Ctenopharyngodon idella (grass carp): 127522054
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Entry
127522054 CDS
T08802
Name
(RefSeq) macrophage colony-stimulating factor 1a isoform X1
KO
K05453
macrophage colony-stimulating factor 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127522054
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127522054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cide04052
]
127522054
Cytokines and neuropeptides [BR:
cide04052
]
Cytokines
CSF and other factors
127522054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
NP1-WLL
EC042_2821
Motif
Other DBs
NCBI-GeneID:
127522054
NCBI-ProteinID:
XP_051767567
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All DBs
Position
11:9339275..9393286
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AA seq
545 aa
AA seq
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MLMNNALLTTDPCCTVRHQCFFLILCFHLVCAGVPGPCKHSVTQDHLLNLKRLIKNQLQN
GCSITYTFTERQNLSVVCYVKAAFPHILELLNTQFSYAKDSDNYRYTNSLKNLIYNIYSQ
RCIPPINEEIEDSPTKFIRIHMTLPRAALEKAEEVIRMYMGLMTQSDKPVDWNCEEEYTE
DYPESTTEPLSQTAGASECPCICPTLSSGSSRTSTSTSHWNIYLKSTPSPQRSSFSPVVT
LQGGNERTKQFKSAVPVAKHQTLAPGTPTTWRSMQGHLPNFLFGSNPALPEETSNSVMQN
MPSSDLFPSFTNSKDVFPSRTDSTVQSTASGPYQKNTRDNTQDSVERSTPLLLAKRSLDS
KSQKGPSSSYVKLSQNRVTATSEPTYKDIKSTEIKGKSFQTSKHIVPVTTTVMSSLKAAA
HSSGLSILVEQPGHLNSPPENFQTHTQSPVRMPRNFIGTIHEAKLSRDSKSQEDRKGMKD
QTHPDRETQRNSATEESSSSSIISFDTVLIITLGCGGLLLITVLFYRQQKVSDPQWIFAL
LKRPG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgaacaacgcactgctcactactgacccctgttgcacagtaaggcatcagtgc
ttcttccttatcctgtgctttcatttggtctgtgctggtgtgccaggtccatgtaagcac
tctgtcacacaggaccatctcctgaatttaaaacgtctgattaagaaccagctgcaaaat
ggttgttcaataacctacactttcactgaacgccagaacctgagtgttgtgtgttatgtt
aaagcagcatttcctcacattctggagctactcaacacccaattcagctatgctaaggac
tccgacaattatcgttacactaattcactgaagaacttgatctacaacatttactcccag
agatgcatccctccaatcaatgaggagattgaggatagcccaacgaagttcataagaatc
cacatgactttgcccagggcagctttggagaaagctgaggaagtgattcgcatgtatatg
ggtctaatgactcagagcgacaagcctgtggactggaactgtgaggaggagtacacagag
gattacccagaatccaccactgaacctctcagccaaacagcaggtgcctctgaatgcccc
tgcatttgtccaacactgagcagtggatcatctaggacatctacatccacaagccattgg
aatatttatttgaaatctactccatccccacaaagatcatctttttcacctgtggtaacc
ttgcagggtggtaatgagagaactaaacaattcaagtctgctgtcccagtagccaaacac
caaacactagctccagggacacctaccacatggagatcaatgcaaggacatttacccaac
ttcctctttggtagcaatccagctttacctgaagaaacttcaaattcagtgatgcaaaat
atgccatcatcggatcttttcccttcatttacaaattctaaggatgtatttccgagcaga
actgactcaactgttcagtcaactgcatctggcccctatcaaaaaaacacaagagataac
acacaggacagtgtggagaggagcacgccgcttttacttgccaagaggtctttagattct
aaaagccagaaaggaccatccagttcctatgtgaaattatcccagaacagggttactgca
acatctgagccaacatataaagatataaagagtacagagataaaaggcaagtctttccag
acaagtaaacacattgtaccagtcacaaccacagttatgtcttctttgaaagcagctgca
cattcatcaggtctgagcatccttgttgaacagccaggtcatctaaacagccctcctgaa
aatttccaaacacacacccaaagtccggtgaggatgccaaggaatttcattggaaccatc
catgaggcaaagctcagcagggacagcaaatcccaggaggacaggaaggggatgaaagac
cagactcatccagacagagaaacacagaggaactctgccacagaagaatcatccagcagt
tcaatcatctcttttgacactgtgctcataattactctagggtgcggtggacttctgctc
ataactgtcctattttacagacagcaaaaagtaagtgacccacagtggatttttgccctg
ctgaaaagacccggttag
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