Ctenopharyngodon idella (grass carp): 127522117
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Entry
127522117 CDS
T08802
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127522117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127522117
03036 Chromosome and associated proteins [BR:
cide03036
]
127522117
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127522117
Coactivators
SAGA/TFTC/STAGA complex
127522117
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127522117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
ACL4_C
Chorion_E1
Motif
Other DBs
NCBI-GeneID:
127522117
NCBI-ProteinID:
XP_051767686
LinkDB
All DBs
Position
11:complement(7974607..7995344)
Genome browser
AA seq
820 aa
AA seq
DB search
MVTTLIGTSTVQTLNGGNAMDSHTESGTSVSSGPSSSSDEASTSVPVVNNGPGVAKGHGN
VTVTPNPNTVIQSSYGNPPASAASSAGPSVTVVRPSMQTAGTGLTINGSNNNTTVSATVA
NVATPGITTTSTTTTTCTTTTTPLLMNQTPASVSASKSESPKTIIQSAGGMTLGPGVAKG
AVLQGVARTAAPATVAAASSPAIRAIAPQVLAPRLPQSNPGQNIQNIQLPPGMVLVRSDS
GQLLMIPQQMLAQMQAQSQAARPAAPTSTTPGQITSAQAPGTPLMARQVTPTTIIKQGSP
TPSSTATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTAATGTTVSSATETMENVKKCRNF
LSTLIKLATSGKQSSETVANVKELVKNLLEGAIEAEEFTSRLYKELNSSPQPYLVPFLKR
SLPALRQLTPDSTAFIQQSQALQAPTVVLTSPNTAGATGTAPRTLVQPALSNSSQTASLV
LQPPQQGAIVKPPQVTLTTTPMVTLRGQPHSHIVVGQPQVQLKQIQTVAVKQGVVSSTKL
APGSVSVAIAQKNKAKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVTR
SCKDEAFLSASMLQHKILEIGQRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQKN
MTYKEDSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLK
QKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKLDSPSFGTDAEGSGLCTSASGGLNAG
ASRQFTRQRITRVNLRDLLFCLENERSTSHSQLLYRALLK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgatcgggacgtccacagtgcaaactttgaacggaggcaatgcaatg
gattcgcacactgaaagcggcacttcagtgtccagtggtccatcatcatcatcggacgag
gcttcaacttctgtaccagttgttaataacgggcccggggtggcgaaaggacacggaaac
gtcactgtcaccccaaacccaaatacagtgatacagtcttcttacgggaatcctccagca
tccgcagcatccagtgcaggaccctcagtgacagttgtcaggccatctatgcaaactgct
ggaacaggtttaactattaacgggagtaataataataccaccgtttcggcgactgtagcc
aatgtagcgaccccgggaataactactacttctactactactacaacttgtactactaca
acgacacctcttttaatgaaccagactcctgcctctgtctccgcgagcaagtccgagtcc
cctaaaactatcatacagtccgccggcggcatgactctcggtcctggagtggccaagggg
gctgttttgcagggggttgcgagaacagcagctccggcaactgttgcagcagcatccagc
cctgccatcagggccattgcgccacaggtgttagcgccccgactccctcagagcaaccct
ggccagaacatccagaacattcaactacctccaggtatggtgttggtgcgtagtgacagt
ggtcagttgctgatgatccctcagcagatgttggcacagatgcaggcccagtctcaggcc
gcccgccctgctgcccccaccagcaccacccctgggcagatcacctctgcacaggcacct
ggaactcctctaatggcccgacaggtgacccctaccaccatcataaagcagggctctcct
acacccagcagcacggccactaccacactccagagaccacctgtacagcaggcttcctct
gtgggtgcagtgttgtcagtgcaggcaggaactgcccagaggactgtgactgctgccacg
gggaccaccgtctcctcggcaacggagacaatggagaatgtaaagaaatgtaggaacttc
ttgtccacgctgataaagctggccactagcggtaagcagtcatcagagactgtcgccaac
gttaaagagctggtcaagaacctgctggaaggggcgattgaagcagaggagttcaccagc
aggctctacaaagagctcaactcgtctcctcagccttatctagtgcctttcctgaagagg
agtcttccagctctgcgacagctcactcctgactccacggccttcatccagcagagccag
gccctccaggcacctactgtggtgctgaccagccccaacactgctggagccaccggcaca
gcccctcgcacgctcgtccagcctgcccttagcaactccagccagaccgcctctctggtg
ttgcagcctccacagcagggggcaatagtgaagccccctcaggttaccctgacaaccact
cctatggtaacgctcaggggtcagccccacagccacatagtggtgggtcagcctcaggtg
cagctcaaacagatccagacagtggcagtaaagcagggtgtggtgagtagcactaaactg
gctcccggctccgtgtctgtagcgatagctcagaagaataaagctaaggatggtgctgga
ggaactttcagggatgatgacgacattaatgacgtggcctcaatggcaggtgttaatctt
tcggaggagagtgcccgtatcctggccaccaactctgagctggttggcgcggtcacacgg
tcttgtaaagatgaagctttcctctccgccagtatgctacagcacaagatactagagata
ggccaaaggtttggagtgacggagctgggtcccgaggttgtgaacatcgtctctcacgcc
actcaacagagactgcaaaaccttctagagaaggtctcgctgatcgcccagcaaaagaac
atgacttacaaggaggacagtcggtacgagcaggtggaggatgttcgctctcagttgaag
ttctttgagcaacttgaccagttggagaaacaaaagaaagaggaacaggagagagaaatt
ttaatgaaggcagctaagtcacgctcacgacaagaggaccccgagcagctgcggctgaaa
cagaaggccaaagagatgcagcagcaggaattggctcagattcgacagagagacgccaac
ttgacggcgttggcggctatcggacccagaaagaaaagaaaactggattcgccttcattt
gggactgacgcagagggctcaggtttgtgcacaagtgcatccgggggcttaaatgcagga
gcgtcgaggcagttcactcgccagcgcatcacgcgtgtaaacctcagggatctgctcttc
tgtctagagaacgagagaagcaccagccactcacaactgctctaccgagcccttctcaaa
tag
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integrated database retrieval system
