Ctenopharyngodon idella (grass carp): 127522055
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Entry
127522055 CDS
T08802
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cide00535
]
127522055
Proteoglycans [BR:
cide00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
127522055
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
LRRNT
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
127522055
NCBI-ProteinID:
XP_051767574
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All DBs
Position
11
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AA seq
326 aa
AA seq
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MAVNRQISKMALYLVWTLLGFSLSAPPTDLDPEAFGPTFDDLNPWDPNPYGVTYDYDDLD
EEIGTLAPPPAVTQPPAVVPPEDYVEEVTLPPRPTKSPVLSTLDFRGPGLFGPDTGLGMP
SCLLCVCISGSVYCDDSELIQIPPLPKETTHFYARFNKITEVKATDFINLNQLKRIDLSG
NQIGKVNEDAFRSLLQLQDLILADNNIQALPELPASLKHIDVRNNKLRSTGMHSEAFKEM
KELQFLYLSNNKLDYIPVPLPDSLRVLHLQNNNIQSISQDTFCNIHDKNYIRKALEDIRL
DGNPVDINLYPQAYICLPRLPVGTPV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaacaggcaaatatcaaagatggcgctgtatctcgtttggaccctgttgggc
ttcagtctcagtgcccctccaactgatctggaccctgaagcatttggcccgacctttgat
gatttaaacccatgggatccgaacccatacggagtgacctatgattatgatgacctggat
gaggagattgggacactggctcctcctccagcagtcactcagccacctgctgtagttcct
cctgaggactatgtggaggaagtgacactgccgccccgtccaacaaagtcacctgtccta
tccactctagacttccgtggtccgggtctgtttgggcctgacacaggcttagggatgccc
tcctgcctgctgtgtgtgtgtatcagcggcagtgtttactgtgatgactcagaactgatt
cagattccccctcttcccaaagaaaccacacacttctacgctcgcttcaacaagatcact
gaggtcaaagccacagacttcatcaatctcaatcaactgaaacggatcgacctgagtgga
aaccagataggtaaagtgaacgaagatgcttttcgttcactgcttcagcttcaggatctc
attttggccgacaacaacatccaggcactcccagaactcccagcttccctcaagcacatc
gatgttcgcaataacaagctaaggagtacaggcatgcactcagaggcctttaaggagatg
aaagagcttcagtttctttacctgtcaaacaacaagttagactacattcccgtaccccta
ccggacagcctacgagtgctccacctgcagaataacaatatacagagcataagccaagat
actttctgcaacatacatgacaaaaactacatacggaaagcccttgaggacatcaggctt
gatggcaacccagtggacatcaatctctaccctcaggcttatatctgcttaccacgacta
cctgtaggcactccagtctag
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