Ctenopharyngodon idella (grass carp): 127521967
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Entry
127521967 CDS
T08802
Symbol
si:ch211-126j24.1
Name
(RefSeq) phosphofurin acidic cluster sorting protein 2 isoform X1
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127521967 (si:ch211-126j24.1)
Membrane trafficking [BR:
cide04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
127521967 (si:ch211-126j24.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
127521967
NCBI-ProteinID:
XP_051767449
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Position
10:complement(19931623..20009533)
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AA seq
943 aa
AA seq
DB search
MMAAAVERGGVRAAFMNPGVGAPAPAPAAVAPGGSAMAGAVGSGSGAAGSGPIMPVPMNL
FATWEIDRSSPSCVPRLCSLTLKKLIVLKELDRELSSVVIAVKIQGSKRILRSNEYMLPP
SGLMETDLELTFSLQYPHFLKRDANRLQIMLQRRKRYKNRTILGYKTLAVGVINMAEVMQ
HPTDGGQILGLHSNVKEAPVRAAELSVYSLSSQPIDPEDGSGQPETKAKASDRSPDMDNY
SEDDDDSYSSEQEASDDAVQGQDLYDEDDDVQRKPKKSRRKMIRTTSMTRQPNFKQKFVA
LLKRFKVSDEVLDSDPVDQTQEVEDLDLLYDSLEVYNQSDSGPEMEDNESLLSTPKPKLK
PFFEGMSHSSSQTEIGSLHSQKSQPREPPSTSGDLLTVDKNRAVGGRYPDDPTVVDPAAA
ELVEDEAGSGVATCDANMSWDVSAEKLAGTVGKLCKTESQTLMSPSKTDSKLQRRPRSTS
MKDRQNSKAQSDRTSSIESETSPDSRLITQVCVPRKSVYDQLNQILNSDEHLPENIILIN
TTDWQGQYLNEILQEHKQPIVSTVSPADVQAAFNTIVTRIQRFCNCNAQTPPTIKVAVAG
DQSYLSTVLRCFVEQLANKTPDWLSYIRFLVIPVGCHPLAKYISTFDSKFSNIFMDAGWR
DIFGRLEAPTSDNIDVAGRVSQYLAGANLSHQFPISEAMLTYKQKRKRSLYFDFYISPDE
DSCQKFVPFIGLVKVGIVEHSLSTSVDSDDAVMVGSVNMLSSPPAQTGTPYGKDMTSTPP
SSPSVSASLSGAGSPGTGGEVMGLQVDYWTLQGAEKKKEGEKRDVGIKNTLKSNFRSLQV
SRIPNGGEPTPPPGMAMTVVMKEKNKKVIFLSKKLKEKDVDSKSQVIDSISRLICTAKHQ
HTMLKVSIDGVEWHDVKFFQLAAQWPTHVKHFPVGIFGYSKAV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgcggctgtggagagaggaggggtccgagccgccttcatgaacccgggtgtc
ggtgcacccgctccagcacccgctgccgttgcgcccggaggatcagccatggccggagct
gtgggttcgggctcgggtgcggcgggttcgggtcccatcatgcctgtgcccatgaatttg
tttgcaacgtgggagattgaccgctcatctccgagctgtgttccgaggttgtgcagtctg
acactgaagaagttgatcgttctgaaagagttggaccgcgagctcagttctgttgtcatc
gctgtcaagatacaggggtcaaagcgcatcctgaggtcgaatgagtacatgctcccaccc
agcggactgatggaaacagacctggagctcaccttttccctgcagtacccacatttcctg
aagagagatgccaaccggctgcagatcatgcttcaaaggaggaaacgctataaaaacaga
actattctgggctacaagacgctggctgttggtgttattaatatggctgaggtgatgcag
cacccgacagatggaggccagattttaggactccatagtaacgtgaaggaagcacccgtg
cgtgcagcagaactgagtgtttattcactgtccagtcaacctattgacccagaggacggc
agtggtcagccagaaacaaaggccaaagcttcagaccgttctccagatatggataactat
tctgaagatgatgatgatagttactcatcagagcaagaggcgagtgatgacgctgttcaa
ggccaggacctatatgatgaagatgatgatgttcagcggaagcccaaaaaatctaggagg
aaaatgattagaactacgtctatgacccggcaacccaatttcaagcagaagtttgttgct
ctcctgaagagattcaaagtatctgatgaggtattggactcagatccagttgatcaaaca
caggaggttgaagatttggatcttctgtatgacagtttggaggtctataaccagagcgac
agcggcccagagatggaggacaacgagagtcttctcagcactcccaaacccaaactaaag
ccattctttgagggaatgtctcactccagctcacagacggagatcggcagtttacacagt
cagaagagccaaccgagagagccgccctccactagtggtgatctgttaacagtggataag
aacagagcagtgggtggacgatatccagatgaccctacagtggtggaccctgcagccgca
gagctcgtggaggacgaggcgggcagcggcgtggcaacatgtgacgccaacatgagctgg
gacgtgagcgcggagaaattagcaggaacagtgggcaaactctgcaagactgagtcgcag
actctcatgtcgcctagtaaaacagacagcaagctgcagcggcgtccgcggagcacgtcc
atgaaggacagacagaactctaaagctcagagcgaccgcaccagcagcatcgagagcgaa
acctcgccagactccagactcatcacacaggtttgtgtcccaaggaaatcagtgtacgat
cagctcaatcagatcctgaactctgacgaacatctgccagagaacatcatccttattaac
actacagactggcaggggcagtatttgaatgagattcttcaggagcacaagcagcctatt
gtgtccaccgtttcccctgcagatgttcaggcagccttcaacaccatcgtcaccaggatt
caacgattctgcaactgtaatgcacaaacaccaccaaccattaaagtggcagtggcgggt
gatcagagttacctcagcacggtccttcgctgttttgtggagcagcttgccaacaagaca
cccgattggttgagctacattcgtttcttggtcattcctgttggttgtcatccactggcc
aagtacatctcaacatttgacagtaagttcagtaacatcttcatggacgcaggatggcgg
gacattttcgggaggttagaagctcccacttcagataatattgatgtggccgggcgcgtc
tcacagtacctggctggagcgaatctgtcccaccagttccctatttctgaagcaatgctc
acctataaacagaaaaggaagagaagtttgtattttgatttttacatcagccctgacgaa
gattcctgccagaagtttgtcccattcattgggttggttaaagtaggaattgtggagcac
agcttatccacatcagtggactctgatgatgcagtgatggtgggcagtgtgaacatgctc
tcctcacctccggcgcagacgggaacgccgtacgggaaagacatgacctccacccctccc
tcatccccctctgtttctgccagtctctctggagcaggttctccaggcaccggtggtgag
gtgatgggtcttcaggtggactactggacgttacaaggtgcagagaagaagaaagagggc
gagaaaagagacgtggggattaagaacacattgaagagtaacttccgctctctgcaggtt
tcccgaatccccaacggaggagagccaacaccccctcccggcatggccatgaccgttgtc
atgaaggagaaaaacaagaaagtgattttcctgagcaagaagctgaaagagaaggatgtg
gactctaagagtcaggtgatagacagcatcagcagactcatctgcacagctaaacaccag
cacaccatgctgaaggtgtctattgatggcgtagagtggcacgacgtgaagtttttccag
ctggccgcgcagtggccgactcacgtgaaacacttccctgtaggaatctttggctacagc
aaggctgtgtga
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