Ctenopharyngodon idella (grass carp): 127521610
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Entry
127521610 CDS
T08802
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127521610
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
127521610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
I-set
CarboxypepD_reg
TSP1_spondin
Ig_2
CarbopepD_reg_2
ig
TSP1_CFP_C
TSP1_ADAMTS
Ig_5
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
127521610
NCBI-ProteinID:
XP_051766919
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All DBs
Position
10:complement(12062933..12078936)
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AA seq
1255 aa
AA seq
DB search
MWDFTVVTLVLSTVLVVSLAQGPIWDSSHLQRLNKTDRNKKLAYNSLMEPQTTGVTEWTS
WFNIDHPGGNGDYERLEAIRFYYRERVCSRPVAMEARTTDWVAAADTGEVVHSSLEKGFW
CINKEQPLGRSCSNYHVRFQCPPVHSYWTDWSEWTPCSATACNDVGIQVRQRKCMSTQPL
PLLLSPVCVGPHIERRECSTPPCQALWSQWGSWSACSVTCGKGRRTRRRTCHRSSTKIQC
TGRPAEVQKCGNPCPVACKRVCPGGRPNKDCSYCICDGQTLHGEVFTVTGVPVADATVAL
ASQAKVIRAHTDSKGQFKIEGLCTNPQSQVIIRKDKFAPITLPVSINSTDELWVRAVLRS
SEKPYIEKHPEDKVRYEGQRATLCCRATGTPKPDKYYWYHNGTLLNRTKYKYDEDLILRD
LKPEQSGQYHCKATSLTGSIKSTAAVLTVFAKGSPACNSTPDSYLIKLPFDCRQPGTDSK
FYNAGRCPHNKCPGSLDFDMRCRDGSGFCCGVKQMDTREINCGRYTLPIKVVSECGCQTC
VEPKVLVRGRVVATDNDEPLRFGHIYIGKERIGTTGYQGGFTIQVSPDTQRLVVNFVDPS
QKFIDTIKVFIFDKRGGSVYHDVKVMRKQEPIDINAAESNTIYLGEIKGENPIGQLVIPP
NSFHKNTGEVYEGTVKASVTFLDPRNITMAAAAPGDLNFVDDEGDMLPLRTYGMFSVDFR
DGENQEVLGAGAVQVLLDSEHVKMQEHIPAMKLWSLNPDTGIWEEESNFQPTQSTIAGSG
RNKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLPNEQLEGVVINLINL
EPKPGYSSNPRAWGRFDSVITGPNGACLPAFCDAQRPDAYTAYVTAIMGGEELEAAPSMP
KMNPNIIGVSQPYLGKLDYQRSDHEDPALKKTAFRINLAKPNPNNFDETNGPIYPYQSLI
GCENAPVDANHFRFFRVEKDKYEYNVVPFQESDLTSWTGDYLSWWPNPQEFRACFIKVKI
HGATEIMVRSRNLGGTHPQTRGQLYGIRDIRSTRDLNHPNTSAACLEFKCSGMLFDQGIV
DRSLISVIPQGNCRRIGINGLLQEYLIKHPPVLQNNESHVFNMLAPVDPLGHNYGIYTVT
DQNPRVAKEIAIGRCFDGTSDGFSREMKSDSGVALTFSCPKRTVNRESLFQRLQTNPGLT
LTQMAREMRESQGLQVRRGSTQMVAYPFGQQGRSQNRRATNTNRRRPATRTQPRQ
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacttcacagtcgtgacgctggtgctgtctaccgtcttagttgtgtctctggca
caaggacccatctgggacagctcacatcttcagaggttaaacaaaacggacaggaacaaa
aagctggcttacaacagccttatggaaccacagaccacaggcgtgaccgagtggacatcc
tggttcaatatcgaccatccgggaggaaacggcgactacgagaggttagaagccattcgc
ttctactatcgggaaagggtctgctcacgacctgtagccatggaggcccgtaccacggac
tgggttgcagctgcggatacaggggaggtggtccattccagtctggagaagggcttctgg
tgcatcaataaggagcagccgcttggtcgcagctgctccaactaccatgtgcgattccag
tgtccaccagtccactcatactggaccgactggagcgaatggacgccttgctctgccact
gcctgtaacgatgttggcatccaagtccgtcagaggaagtgcatgagcacgcaacctctt
ccgttgctgctttcgcccgtctgcgtgggacctcacatcgaacggagagagtgttcaacc
ccaccatgtcaagccttgtggagccagtggggttcatggagtgcttgttcagtgacctgt
gggaagggacgcaggacaagacgtaggacatgtcacagatcttcaactaagattcagtgt
acaggacgacccgcagaggtccaaaagtgtggaaatccatgcccagtggcatgcaaacgt
gtctgtcctgggggacgtcccaataaggactgcagctactgtatctgtgatggacagaca
ctacacggggaggtcttcaccgttacaggtgtcccagtggctgacgccacagtggctctg
gccagccaagccaaggtcatccgtgcccacactgattccaagggtcaattcaagattgaa
ggactgtgcaccaaccctcagagccaagtaatcataaggaaggataaatttgctcccatc
actctccctgtttccatcaacagcactgatgaactctgggtacgggccgtcttacgatcc
tcagaaaagccatatattgagaaacatcccgaagacaaagtacgttacgagggacaacgt
gcaaccctttgctgtagagccacaggaacaccaaaacctgacaaatattactggtaccac
aacggaactttattgaatcgcacaaaatacaagtacgatgaagatttgatattgcgggac
ctaaaaccagagcagtcagggcaatatcactgcaaagcaactagtctgacaggcagcatc
aagtctactgcagccgtcctcactgttttcgctaaaggatcaccagcatgcaactcaaca
cccgattcttacttgatcaaattgccatttgactgcaggcagccaggaacagactccaag
ttttacaatgcaggtcgctgtccacacaacaaatgccctggatcactggactttgacatg
cgctgcagggatggatccggcttctgctgtggggtcaaacaaatggacactagagagatc
aactgtggccgttacaccctgcctatcaaggttgtgagtgaatgtggctgccagacctgc
gtggagcccaaagtccttgtacggggcagagtggtggcaacagacaatgatgaacccctt
cgctttggacacatttacatagggaaggaacggataggtaccacgggatatcagggtggg
ttcacaatccaggtgtctccagatacacagcgtcttgtggtaaactttgtcgacccttct
cagaagttcatcgacacaatcaaggtttttatttttgacaaaagaggaggttcggtctat
catgatgtaaaagtgatgaggaagcaagaacctattgatatcaatgctgccgaaagcaat
accatttacctaggtgaaattaaaggcgagaaccctatcggtcaactggtgatacctcca
aattctttccataaaaacacaggagaagtgtatgaagggaccgttaaggccagtgtcacg
ttccttgacccacgcaacattaccatggctgctgctgcccctggtgatctcaactttgta
gacgatgaaggagacatgctccctctcaggacatacggaatgttttcagtagatttccga
gatggggaaaaccaggaggttctaggagccggcgcagtccaagttctccttgattcagag
catgttaagatgcaggagcacattcctgctatgaaactctggtccctcaatcccgacaca
ggcatttgggaagaggaaagtaactttcaacccacacaaagtaccattgctggcagtggg
aggaacaaacgagaggagcgcaccttcctgataggaaatatggaaatcagggagcgtagg
ttgttcaatctcgatgtacctgaaaatcgccgctgctatgtcaaggtgagggcgtacatg
agcgacaaattcctgcccaatgagcaactagaaggagtggtaataaacttgataaacctg
gagcccaagcctggttactcgtcaaatccaagggcatggggtcgctttgatagtgtgata
acaggaccaaatggtgcttgtcttccagctttctgcgatgctcagaggcctgacgcatac
acggcttacgtcacggctataatgggaggtgaggaattggaagcagccccctcaatgcca
aaaatgaacccaaacattattggcgtgtctcaaccttacttagggaagttagattaccag
cgctcagatcacgaggatccagcacttaagaaaacagctttcagaatcaaccttgccaaa
ccaaaccctaacaattttgatgaaacgaatggtccaatctatccttaccagagtttaatt
ggatgtgaaaatgcacctgttgacgccaaccactttcgtttcttccgtgtcgaaaaagac
aaatacgagtacaatgtggtaccctttcaggagagtgacctcacatcttggactggagac
tacctttcctggtggccaaatccacaggagttcagggcttgcttcatcaaagttaagatt
catggagctacagaaatcatggtaaggtcaagaaaccttggtggcactcatcctcaaaca
aggggtcagttgtatggcattagagacattcgtagtacccgtgacttaaaccatcccaac
acctctgctgcttgtcttgagttcaagtgcagtgggatgctctttgatcaaggtattgta
gacaggtcactcatttctgtgattccacaaggcaactgccgtcggataggcatcaacggt
ctcctgcaagagtatctaataaagcatcctcctgttcttcagaacaatgagtctcatgta
ttcaatatgttagctcctgttgatccccttggacacaattacggaatatataccgtcact
gaccaaaacccacgtgttgccaaagagatcgccattggccgttgctttgatggaacttca
gatggtttttccagggagatgaagtcagattctggagtggcactaacgttcagctgccct
aaaagaactgtgaatcgtgagagtttattccagcgcttgcaaacaaatcctggcctaaca
ctaacacagatggcacgggagatgagggagtcccagggattgcaagtcagaagagggtca
acccaaatggtggcctacccctttggccaacagggcaggagccagaaccgcagagccact
aacactaacagaaggagacctgctacaaggacacaaccaagacagtag
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