KEGG   Ctenopharyngodon idella (grass carp): 127522072
Entry
127522072         CDS       T08802                                 
Name
(RefSeq) ras-related protein Rab-7a isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04137  Mitophagy - animal
cide04140  Autophagy - animal
cide04144  Endocytosis
cide04145  Phagosome
cide04148  Efferocytosis
cide05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cide00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127522072
   04145 Phagosome
    127522072
   04140 Autophagy - animal
    127522072
   04137 Mitophagy - animal
    127522072
   04148 Efferocytosis
    127522072
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127522072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cide04131]
    127522072
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127522072
   04031 GTP-binding proteins [BR:cide04031]
    127522072
Membrane trafficking [BR:cide04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    127522072
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127522072
  Exosomal proteins of other body fluids (saliva and urine)
   127522072
  Exosomal proteins of colorectal cancer cells
   127522072
  Exosomal proteins of bladder cancer cells
   127522072
GTP-binding proteins [BR:cide04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    127522072
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 AAA_7 Septin G-alpha AAA_16 AAA_24 NTPase_1 AAA_22 AAA_5 ATPase_2 NB-ARC DAP3 MCM NACHT AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 127522072
NCBI-ProteinID: XP_051767614
LinkDB
Position
11:complement(5624202..5638772)
AA seq 225 aa
MEELFSPLVDPTEACCDTMTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIG
ADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW
RDEFLIQASPRDPENFPFVVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINV
EQAFQTIARNALKQETEVELYNEFPEPIKLDRNDRAKPSAETCSC
NT seq 678 nt   +upstreamnt  +downstreamnt
atggaggagctcttcagtccgcttgtggatcctactgaagcgtgctgtgacactatgaca
tcaaggaagaaagttcttctgaaggtgatcatccttggagactccggggttgggaagaca
tctctgatgaaccagtatgtgaataagaagttcagtaatcagtataaagctactatagga
gcagatttcctgacaaaagaagtgatggttgatgaccgacttgtcacaatgcagatatgg
gatacagcaggtcaagagcggttccagtctttgggtgtggctttctaccgcggcgctgac
tgctgtgtgttggtgtttgacgtcactgcccccaacaccttcaagacactggacagctgg
agggacgagtttctgatccaggccagcccacgcgacccagagaacttccccttcgtagtg
ctgggcaacaaaattgatctggagaataggcaggtaacaaccaagcgggcacaagcttgg
tgtcagagtaagaacaacatcccatactttgagaccagtgcaaaggaggccatcaatgta
gagcaggctttccagaccatcgcacgcaatgcactcaaacaggaaaccgaggttgagttg
tacaacgagtttcctgagccaattaaactggaccggaacgatagagccaagccatcagca
gagacttgtagctgctga

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