Ctenopharyngodon idella (grass carp): 127522013
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Entry
127522013 CDS
T08802
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127522013
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
127522013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
NACHT
EIF3I
Beta-prop_TEP1_2nd
WHD_NWD1
Beta-prop_EML
nSTAND1
AAA_16
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
NPHP3_N
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_Gbeta
AAA_22
WDR90_beta-prop_4th
ATPase_2
AAA
Beta-prop_RIG_2nd
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
Beta-prop_WDR75_1st
Bac_DnaA
RuvB_N
nSTAND6
Motif
Other DBs
NCBI-GeneID:
127522013
NCBI-ProteinID:
XP_051767479
LinkDB
All DBs
Position
11:complement(10649511..10666313)
Genome browser
AA seq
1407 aa
AA seq
DB search
MVINVLYICFIVLEYEMEQGFLKTQRDASAVLFIRELPRLSKRDCKKNFAKFLLDVTADG
LLDTEARELLADLKQRICNTGLLQPLCMELSKGAMDPSRKEHKEYLGKLCEQVTSQIKEL
ISRNALQTSGGCSTVDPRWSWLKQELFHHAMLSEEKCSVFKGRDSILGKICITIWESTNA
CHEPLLVHGPSGVGKTALLCKLAQEMRGVVDHRGVVVLRLLGTSPLSSDVNSVLRGLCLQ
VCGASGLKFPHPHIANTHEELVRFFHSMLEDVSKQGDTLLLILDSVDQLLEADKPHKLDW
IPKAIPPNVHIVLSTSDDCVEKCKSLVSAEQNIFRVELLTDDQGKDVIDAYMSAAGRKLT
SEQLDTILHSFQQSGSPLHLKLILDIAKQWSSWTSMSSVNLGISAQEVMTQFVQSLEENH
GKKLVSHALSFILLSRYGLSEAELQDVLSLDNDVLAEIYKYWLPPSHTLLRFPRLHWSRL
RHDLRAHLVERWEGGVILLGFAHRQFKELVRKRYLSRNVKADMHAILAEYFSGQWSQGQL
RPILLPSLTTLLNADRKVPPQPLWFTGEIANLRKLHELPYHLAHAGKWEELHKSVLGSLD
WLCCKTLQCGVSCVIQDLSLCTDLTDCPEIQMLKETFLLLKPSLDFSDGNVDPSLLVTEI
FARLQGLADLYPSMIGQLCSQCVDWFSSCTDPVLVPKCSFFQAPGGPLKSTLTGFTKGVK
AVVLCSKRELLVAGSEDGLIIVWSLSHLQTLHTLSGHTAGVLSLKMVDKTNNCLSTALDG
TLRKWCLLSGQQLFCITDAVSVQTHTPAHVHLIEEKKIIITNPSSLVKAWHLDTAEPLYE
VTAGVCSVLGVVGDAIACICSEGVLCFYDTSTGMQNSQTPLPCSAGHHNITCSLTLTKYA
KILIAFGEGRLHSVWSHGIESVVDLPTPALFLRTSEDEKLLFAGCDRTLCVFLVTLTSMQ
KVLNLHHDASVLCAVSSSEGSEIITSAQDRIIRVWSVTTGALLDWIGVMDSAVSTLAVHQ
RTIISASVIANQLKVWQLDYNTKHRSKSFIPAYCPLVVLSKDGDTVFYVKEGNKTEVFTW
SCSEGLQTDSMDVSSEVCCMELAQQKHLLFCGLRTGTILIYPLDFALETLCLPPPESLPT
VRSMAISPREDRMAVAYEDAVCLFEITARDSFPCVDGPFERYSLCLLHSPISAMALLSDC
RLLYGTFGGEVVIYDFKSATAAELDHHGAAITCITMSNWDAQALIGSQDCVQKLWNLSPV
LLNHTMEYKGFYFEGVLCAVFSINDKYVFTGSLDKTIKVWDVSSGCLLYIQYVYSPVIKM
MPHKDGFVAMSQHGSFIKEGFQCPDTLKPGYNPLRNFQAHYRVTSREKSLNAPHTMINEL
PDYNPAQFNFIGIGLMKTKSSNTCVLL
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggttatcaatgttctttacatatgtttcatagtgttagagtatgaaatggagcaagga
tttctcaagactcaaagggatgcgtcagctgtgctgtttattcgtgaactgcctcgactt
agtaaaagagactgcaagaaaaacttcgcaaagtttcttctggacgtcacagctgatggc
ttgcttgacacagaagcccgggagctcttggccgacctgaagcaacgcatctgcaacaca
ggtcttctccaacctctctgcatggagctcagcaaaggagctatggacccgagccgcaaa
gaacacaaggaatacctgggaaaactgtgtgagcaggtaacatctcaaataaaggaactg
atcagtaggaacgctctgcaaacttcaggaggttgtagcacagtagatccaagatggtct
tggttgaaacaggagctcttccatcatgccatgctgagcgaggagaagtgttctgtgttt
aaagggagggacagcattctgggaaagatctgcatcaccatatgggagtccactaatgct
tgccatgaacctcttctggttcatggaccttcaggggttggtaaaacagctctgctttgc
aaactggcacaggaaatgcgaggcgttgttgatcatcggggagttgtggtgctgaggctg
ctgggaacatctccactcagttcggatgttaactctgttctcagaggtctatgtcttcaa
gtgtgtggagcttcagggttgaagttcccccacccgcatattgccaacacgcatgaagag
ctagtccggtttttccattccatgctggaagacgtgtcaaaacaaggagacacgctcctg
ctcattctagactcagtggaccagctgttagaggcagacaagccccataaactagactgg
ataccaaaagcaatcccacctaatgtacatattgtgctctccacgtctgatgactgtgtt
gagaaatgtaaatctttggtttcagcagaacaaaacatctttagagtggaacttctcaca
gacgatcaagggaaagatgtcattgatgcctacatgagcgcagctggacgcaagctgact
tcagaacagcttgacaccatcttacacagcttccagcaaagcggaagccctttgcatctg
aaactcatactagacattgccaagcagtggtcttcctggacctccatgtctagtgttaac
ctgggcatctctgcacaagaagtgatgacacagtttgtgcaatcacttgaggaaaatcat
gggaagaagctagttagtcatgctttgagcttcatattgttatcaagatatggactatca
gaggcagagttacaggatgtcttgtcattagataatgatgttctggccgagatctataag
tactggcttcctccaagccacacactcctgcgattcccacgccttcattggtcacgtctc
cggcatgacctgagagctcatctggtggagagatgggaggggggtgttattctactgggt
tttgctcacaggcagttcaaagagctggtaaggaagagatatttgtcacgcaatgtgaaa
gctgacatgcacgccatcctcgccgagtatttctcaggacagtggagtcaagggcagctc
aggcctattcttctgccctcgctaaccacactgctaaatgctgacagaaaggtaccaccc
cagcccttgtggttcactggagaaattgccaatttacggaagcttcatgaactgccctat
cacctcgctcatgcaggcaaatgggaggagctacacaaatcagtgcttggcagtctggat
tggttgtgttgtaaaactctgcagtgtggcgtgagctgtgttattcaggacctgtcgctt
tgcactgacctcaccgactgtcctgagatacaaatgctgaaagagacatttctgctgctt
aagccctcattagattttagcgatggcaatgtggatccctcacttttggtcacggagatc
tttgccaggctgcagggccttgctgatctctacccctctatgattggtcagctatgttct
cagtgcgtggactggtttagttcctgtactgacccagtgcttgtgcccaaatgcagcttc
tttcaggcccctgggggcccactgaagagcaccctcacggggttcactaaaggggtaaag
gctgtcgtgctatgctcaaagagggagctgctggtagcaggttcagaggatgggctgatc
atagtctggagtctaagccatctacagactcttcatactctttctggacacacagcgggg
gtgctgtccctgaagatggtggataaaaccaataactgtctgtctactgcactcgatggc
acactgagaaaatggtgtctgttaagtggacaacagcttttctgcatcactgatgcagtg
tctgtccaaacacacacccctgcacatgtccatttgattgaagaaaagaagattatcata
accaatccaagcagcctagttaaagcttggcacttggacactgctgagcctctgtatgag
gtgacagcaggggtttgttctgttcttggtgtagtgggagatgccatagcatgcatatgc
agtgagggggtgctctgtttttatgacacatccactggcatgcagaattcccagaccccc
ctaccctgctctgctggacaccataatatcacctgctctctgacactcaccaaatacgcc
aagatactcattgcttttggggaaggccgtctacattcggtatggagccatggaattgag
tctgtcgttgatcttcctactccagctttgttcctcagaacatctgaggatgaaaaactg
ctgtttgcaggatgtgacagaacattgtgcgtgttccttgtgacactgacttcaatgcag
aaggttctgaatcttcaccatgatgcgtctgtcctatgtgccgtctcaagcagtgaaggt
agcgaaatcatcacaagtgcccaggatcggattatacgggtgtggagtgtaaccacagga
gccctgctagactggatcggtgtgatggattctgctgtgtccactttggctgtacatcag
cgcactattatatctgcctctgttattgccaaccagcttaaagtatggcagctggactac
aacaccaaacacaggagcaagagtttcatcccagcatactgcccgctagtggtcctgtcg
aaagacggtgatactgtattctatgtcaaagagggaaataaaacagaagttttcacctgg
agctgttcggaaggtctacagacagacagtatggacgtgtcctcagaagtgtgctgcatg
gaattagcccagcagaaacatctactcttttgtggactgcggactggtaccatccttatt
tacccactggactttgccctagaaaccctgtgcctgccacctccagaaagcctaccgacg
gtgcgcagcatggctatcagcccacgggaggatagaatggccgtggcatatgaggatgcg
gtctgtctgtttgagattacagcgagggacagtttcccctgtgtggacggcccatttgag
aggtactccttgtgcctactgcattccccaatctccgccatggctctgttgtccgactgc
aggctgctctatgggacctttggtggtgaagttgtaatctatgactttaagagcgccaca
gcagctgagctggatcaccacggtgcagccataacctgcatcaccatgagcaactgggac
gcacaagctttgattggctctcaagactgtgtccagaagttgtggaatctgagtcctgtc
ttgttgaatcacaccatggagtacaagggtttctattttgaaggtgtcctttgtgctgtc
ttctcgataaatgataaatatgtcttcactggatccctggacaaaaccatcaaagtctgg
gatgtctctagtggttgtttgctatacatccagtacgtctactctccagtcataaagatg
atgccacacaaggacgggtttgtagccatgtcccagcatggatctttcatcaaggaaggc
ttccagtgtccagacactctcaaacctggatacaaccccctccgtaacttccaagcacat
taccgagtcacctctcgggagaaaagcctgaatgctccacacaccatgatcaacgagctg
ccagattataaccctgctcagtttaatttcattggcatcggtttgatgaaaaccaaatca
tccaacacatgtgttctcctgtaa
DBGET
integrated database retrieval system
