Ctenopharyngodon idella (grass carp): 127522219
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Entry
127522219 CDS
T08802
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127522219
04020 Calcium signaling pathway
127522219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127522219
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127522219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Chordopox_G3
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
127522219
NCBI-ProteinID:
XP_051767874
LinkDB
All DBs
Position
11:23745864..23893902
Genome browser
AA seq
2499 aa
AA seq
DB search
MLSPMYADSSVIMERAPSLRKGGKAQPQGYKLRCHPPTSGSSVCANPTYYHTVYDMSNEA
CQVDSFDYSKTNGGETVVTDGTLYSLMPSDSLVPPVRRRGGLVDHRDVIKAHQSHKLQST
PQARRKQWEMARFGDEVPARYGGGGSVQGGPGRGGSRQGGPPGAQRMYKQSMAQRARTMA
LYNPIPVRQNCLTVNRSLFLFSEDNIIRKYAKKITEWPPFEWMILTTIIANCIVLALEQH
LPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRNGWNVMDFVVVLTG
ILSSVGSELDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGVLLFVAILMF
AIIGLEFYMGKFHRTCYDNVTHEIVDEQPCGELYPARVCEEGTCMEYWIGPNYGITQFDN
VLFAVLTVFQCITMEGWTDMLYYSNDALGSAWNWMYYVPLIIIGSFFMLNLVLGVLSGEF
AKERERVENRSEFLKLKRQQQIERELNGYLEWICKAEEVILAEDDNGPGDRSRRRPTLKK
NKADLLNPEEGEDHMGDTVGSPFARASIKSGMGDGTPFSKKERRLRFLIRKMVKTQAFYW
TVLSLVGLNTLCVAVVHYDQPELLSDFLYYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSF
NCFDCTVIVGSIFEVFWAMIKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSM
KSIISLLFLLFLFIVVFALLGMQLFGGQFNFEQGTPPTNFDTFPAAIMTVFQILTGEDWN
VVMYDGIESQGGVDKGMIFSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEE
EATSQKIALQKAKEVAEVSPLSAANLSIAAVTVKSERIDATDSLLDCKEQQKNSKGSKSV
WEQRTSEIRRQNLMTSREALYNELDAEDHWKMNYRNRPDMKTHLDRPLVVNPQENRNNNT
NKPRPGEPNPQELNQQRGEEYLQHQPRYHHHHSHHHHHHHHTHSSRQSLHHPDLGETGCE
YAQRGGEDVEGTGEHRRPRHHQHRRRDEDGGERGRRHREHHSRGETGGDGEEGQEKRQRR
HRHGNHGDGDGRRDRERSRQHQARKEASLSTARPIQPGLPHTESQYSEDLDNLRNSSKMA
IHDPDPDLYDPYCDPEQANNLLNLRGPDFHDSSLILTDSTKTPSKLDHTAIDMPPIYPSF
NAKLQVNKNANTEPAKEGEKKEEEEDNGGDEDGPKPIPPFSSCFILSTTNPFRRCCHYIL
TLRYFEMCILSVIAMSSIALAAEDPVSPESPRNNVLRYFDYVFTGVFTFEMLIKMVVLGL
VLHEGSYFRDLWNFLDFVVVSGALVAFAFTGSSKGKDISIIKSLRVLRVLRPLKTIKRLP
KLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFARDCRGEY
LVYERDNEVKSQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDSTYEDQGPS
PGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAIN
AKPLTRHMPQNKQSFQYRMWQFVVSPPFEYSIMALIALNTVVLMMKYHGASDAYDKVLKN
LNIVFTTLFFMECVLKIIAFGAQNYFRDAWNIFDFVSVIGSITDILVTELGDSFINLSFL
RLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIAILFFIYAIIGMQLFGNLKLD
DETAVNVHNNFRTFIMALMLLFRSATGEAWHEIMLACLGGKDCDEKSGNEGPECGSNFAY
AYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIH
YKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIK
IAKGGADKHQMDAELRKEMMAIWPNLSQKNLDLLVTPHKSATDLTVGKIYAAMMIMEYYR
QSKAKKLQALREEQNRTPLMFQRLEPSPNQEGGPGVNGLPELPQEPVNSLPPEGGMSESQ
SWVTSRAQEMFQKSVPENWNPDRPYPDDHHDSRHNPQTVEMREIGPVGDGYSDTEPYHPM
EGHGRTISMPRLSADNQRRRHRPRGSNLSTITDTSPMRRSTSSLVHGRSGRGVRLDDYSL
ERVVSEEGHRHGPRRRERDRDRERDRSHRTSERSLARYTDADTGLGTDLSTTTQSGELPP
KERERERGRAKDRRHHHHHHHHHSSVDKERYGHERDYHRHPHDRSDRQWSRSPSEGRGHR
QGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPSTPRPHVTYSPAVRKPPYGSPGQGRLRSP
SPRHFSPPGHEPPYHLPPSRHASPHHGSPRHASPRSPRHSSPRSPRHGRWGPPPDSLEGD
GPFYDRDYEYERHHEPPAYEQSLSQGNPHPHPHPHPRSPRTARHGPPSHPRRMPNGYRSS
SPSPHRRGPHPGPHRPPHGRGPRKGLHEQYSETDEDDWC
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcccatgtatgcagacagctcagtcatcatggagagagcgccgtccttgcgg
aagggagggaaagcgcagccacagggttacaaattgcgctgtcatcctcctaccagcggg
agcagtgtttgtgccaaccccacatactatcatacagtgtatgacatgagtaatgaagca
tgccaagttgactccttcgactacagcaaaacaaatggaggggaaaccgtggtgacggat
gggacactttactctttgatgcccagtgactctctggttcctcctgtcagaaggagagga
ggcctagtggaccaccgtgatgtcatcaaagcccaccagtcccataaattgcagagcact
ccacaagcccgacgaaaacaatgggaaatggctcggttcggagacgaagtgccggccagg
tacggcggcgggggctccgttcaggggggacccggccgcggcggcagcaggcagggcggc
ccgccaggggcccagaggatgtacaagcaatcgatggcccagagagcccggaccatggcc
ctctacaacccgatcccggtccgacagaactgcctgacggtcaaccgctctctgtttctc
ttcagtgaagacaacataatccgaaaatacgccaaaaagatcaccgaatggcctccattt
gagtggatgattttgaccaccatcattgccaactgcatcgtactggctcttgaacaacac
ttaccagatggagacaaaactccactgtcagaacgactggatgacacagagccctatttc
attgctattttctgttttgagtcgggcattaagattcttgcgctgggatttgccttccac
aagggctcctacctgagaaacggctggaacgtgatggactttgtagtggtgctcacgggt
atcctgtcctccgtggggtcagaattagacctgcggacattgcgagcagtcagagtgttg
cggccgctaaaattggtgtcaggaattccaagcctgcaggtggtgctgaagtccatcatg
aaggccatgattccacttctgcaaattggcgtgctcttatttgtggccatccttatgttt
gccattattggcctggagttctacatgggcaaattccatcgcacatgctacgacaatgtc
acacatgagattgttgatgaacagccctgtggtgagctttatcctgctcgagtgtgtgaa
gaagggacatgtatggaatattggatcgggccaaactatggcatcacacagttcgacaac
gtcctttttgccgtgctcactgttttccagtgcatcaccatggagggctggactgatatg
ctttattacagcaatgatgccttagggagtgcctggaactggatgtactatgttcccctt
atcatcataggatccttctttatgcttaatctggtgttgggtgtcctctcaggtgagttt
gccaaagaaagagagcgtgtggagaacaggagcgagttcctgaagctcaaacgtcagcag
cagatagagagagaactcaatggatatctggagtggatctgcaaagcagaagaggtcata
ctcgctgaggatgacaatggccccggtgacagatctcgtcgcaggcccacgttaaagaaa
aacaaagctgacctgttaaatccagaagaaggagaggaccatatgggagacacagttggc
tcgccttttgctcgtgcgagcataaagagcggaatgggtgatggaactccgtttagcaag
aaagaacgccgtcttcgcttcttaattcgaaaaatggtaaagactcaggcgttctactgg
acagtccttagcctggtgggactcaacacactgtgcgtggccgtcgtacactacgatcag
cctgagctactgtcagatttcctctattatgctgagttcattttcctaggcctctttatg
tcagagatgctgattaagatgtacggactggggacgcgcccttatttccactcctcattc
aactgtttcgactgtactgtcatcgttggcagcatatttgaggtgttctgggccatgata
aagccagggacgtcctttggaatcagcgtgttaagagctctccgactgcttaggatcttc
aaagtcaccaaatactgggcatctttgcgtaatcttgtagtgtctcttctgaactccatg
aagtccattatcagtttacttttccttctcttcctcttcatcgtggtctttgctcttctc
ggcatgcagctatttggtggacagtttaactttgagcaaggcactcctcccacaaacttt
gatactttccctgctgccattatgacagtgtttcagattctaacaggagaggattggaac
gtggtgatgtatgatggtattgagtctcagggaggggtggataaaggaatgatcttctcc
gtattcttcattgtcctcacactctttggcaactacacactactgaatgtatttttggct
atcgctgtggacaacctggccaatgctcaggaactaactaaggatgaacaagaggaagag
gaggccacatcacaaaagattgctctccagaaagcgaaagaagtggcagaagtgagccca
ctgtctgctgccaacctctctattgctgcagttacagtaaaatctgaacgtatcgatgcc
acagacagtttactggactgtaaagagcagcagaagaactcgaaaggttctaagtcggtg
tgggaacagcgcacaagcgagattcgcagacagaacctgatgaccagcagagaggcactt
tacaatgaacttgatgcagaagatcactggaagatgaactaccgcaaccgtcctgacatg
aagacccacttggaccgcccactagttgttaatcctcaggagaaccgcaacaacaatacc
aacaagccccgaccgggtgaaccaaacccccaggagctgaaccagcagaggggtgaagaa
tacctgcagcaccagccccgataccatcaccatcacagtcatcatcatcaccaccaccat
catacccactccagccgccagtccctacaccacccagacctgggtgagacagggtgcgaa
tatgcccagagaggaggcgaggacgtggagggcacaggggaacacaggcgaccccgacac
caccagcacagaaggagggatgaagatggaggagaaagaggaagaagacacagagaacac
cacagcagaggagagacaggaggagatggggaggagggccaagagaagaggcagaggagg
catcgccatggaaaccatggggatggagatggaaggagggatagggaacggagtcgacag
catcaagctagaaaagaggctagtttgtcgacggctcgtccaattcagccaggtcttcca
cacacggagagccagtacagtgaggatctagacaacctgcgaaacagtagcaagatggcc
atccatgaccctgatcccgatctttatgacccctactgtgacccagagcaggccaataac
ctgctgaacctgcgaggaccagatttccatgacagcagtctcattctgacagactccacc
aaaacccccagcaaactcgaccacactgccatagatatgcccccgatttacccctcattc
aacgccaagttacaagtgaacaaaaatgccaacacagagccagctaaagaaggagagaag
aaagaagaggaggaagacaatggtggtgacgaagacggacccaaacccattcccccattt
agttcatgtttcattctatccacaaccaacccgttccggagatgctgtcactacatactg
acgctacgttatttcgagatgtgtattctgtcagtcatcgctatgagcagtattgcatta
gcggctgaagatcccgtgtctccagaatcacctcgaaacaacgttttgcgttactttgac
tatgtattcactggtgtgtttacctttgagatgctcatcaagatggttgtgttaggcttg
gttttgcatgagggctcatattttcgtgacctctggaactttctggactttgtagtggtt
agtggtgccctggtagcctttgccttcacagggagcagtaaggggaaagatatcagtatc
atcaagtctctgagggtcctaagggtgctacgtccactcaagaccatcaaacgtcttccc
aaactaaaagcggtgtttgactgtgtagtaaactctctgaagaacgtgttgaacatcctc
attgtctacatgctgttcatgttcatctttgctgtggtggccgtgcagctctttaaggga
cgattcttctactgcaccgacgagtccaaagagttcgcccgtgattgcaggggcgagtat
ttggtgtatgagcgtgataatgaggtcaaatcacagaagcgggagtggaagaagtacgat
ttccactacgacaacgtgctttgggccctgctaactctctttactgtgtccactggagag
ggatggccgcaggtgttgaaacattcagtggacagcacttatgaggaccagggcccgagc
ccggggtaccggatggaaatgtccatcttttacgtggtgtacttcgttgtcttccccttc
ttcttcgtaaacatctttgtagctctcatcatcatcactttccaggagcaaggagacaag
atgatggaggactacagcctcgaaaagaatgagagagcctgtattgattttgctataaat
gccaaacctctaacgcgccacatgcctcagaacaagcaaagctttcagtaccgaatgtgg
cagtttgtggtgtcgcctccgtttgagtacagtatcatggctctcattgcgctcaacaca
gtcgtccttatgatgaagtaccacggggcttccgatgcgtatgataaagtcctgaagaac
ctgaatattgtattcacgacactcttcttcatggagtgtgttctgaaaatcatcgccttt
ggtgcccagaattatttcagagacgcttggaatatttttgattttgtgtccgttatcggc
agcatcacagatattttagtgacagagctaggggatagcttcattaacctgagttttctg
agactcttccgagcagcacgtctcattaagctcttgaggcagggcgagacaattcgcatt
ctgctttggaccttcgttcagtcatttaaggctctgccatatgtgtgcctgctcattgca
attctgttcttcatctatgctatcattggcatgcagttgtttgggaacttgaagctggat
gatgagactgcagtcaacgtacacaacaacttcagaaccttcatcatggccctgatgctc
ctcttcaggagtgccactggtgaggcatggcacgagatcatgctggcatgtctcggagga
aaggattgtgatgagaagtctgggaacgaggggccagagtgcggcagcaactttgcctat
gcctattttgtttctttcatcttcctctgttctttcctgatgctgaatctcttcgtcgct
gtcatcatggataactttgagtacttgaccagggactcctccatcctgggtccacatcat
ttggatgagtatgtcaggatatgggcagagtacgacccagcagcctgcgggcgcattcat
tataaggatatgtacagtttattgcgggttatcgaccccccgctgggcttaggcaagaaa
tgtcctcatagggtggcctgcaagagactgctacgtatggacttacctgttgctgatgac
aacacggtgcatttcaactctactctgatggctttgatacgcacagctctggacatcaaa
atcgccaagggaggcgcagacaaacaccagatggacgcagagctccgtaaggaaatgatg
gcgatttggccaaatctctcccagaagaacttggatctgctggtaacgccacacaagtca
gcgacagacctgacagtgggcaagatctacgccgccatgatgataatggagtactaccgg
cagagcaaggccaaaaagctgcaagcgcttcgtgaggagcagaaccgaacgccattaatg
tttcagcgcttggagccatccccgaaccaggaagggggaccgggggtgaacggtctcccc
gagttgccgcaggaacctgtcaacagcctgcctccagagggtggaatgagtgagagccag
tcttgggtgacgtcacgtgcccaggaaatgttccagaagtctgttccggaaaactggaac
cctgacagaccgtatcctgatgaccatcacgacagccgccataatccacagacggtagaa
atgagagagattgggcctgttggggacggttactcggacactgagccctatcacccaatg
gaagggcatgggcggaccatctccatgccacgcctctcagcagacaaccaacgacggaga
cacaggccgcgaggaagtaacctcagtaccatcaccgacacaagtccaatgcgccgttct
acatcctcattggtccacggacgttctggtcgaggcgtgagattggacgattactctctg
gagagggtggtgtcagaggagggtcaccgacacggtccgagaaggagagagcgtgatcga
gaccgggagagagaccgcagtcaccgcacctcggagagatccctcgctcgctatacagac
gcagacacaggtctgggcacagatcttagcaccactacacagtcaggtgaactcccacct
aaagagagagaacgagaacggggtcgagcaaaagaccgtcgccaccaccatcatcatcat
caccaccacagctcggtggataaagaacggtacggtcatgagcgcgactaccaccgtcat
cctcacgacagatctgatcgtcagtggtcccgctcaccgagtgaggggagagggcacaga
cagggcagtagttctgtgagcggaagccccgttccctcgacgtcggggaccagcaccccc
cggcgtggccgtcggcagttgccccagaccccgtccacacctcgccctcatgtcacctac
tccccagccgtccgcaagcctccctacggctccccgggccagggtcgactccgctcccct
tccccgcgacacttctctccaccaggtcatgaaccgccctaccaccttccaccctctcgc
cacgcctcgccccatcacggctcgccccggcacgcctccccgcgctcccccaggcactcg
tcgcccaggtccccacgtcacggccgctggggcccgccgccagacagcctagagggcgac
ggaccgttctacgatcgggactatgagtacgagcggcaccacgagccacctgcctacgag
cagagtctatcgcagggcaacccccaccctcatcctcacccgcacccccggtccccaagg
actgctcgtcacgggcctccctcgcacccgcgccgtatgccgaacggctaccgttcctcc
tcgccctccccgcaccggcgcggcccccacccaggcccacaccggccaccacatggccgt
gggccccggaaggggttgcacgaacaatatagcgagacggacgaggatgattggtgttag
DBGET
integrated database retrieval system
