KEGG   Ctenopharyngodon idella (grass carp): 127522158
Entry
127522158         CDS       T08802                                 
Name
(RefSeq) snail family zinc finger 1a
  KO
K05707  snail 1
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:cide00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    127522158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cide03000]
    127522158
Transcription factors [BR:cide03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    127522158
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-met zf-C2H2_6 C2CH-3rd_BIRD-IDD zf-C2HE zf-C2H2_7th_ZNF462 zf-C2HC_2 Teflon_C zf-Di19 Zf-C2H2_ZNF451_1st Zn_ribbon_8 zf-C2H2_15 Zf-C2H2_ZNF451_6th Cpxcr1_C zf-ZTF-17_C2H2_2 Zf-C2H2_ZNF451_C zf-BED MTNAP1_ZnF
Other DBs
NCBI-GeneID: 127522158
NCBI-ProteinID: XP_051767749
LinkDB
Position
11
AA seq 256 aa
MPRSFLVKKYFTSKRPNYSELECQNDTLPDRYPLAELPAVSNDFPVTCLTTGLVWDVSLV
PSLHDPTSPSTLSTSQGPLDLSSPSSISCSSSGEEDEGRTSDPPSPDSSDTYHPQQTSRP
RRNNKNRPGQREDKSEATVPVTRPAFFCKHCPKEYNSLGALKMHIRSHTLPCVCPTCGKA
FSRPWLLRGHIRTHTGERPFSCTHCNRAFADRSNLRAHLQTHADVKKYQCSTCSRTFSRM
SLLQKHSAAGCCPSTA
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcctcggtctttcctggtaaaaaagtatttcaccagcaagaggccaaactacagcgag
ctggaatgccagaacgatactttgccagacagatacccactagcagaacttccagcagtc
agcaatgacttcccagtgacttgcttgaccactggactggtttgggatgtcagcttggta
ccttctctgcacgatcccacatccccatccaccctttccactagccagggcccactggac
ctcagctccccgtccagcatcagctgcagcagcagtggggaagaagatgaaggacgtacg
tcagacccaccgagcccagattcctcagacacctaccacccccaacagaccagcaggccg
agacgcaacaacaagaacaggccaggacagagagaggacaagagcgaggccaccgtcccg
gtcactcgaccggccttcttctgcaagcactgtcccaaagaatacaacagtctcggtgcc
ctaaagatgcacatccgctcacacacactaccatgcgtctgtcccacctgtggaaaggcc
ttctctcgaccctggctgttaagaggacacattcgcacacatacaggtgagcgtccgttc
tcctgcacacactgtaaccgtgccttcgcagaccgttctaacctgcgcgcgcacctgcag
acccacgcagatgtgaagaaataccagtgcagcacctgttctcgcaccttcagccgcatg
tccttgctgcagaaacacagcgcagccggctgctgtccctccacggcctga

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