcatgatccatcgtcaggatgcctatcgagccctgcagaaactaagcagaggt
ccatacaaagtcaaccagaaagccattaagattgcctgggctctgaataagggcattaag
gctgagttcaagcagtattgggatgtggaattgggtgtaacctacgtaccatggtccaaa
gtaaagatggaggacctggatgttttcagagaaggagggatgctggaccctgatactctt
gcaccagagtggcgaagctctcagattgagctagagaaagctgaagagtctcagaatggc
agacctgaggtgggaaaagtagaggagaccccagctgtagtacctatgcaggttcctcct
gtccagccaatgggagcagtcggtgtcccaccaccaggattctcaggacccatgaacatc
ccacccccctcattcccacctggggttcctccacccccgggtcccttcatacggccagga
tttaaccccatgcagatgccaccagggtttctccccccgggtgccatgcctcctctgggt
gccaccgggccgcctccacctacagcagggattggcatgcctccagttggcagctcagtt
gaagacctttcgaacgatccagcaggtatgggcccaagaatcaacaatgatggaacagat
gggttcaactcaggaaaccaagtgcctcctggaggtccaccagggatgggaatgcagtct
ccaccaggtcttctaggttcaaggccgggtatgatgcctctccagcggcccccagggatg
ccacccccacacatgcaacgcttccccattccacctcctcggcctggtatgccacccatc
cccccacagatgatgccacccaggggtccacctcagatgatgcaccgtgagccaccacct
gggacctttggcatgccaccccctcctcatggcatgaggggccccttcccccctcccgga
cctccctttatgagaccgagtggacccggacccagaccagacgggccgagtgatcacgag
gcgaggccgtttagaggcgagcgccccgggttagggaggggcagagatcgagagcaggac
tggtatggaggacggcgcccttttggcgagggtcgtggcggggagaggccagacagccgt
gaaagatttggaggctggcatgaggagccggaaaaacaaggcgggtgggaccgagagagg
gaacgcagggactggaggagaagtccggacggagagagggatcgggatcgagatcgagga
cgagatggtgaagaacggaccaggcggtccgcagggagcagagagagaagcacacgctgg
gaccgagacgatagactcgatcgactgggtcttaccagcgaggaacccaacgagagactc
gcagcgagtaccaacgagcctagtgcaaactctactaaagaacttcctgaagccaagcca
gatgttccagcaccttccactgcagccacagcagactcacaagactcagaacctatagca
gaaaacaaatctgctgagcaaacacataaagaagagtcatag
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