Ctenopharyngodon idella (grass carp): 127521638
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Entry
127521638 CDS
T08802
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127521638
Membrane trafficking [BR:
cide04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127521638
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_LRWD1
Ig_2
LRR_14
LRRNT
V-set
Cupin_1
LRR_9
Ig_6
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
127521638
NCBI-ProteinID:
XP_051766942
LinkDB
All DBs
Position
10:10751728..10785954
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AA seq
605 aa
AA seq
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MAGCPCLSLPGLLVLLIAASITHGQSCPQRCDCISHQRAVMCQNKRLGSIPAGIPADTRL
LDLSCNSLRWVEYNELATLSRLEELDLSENLISVLEPNAFSSLLNLRVLRLRANQLKLVP
MGAFSRLTNLTTLDLSGNKLVILLDFTFQDLKNLRNLEVGDNDLVYISNKAFLGLVGLRE
LTIERCNLTSITGQSLSYLRGLVTLRLRYLSIASLEEQNFRKLGGLRGLEIDHWPFLEYI
SPHSFQGLNLSWLSITNTNISTVPTGALRNLIHLASLNLSYNPISVLESWALRDLVRLKE
LHLVGTNLISVQPYGLGGLQQIRLLNLSNNGLVTLEEGSFHSVNTLETLRVDGNPLSCDC
RLLWILQRRKTLNFNGKSPVCATPLEVRGKALSTFSDSALFDHFTCQRPKIRNRKLQQLT
AREGQVVSFICRAEGDPTPVIFWISPQRRRITTKSTGRVIVLPEGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVSGLPLDGALAANRTYYVGDLNDTNLNDTRVFLKFTLDLKTI
LVSTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGGARKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgtccatgcctgagcttaccggggctgcttgtgctcctaatcgctgcatcc
ataacacatggtcagagctgcccacagcgctgtgactgtatctctcatcagagagctgtg
atgtgccagaacaagcgcctgggatctattcctgcgggcatcccggctgacacacggctg
ctggatctgagttgtaacagtttgcgctgggtggaatacaatgaattggcgactctctcg
agacttgaggagctagacttgagtgaaaatctcatcagtgtattggagcctaacgccttc
tccagcttgcttaatcttagagtgttgcgtctgcgagccaaccagcttaaacttgtgccc
atgggtgccttttctcgtctcaccaacctcaccaccctggacctaagtgggaataaactg
gtcatcctgttagacttcaccttccaggacttgaagaacctccgcaatttggaagttggt
gataatgacctggtgtacatttcaaacaaggctttcctgggattggtgggacttcgggag
ctaaccatcgagaggtgcaatctgacttctataactggacagtctctttcctaccttcga
ggcttggtgactcttcgattacgctacctcagtatagcttcgttggaagagcagaacttt
cgcaaactgggtggactgcggggtcttgagattgaccattggcccttccttgagtacatt
tctccgcacagcttccaaggcctcaacctttcttggctctcaattaccaacaccaatatt
tccaccgtgcctacgggtgctcttcgcaacctaattcacttggctagcctcaatctgtct
tacaaccccatctcggttctcgagtcctgggccttgcgggaccttgtccgcttgaaagaa
ctgcacctagttggtaccaacctgatatcagtgcagccatatggtcttggaggcctgcaa
cagatacgattgctcaacttgtcaaacaatgggttggtgaccttggaggagggatccttc
cactcggtcaatacgctggagacattgcgtgtagatggcaaccctttgtcctgtgactgc
cgcctactgtggatcctgcagcgtcgtaagaccctcaacttcaacggaaagtcacccgtt
tgcgccacacctttggaagtgcgaggaaaagcacttagtaccttttcggactctgcgctc
tttgaccatttcacctgtcagaggcccaaaattcgtaaccgcaagctgcagcagctgacg
gcacgtgaaggccaggtagtgtcctttatatgtagagcggaaggagacccaactccagtc
atcttttggatttcacctcaacgccgacgtatcaccaccaagagtactgggagagtcatt
gtcctccctgaaggtacgttggagatccgttatgcccaagtaacagacagcggcacttac
atctgcatagcaagcaatgctggtggcaacgatacctactttgccaccctcacagtcagt
ggattgccactggatggtgctttggcagcaaatcgcacctactacgtgggtgatcttaat
gacactaacttaaatgacacgcgtgtcttcctgaagttcacattggacctcaagaccatc
ctggtgtccacagcaatgggttgtattatgtttttgggtgtggtgcttttctgtttcatt
ctcttgtttgtgtggagccgaggacgaggacaacacaagaacaatttctcagtagagtat
tcattcagaaaggtagatggacctgctgccagcgggggtcaaggaggagcacgaaagttt
aacatgaagatgatataa
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