Ctenopharyngodon idella (grass carp): 127522042
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Entry
127522042 CDS
T08802
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127522042
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
127522042
NCBI-ProteinID:
XP_051767547
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Position
11:complement(26645662..26672149)
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AA seq
814 aa
AA seq
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MSTVFCWVLVVLFSVALCMDFEERPSSSRSEQTMFLKSHKSRNLLSLRDLQQLDHVKMKR
SEESVQNQCESLHGYDSTLKNNTHTYNFNDLSGSVSLAWVGDGTGVLLVLTTFQVPLFIM
RFGQSRLYRSEDYGKTFQDITDLINNTFIQTEFGIAISPENSGKVILTGDLTDGRVTKIF
RSVDFGKSFVTSELPFHPLMQITYNPRDSNILMVYSINYDLWLSEDFGASWRKIHETVCL
VKWGIDDTIFLTTNPNGSCSDRGKLELKKSLDYGRTFKTIGSRIYSFGLGGRFVFASIMT
DSGSTRMIHVSVDQGETWDMAQLPTVGHEQFYSILAANDDMVFMHVDEPGDSGVGTIYVS
DDRGTVFSKSLERHLYTTTGGDTDFTNITSLRGVYMTSVLAVDGSVQTVITFNQGGGWRP
LQKPWNGVCDSTTEHPDKCSLHIHASYSISMKLNVPVQPLSEPNAVGLILAHGSVGGAVS
VLSPDVYVSDDGGYTWFQALKGPHHYAILDSGGLLVAVEHNPSHPISQIKFSTDEGQCWH
VYNFTDEPIYFTGLASEPGAHSMNVSLWGYRETVLNQYWVSVTVDFRQLLSRDCQDNDYI
VWLAHSSNNSDPTDGCILGYKERFLRLRKDSVCWNGRNYMVTMEPTTCACSLTDFQCDFG
FYHAENSSVCVEQPDLIGHSLEICLHGRKEQLQTSGYRKIPGDHCEGGIIPERKEIDLSK
KCVSNLLRSELPTEEHSFNSAPIIAVVIAVLLISAVAGVIFIKKYVCGGRFLVHRYSVLQ
QHAEANGIEGVDDLDTLEVGKTQYHDDSDEDLLE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtattctgctgggttttggttgtgttattctcagtggctctttgtatggac
tttgaagagagacccagcagctctaggagtgagcaaaccatgtttctaaagagtcacaaa
tcacgaaatctgctcagtttgagagatttacagcagctggatcatgtcaagatgaaaagg
agtgaagaatccgtacaaaatcaatgtgaatcactgcacggctatgattctacgttaaaa
aacaacactcatacgtacaacttcaatgacctaagtggctcggtgtctctggcctgggtt
ggagacggcacaggggtactgctggtgctgaccacattccaggttcctctttttatcatg
cggtttggtcagtccagactgtacagaagtgaagactatggaaagacattccaggacatc
accgacctcattaacaacaccttcatacagacagagtttggcatcgcaatcagtcctgaa
aactctgggaaggttatcctcacaggtgatctaaccgatgggagagtcaccaaaattttc
cgttcagttgatttcggcaaaagctttgtgacctctgagcttcccttccatccattaatg
cagatcacatacaatcccagagacagcaacatactcatggtctacagcatcaattatgac
ttatggctgtctgaggacttcggcgccagttggaggaagatccatgagactgtttgtctt
gtgaaatggggaattgatgacaccattttcttaactacaaatcccaatggatcctgcagt
gaccggggaaagttggaattgaaaaaatcattagactatggcagaacatttaaaactatt
ggaagcaggatttattccttcggcttgggtggacgctttgtttttgcctcaatcatgacc
gactcgggttccacacgcatgattcatgtctcagtagatcagggtgagacatgggacatg
gctcagcttcccaccgttggccatgaacagttctactccattctagccgcaaatgacgat
atggtcttcatgcacgtagatgaacctggagactcaggtgttggtaccatatatgtgtct
gatgaccgaggtacagtgttttccaagtctctggaacgccatttgtacaccactacgggc
ggagacactgacttcaccaacatcacctctctgaggggcgtatatatgaccagtgtgctc
gccgtggatggctctgtgcagacagtgatcacatttaatcaaggtggagggtggcgacca
ctgcagaagccctggaatggagtgtgtgactctacaactgagcacccagacaaatgtagt
ctgcatattcacgcgtcctacagcatctctatgaaactgaacgtgcccgtgcagcccctc
tcagagccaaatgcagtgggacttatcctggcacatgggagtgtgggaggtgcagtttct
gtgctttctccagacgtgtacgtgtcagatgacggaggttacacatggtttcaggcatta
aaaggcccccatcactacgccatactggattcaggaggactgcttgtagcggtggagcac
aacccctcacaccccatatcacagatcaaattttcgactgatgaaggtcagtgttggcat
gtatataattttaccgatgagccaatatacttcactggcctggcatcagaacctggtgcc
cactccatgaacgtcagcctgtggggctacagagaaaccgtcctgaatcagtactgggtt
tctgtcactgtcgacttcaggcagttgctctctagagactgccaggataatgactacata
gtgtggctcgctcactcaagcaataatagtgaccccactgacggatgcatactgggatac
aaggaaaggtttttacggttgcgaaaggactcagtctgttggaacggccggaattacatg
gtgaccatggagcccacaacatgtgcctgctccctaactgactttcagtgtgacttcggg
ttctaccatgcggaaaacagctctgtgtgtgtggagcagcctgaccttattggccattca
ctggagatctgcctgcacggacgcaaagagcagcttcagaccagcggttatcggaaaatt
cccggggatcactgtgaaggaggaataattccagagcgaaaagagatcgatctgagtaag
aaatgcgtcagtaacttgctgaggtcagagctaccgacagaggagcattcattcaattca
gctcctataatcgctgtggtcatcgctgttctgttgatcagtgccgttgctggggttatt
ttcataaaaaaatatgtctgtggaggaaggttcctggttcacaggtactccgtattacag
cagcacgctgaagctaatggcatcgagggtgtggatgacctggacacactggaggttggc
aagacgcaataccatgatgattcagatgaggaccttcttgagtga
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