Ctenopharyngodon idella (grass carp): 127521682
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Entry
127521682 CDS
T08802
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127521682
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cide04091
]
127521682
Lectins [BR:
cide04091
]
C-Type lectins
Lecticans
127521682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Calx-beta
Lectin_C
Motif
Other DBs
NCBI-GeneID:
127521682
NCBI-ProteinID:
XP_051767013
LinkDB
All DBs
Position
10:complement(12832437..12860052)
Genome browser
AA seq
2147 aa
AA seq
DB search
MGVFILSLTLLSLSHLWSHVQASSLVRINAGLRVARGQSVFVTVGELQFHKDWISEACKV
EVVLTEPVTQRVGKLTPQVFDCQFLPDEVKYVHNGSPLLEEDMVMLRVYRFTETQTFVET
VLLKVHVVEPQRSLTELGNVPLVVPEFYSLSNAINSSVLTFKTQPDVICTVRLLSPEINV
PMLGQLVVEDPETMLATEAGPRKGRHTGITCPGNKACDHNTREVEFLKTDCAEFLTSGLK
YQHLSPPSPEIDYIPIRVEFRDQNSRALLETESIWIPVLIQGAMQNQPPHAAFMSTFILE
VDQFILTPMTTAALDAKDDETSQAQLIFNVTKPPAEGYITHLDDHTKTASSFSWQDLNEM
KIAYQPPNSSHTARRNYEVEFQAIDGSFVPSLPILMHISIRTAETNAPRVSWNMGLDLLE
GQSRPITWEHLQVVDNDNIDAVTLIAMDGPLNGHLSVRGGKGFMFKVKDLREGVVVYHHS
DSDTTRDYVVFRITDGRHSIRHKFPIYVLPKDDTPPFLINNVAFEVQEGGMVRVEEYMLM
ASDLDSSDDYIQYQLITFPRAGQLVKKSSPHEPGVPVKSFLQRDLFQGLIYYKHSGEEVF
EDSFDFILSDVHQPPNLSDRHTVVIHVFPVKDQLPEEVSGTVRSITVKETEVVYITQSHL
HFRDTEHSDTDLMYVITHPCFSPGNTRLSDAGRLFYTDSTNSMKKDAMVPVLKSFTQHAV
NHHKVAYMPPIEDIGPEPLFVQFVFSVSDQQGGALTGLTFNITVTPVDNQAPEMFTNLLR
VEEGGGSFLMEEHLLVQDVDSSEDQLRVHVKTRPQHGRLELLGTALLVGDSFSLQDLKAL
RVRYIHDDSETLKDSIGLTITDGINSAHGMLFVQILPVNDEPPQLGSNLRAELSCKEGGQ
VQITVEYLSATDVDSEDTRLTYMLARTPARGVLQRNGVTVDKFSQLDVLNGLIFYLHTGG
EIGPDPVLDTVTLIVSDGEAGTMDGCCQEDAVPPPVPLHGTLPVYDLNITVMPVNNQVPT
ITLGNMFVVDEGASACLCGGVLMATDPDSHPDQLMFHLVTPPQYGFLENTLPSPGFEKSN
AGLQVVSFSQLHLSSGFINYVQSVHQGVEPTADFFTISVSDGIQRSAPLPFYVIINPTND
ETPSLLLSNFTVMEGGMKDLSPDILNAVDIDIPADTLILTILVPPTHGKLLNGIYGLEMK
RYKNMNPEVLQRTLAIQSFTLQELQQGMKIMYMHDDTETLKDAFTIQLTDGGHTVQGTAC
VRIIPVNDEKPWLLKNAGVEVEALEKRVISSVVLEAGDNDTPNNHILYILNAGPRFGILQ
LRTEAGWIDLSPGQNFTQEDVEMNRLWYTHTTVNGFKGHDRFHFVLSDGENRTPPQSFFI
SVRTVQKGDIALITKPVTLMEGERVILTTDILTAADSGSKPNELIYTVSVPPEHGHLHMV
QIPGVPVLSFSQMDVAANRICYTHDNSRFADRDSFSFVVTNGVTSRSSTILFAVEHSDRI
PPTLSINKGLELTENSMKTISTNDLKLTDPDTALENLTYIVIQSPQYGKLLLKGLPLSKP
HFTQLDINNMDLAYHHLNGRAKIDRFTFQPTDGTNAGYLEYGQLKSEPAVFTIQIEIMDK
TPPSIVNKGIPSTVENLPGGKQGIYITFKELQASDPDSPDDTLEFTITRPPHFGYLENAL
TGAYIKGRFTQKDLDQKAVRYVIAADMEVTADSFEFQVTDPAGNTMLPEVMELRWSRVEL
SASCYRVCENAGTLAVQVVRSGNSKDPAYIGIQVEEGTAKVGKDFTHSSASLIQFDPGVH
VKMWNIYLKDDGLEENHEKFDVVLKTPKNTVLGQRNKATVEIVDPRNGKCNPGDLVVEED
EKQHPFQSPPHIQEPEPPLLEEYTPDPRSGIHWENYPPRGDVPYRTHFSHFSVGEPQDQE
VFHSQGQRQLRILGRNRHRVSQAHMSETNNRNQERVWRFHGLIPVRLEEKVAVPRVHSEL
EITPIWTWPGYAADAESVETPQRDSASFVIDSGVQQHKSQKSVSIGCPNGWTHYRRNCYV
LGPGVASWSSAQQACMLLESQLSSIHSKTDMKWIWKFAGKQSFWIGLTGGPKQWSWIDGK
PLTFSKLRKDHTSSACVLAQSQKIWIPQSCTDGSEHRYVCSAPAQIS
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgttcattctctctttgacattgctctccttgagtcatctgtggtcacatgtc
caagcttcgagtctggttcggataaatgcaggtcttcgggtagccagaggccagtctgtg
tttgtcacggttggtgaacttcagttccacaaggattggatatctgaggcctgtaaggta
gaagtggtgcttaccgagcctgtcacacaaagagtggggaagctgactcctcaggttttt
gactgccagtttttacctgacgaggtgaaatatgttcacaatggcagtcctcttcttgag
gaggacatggtcatgctgagggtctacaggtttacagaaacccagacttttgttgagact
gtgctactaaaggtacatgtggtggaacctcagaggagcctcacagagcttggaaatgtt
cctctggtggttcctgagttctacagcctttccaatgccatcaacagtagtgtccttacc
tttaaaacccagcctgatgtgatctgcacggtacgtcttctcagccctgagatcaacgtt
ccaatgcttggtcaactggtcgttgaggatcctgaaacaatgttagccactgaggctgga
ccaagaaaaggacgtcatactggaatcacctgccctggaaataaagcgtgtgaccacaac
acaagggaagtagagttcttgaagaccgactgcgcagagttcctcacttcaggtctgaag
taccagcatctcagtcctccatcacctgagattgattacatcccaatcagggtggagttt
agggaccagaactcccgagccttgctggagactgagagtatctggatacctgtactgatc
cagggggccatgcagaaccaacccccccatgctgccttcatgtctacattcatcctggag
gtggatcagttcatcctcacccccatgaccactgctgccctggatgccaaagatgatgag
acctctcaggcccaactcatctttaacgtgaccaaaccaccagcagagggatatataact
catttggacgaccacactaaaactgcatcatccttctcatggcaagacctgaatgagatg
aaaatcgcttatcagcccccaaacagcagccacacagccaggaggaactatgaggttgag
tttcaggccatcgatggctcattcgtgccgagtcttcctatcttgatgcacatctctatc
cgcactgcagagaccaatgcccctcgagtctcgtggaatatgggcttggatttgttggaa
ggccaatcaagaccaatcacatgggagcacctacaggttgttgataatgacaacatagat
gccgtcaccctgatagctatggatggccctcttaatggacacttaagtgttagaggtgga
aaaggcttcatgtttaaggtcaaggatctcagagagggcgttgtggtctatcatcattcg
gacagcgacaccaccagggattatgtcgtcttccgaatcacagatggccgccacagcatc
agacacaaattccccatctatgttcttccgaaagatgacacccctccttttttaatcaat
aacgtggcctttgaggtccaagaaggtggcatggttagggtggaggagtacatgctgatg
gcctcagacttggactccagtgatgactacattcaatatcagctgattacttttcccaga
gcgggacagctggttaaaaagtcttctccacatgaaccaggtgtcccagtgaagagcttc
ctgcagagggacctttttcaaggtctaatctactacaagcactcaggggaggaagtgttt
gaggactcattcgatttcatcctgtcagatgtccatcagcctccgaatctatcggacaga
catactgtggtgatccacgtgtttccagtgaaggaccagttgcctgaggaagtttccgga
acggttcgctccatcacagtgaaggaaaccgaagttgtttatatcactcagagccatctg
cactttagagatacagagcattcagatactgaccttatgtatgttatcactcatccttgc
tttagtccaggaaacaccaggttatcagatgcaggcaggctgttttatactgacagcaca
aactccatgaaaaaagatgcaatggttccagtgcttaagtcctttacccagcatgcagtg
aaccaccacaaagtggcttacatgcctccaattgaggatattggccctgagcctcttttt
gtgcagtttgtgttttctgtgagtgaccagcagggcggcgctctcacaggactcaccttc
aatatcacagtcacacctgttgacaaccaggccccagaaatgttcactaacttgctgagg
gtcgaggaaggtggcggtagtttcttgatggaggagcacctgttggtgcaggatgtggac
agttcagaagatcagctcagggtacatgtgaagactcgaccccagcatgggagactggag
ctgttaggcacggcactgctagtgggagacagcttcagtctgcaggacctcaaagcattg
agggtcagatacattcatgatgactctgagaccttgaaggatagcattggtcttactatc
acagatggaatcaactctgcacatggaatgctttttgttcagatcctgcccgtgaacgac
gagcccccacagttaggctccaacttgagggctgaactgtcctgcaaagaggggggtcag
gtccaaattacggttgagtacctctctgctacagatgttgacagcgaggacactcggcta
acatacatgcttgccagaacacctgcacgtggggtgctacagcgaaatggggtcaccgtg
gacaagttctcccagctggatgtgctcaatgggctcatcttctacctgcacacaggtggt
gagattggaccagatcctgtcttggacactgtcactctcattgtgtcagatggagaggct
ggaacaatggatggctgctgccaggaggatgctgtccccccacctgtccccctgcatggc
acgcttccggtctatgacctcaacatcactgtgatgcctgtcaacaaccaggtcccaacc
ataacactgggtaacatgtttgtggtagatgagggtgccagtgcatgtctgtgtgggggt
gtgttgatggccactgatcctgacagtcatccagaccagctcatgtttcacttggtgacc
ccaccacaatatgggttcctggagaacacccttccatcccctggctttgagaaaagcaat
gctggactccaagtggtttctttcagccagctccacctcagttcgggtttcatcaactat
gtccagtcggtgcaccagggtgtggagcctacagcagacttctttaccatcagtgtcagt
gatgggattcagagatcagcaccattgcccttctacgtcatcatcaaccctaccaatgat
gagaccccatcactgctgcttagcaacttcacagtcatggaaggagggatgaaagacctc
agtcctgatattctaaatgcagtggacattgatattccagcagatactcttatcctgacc
atcctggttcccccaacccatggcaaactgctcaatggcatatatggtcttgagatgaaa
cgttacaaaaacatgaacccagaggtcctccaacgaaccttagcaatccagtctttcacc
ttgcaggagctacaacaaggaatgaagatcatgtatatgcatgacgacacagaaaccctc
aaggacgctttcaccatacagttgacagatggtgggcacacagtccaggggactgcgtgt
gtccgcatcataccagtcaatgatgaaaagccatggctactaaaaaatgcaggtgtggag
gtcgaggccctggagaagagagtcatctccagtgtagtgctggaggcaggagataatgac
acgcccaacaaccatattctctacatcctcaatgcaggtcccagatttggcatccttcaa
ctcaggacagaagctggatggattgatctgagtccaggtcagaattttacccaggaagat
gtggagatgaatcgcctgtggtacactcacactacagttaatggtttcaaaggccatgac
aggtttcactttgttctcagtgatggggaaaacagaacacctccacagagtttcttcatc
tctgtccgcactgttcaaaagggtgacattgctctaatcactaaacctgtgaccttgatg
gagggggagagagtcattctgaccactgacattctgacggccgcagacagtggaagcaag
ccaaatgagctcatatacactgtatcagtcccacctgaacatggtcacctgcacatggtc
caaattccaggggttccagtgctctccttctcccagatggatgtggctgccaaccggata
tgctacactcatgacaacagccgttttgctgaccgtgattctttcagctttgtcgttacc
aatggtgtgacgtccagaagcagtactattcttttcgctgtggaacacagtgaccgtatt
ccaccaaccctgagtatcaacaaaggccttgaactcacagagaactctatgaagaccatt
tccactaatgacctgaaactgactgatccagacacagctctggagaatctcacctacatc
gttattcaaagcccacaatatggaaagttgcttttgaaaggtttacccctctctaagcct
catttcacacaactggacatcaacaacatggatctagcttaccatcatctaaatgggcga
gccaagatcgacaggttcacctttcagcctactgatggaactaatgcaggttatttggag
tatggacagctgaagagtgaacctgctgttttcaccatacagatagagataatggacaaa
acaccacccagtattgtaaacaaaggaattccaagtactgtggagaatcttccgggtggc
aaacagggcatctacatcaccttcaaagaactgcaagcctcagatccagacagtcccgac
gacacactcgagttcacaatcacaaggccgccacacttcggttaccttgaaaatgccctc
acaggtgcctatatcaaaggacgctttacccagaaggatctggaccagaaagcagtgcgc
tatgtcatagctgcagatatggaagtgacagcagacagctttgagttccaagtcacagac
cctgcaggaaacaccatgcttcctgaagtgatggaattgaggtggtctcgtgtggagctg
tctgcttcctgttatcgtgtttgtgagaatgcaggaactctagctgtgcaggtggtgcgc
agcgggaacagcaaagatccagcgtacatcggtatacaggtggaagagggaacagccaaa
gttggaaaagacttcactcacagttctgccagtcttatacagtttgatccaggtgtacat
gtcaaaatgtggaacatttacctcaaagatgatggactagaagagaaccatgagaaattt
gatgtggttttgaagactccaaaaaacactgttttgggacagaggaacaaggccacagtt
gagattgtggatcctagaaatggcaaatgtaatccaggtgaccttgttgttgaagaagat
gagaagcaacatcctttccaaagcccaccacacatccaagagcctgaaccacccctactt
gaggaatacactccagacccaaggagcggaatccattgggagaactatccgccaagaggc
gacgtcccatatcgcactcacttcagccatttcagtgtgggagaacctcaggaccaggag
gtctttcacagtcaaggccaaagacagctgaggatcctgggcagaaacagacacagagtg
agccaggcacacatgtcagaaacgaacaacagaaatcaagaaagagtttggagattccat
ggactgatcccagtgagactagaggaaaaggtggcagtacctcgtgtccactctgaactg
gagatcactcccatctggacctggccaggatatgccgctgacgctgaatcagtcgaaact
ccccagcgggactccgcctcttttgtaattgattcaggagtgcaacaacacaagtctcag
aagtctgttagtataggttgtcctaatggctggactcactaccggaggaactgttatgtt
ttggggcctggtgttgctagctggagcagcgcacaacaggcttgcatgctgcttgaaagt
caattgtcaagtatccactcaaagactgatatgaagtggatatggaagtttgctggaaag
cagtcattctggattgggctcacagggggtccaaagcagtggtcctggatagatggaaaa
ccgctgacattctccaaactcaggaaggatcacacaagctctgcctgtgttttagctcag
agccagaagatatggattcctcaaagttgcactgatggatccgaacacagatacgtttgt
tcagcacctgcacaaatcagttaa
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