Ctenopharyngodon idella (grass carp): 127522189
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Entry
127522189 CDS
T08802
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
cide03083
Polycomb repressive complex
cide04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127522189
03083 Polycomb repressive complex
127522189
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127522189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127522189
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127522189
Histone modification proteins
HAT complexes
HATB complex
127522189
HDAC complexes
Sin3A-HDAC complex
127522189
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127522189
PRC2.2
127522189
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127522189
Heterochromatin formation proteins
Other heterochromatin formation proteins
127522189
Chromatin remodeling factors
NuRD complex
127522189
NuRF complex
127522189
NuRF complex (fruit fly)
127522189
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
DSE1_N
WD40_WDHD1_1st
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_NOL10_N
eIF2A
WD40_MABP1-WDR62_1st
ASA1
PAC11
CFAP251_N
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
NBCH_WD40
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
127522189
NCBI-ProteinID:
XP_051767801
LinkDB
All DBs
Position
11:complement(2247497..2258760)
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagaagtgtatgatgatgcagtggaggagagagtaataaatgaggaatac
aagatctggaagaaaaacacaccgttcctatacgatcttgttatgacacatgcacttgag
tggccgagtttaacggtgcagtggcttcctgatgtgaacaggcctgagggaaaggactat
gcagttcatcggctggtgctgggcacacacacttcagatgagcagaaccacttagtcatc
gccagtgttcagatccctaatgacgacgctcaatttgatgcgtcccactacgacagcgag
aaaggagcagagtttggagggtttggatcagtgagcggaaagatcgagattgagattaag
atcaaccatgaaggagaagtgaatagagccagatacatgccacaaaacccctgcatcatc
gccaccaagacccccacctctgacgtgctggtgtttgactataccaaacacccatctaaa
ccagaccccagtggagagtgtagtccagacctgagactgcggggacatcagaaggaggga
tacggtttgtcctggaaccccaacctgagtggaaacttacttagtgcatcagacgaccat
acaatctgtctgtgggacatcagtgctgttccaaaggaggggaagatagtagatgccaag
accatcttcacagggcacacagctgtggtggaggacgtgtcctggcaccttctacatgaa
tcgctgtttggctctgtggctgatgaccagaaactcatgatctgggacacacgatccaat
aacacatcaaagcccagtcactctgtggatgcccacacggccgaagtcaactgcctgtcc
ttcaacccatacagcgagttcattctggccactggctcagcagacaagactgttgcattg
tgggatctgcgtaacctgaagttgaagcttcactcttttgagtcacataaggatgaaatc
ttccaggtccagtggtctccccataacgagaccatcctggcctccagtggcacagacaga
cgcctcaatgtttgggacctgagtaaaattggagaagagcagtctgcggaggacgcagag
gacgggccacctgagctgctgttcattcatggtgggcatacagctaagatctctgatttc
tcctggaacccaaatgaaccctgggtaatctgttctgtgtcagaggacaacattatgcaa
gtatggcagatggctgaaaacatctacaatgatgaagagccagacacccccgcatcagag
ttggagggccaggcgtcataa
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