Ctenopharyngodon idella (grass carp): 127522072
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Entry
127522072 CDS
T08802
Name
(RefSeq) ras-related protein Rab-7a isoform X1
KO
K07897
Ras-related protein Rab-7A
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
cide04140
Autophagy - animal
cide04144
Endocytosis
cide04145
Phagosome
cide04148
Efferocytosis
cide05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127522072
04145 Phagosome
127522072
04140 Autophagy - animal
127522072
04137 Mitophagy - animal
127522072
04148 Efferocytosis
127522072
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127522072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127522072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127522072
04031 GTP-binding proteins [BR:
cide04031
]
127522072
Membrane trafficking [BR:
cide04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
127522072
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127522072
Exosomal proteins of other body fluids (saliva and urine)
127522072
Exosomal proteins of colorectal cancer cells
127522072
Exosomal proteins of bladder cancer cells
127522072
GTP-binding proteins [BR:
cide04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
127522072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
cobW
nSTAND3
PduV-EutP
AAA_7
Septin
AAA_16
G-alpha
NTPase_1
AAA_22
AAA_24
AAA_5
ATPase_2
NB-ARC
DAP3
MCM
NACHT
AAA_14
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
127522072
NCBI-ProteinID:
XP_051767614
LinkDB
All DBs
Position
11:complement(5624202..5638772)
Genome browser
AA seq
225 aa
AA seq
DB search
MEELFSPLVDPTEACCDTMTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIG
ADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW
RDEFLIQASPRDPENFPFVVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINV
EQAFQTIARNALKQETEVELYNEFPEPIKLDRNDRAKPSAETCSC
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcttcagtccgcttgtggatcctactgaagcgtgctgtgacactatgaca
tcaaggaagaaagttcttctgaaggtgatcatccttggagactccggggttgggaagaca
tctctgatgaaccagtatgtgaataagaagttcagtaatcagtataaagctactatagga
gcagatttcctgacaaaagaagtgatggttgatgaccgacttgtcacaatgcagatatgg
gatacagcaggtcaagagcggttccagtctttgggtgtggctttctaccgcggcgctgac
tgctgtgtgttggtgtttgacgtcactgcccccaacaccttcaagacactggacagctgg
agggacgagtttctgatccaggccagcccacgcgacccagagaacttccccttcgtagtg
ctgggcaacaaaattgatctggagaataggcaggtaacaaccaagcgggcacaagcttgg
tgtcagagtaagaacaacatcccatactttgagaccagtgcaaaggaggccatcaatgta
gagcaggctttccagaccatcgcacgcaatgcactcaaacaggaaaccgaggttgagttg
tacaacgagtttcctgagccaattaaactggaccggaacgatagagccaagccatcagca
gagacttgtagctgctga
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