KEGG   Ctenopharyngodon idella (grass carp): 127522226
Entry
127522226         CDS       T08802                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1a isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127522226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127522226
   03041 Spliceosome [BR:cide03041]
    127522226
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127522226
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127522226
Spliceosome [BR:cide03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    127522226
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 zf-CCCH_6
Other DBs
NCBI-GeneID: 127522226
NCBI-ProteinID: XP_051767920
LinkDB
Position
11:3122421..3130600
AA seq 398 aa
MSKEQQTPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGF
VTYSSVGEVDAAMDARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKIFVGGIKEDTDEE
HLREYFGQFGKIEEVNIMTEKNSDKRRGFAFITFDDHDSVDRIVIQKYHTVNGHNCEVRK
ALSREEMNRVSMNPRGGRGGGGGNFGRGGGYGGGGYGGGGGGGGRGGYGGGDGGYNGYGG
NGGYGGGGPNYGGNRGYGGGGGGGGGYGNQGGGYGGGGGGYDNYNNGGGGNFGGGNFGGG
GGGDYNDFGNYNQSSSNYGPMKGGNYGGGGRSGGGGPYGDAIKFQQQAICPSTADETQLQ
DMTKSVKNHSQSEELVWAELFQQAHCTRTLSNSNVTLF
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgtccaaagagcaacagaccccccgtgagcctgagcagctccgaaagctctttatcggg
ggtctcagtttcgagacaacagatgagagtctaagggcccatttcgagcaatggggaact
cttacagactgtgtggtgatgagggaccccaacacaaagaggtcgaggggttttgggttt
gtgacctacagttcggtaggtgaggtggatgcagcgatggacgctcgtccgcacaaagtg
gatggaagagctgttgaacccaagagggcagtttctagagaagactcgtccaaaccaggc
gctcactccactgttaaaaagatttttgtgggcggaatcaaagaagacacggatgaggaa
cacttgcgggaatatttcggccagtttggtaaaattgaagaagtgaacatcatgacagag
aagaacagtgataagaggaggggtttcgccttcataacatttgatgaccatgactctgtt
gacaggattgtcattcagaagtaccatacggtgaatggacacaactgtgaagtcaggaaa
gctctgtccagagaggaaatgaacagagtctcaatgaatccacgaggtgggcgagggggt
ggtggcggaaactttggcagaggaggtggatatggaggaggtggctatggaggaggagga
ggcggtggaggaagaggaggttatggaggaggtgatggtggatataatggctacggaggg
aatggcggctatggtggaggcggacctaattatggtggtaaccgcggttatggaggtggc
ggcggcggcggtggtggctatggaaaccagggtggaggctatggtggcggcggtggcggc
tatgataactacaacaatggtggtggaggcaactttggaggaggcaactttggaggtgga
ggtggtggagactacaatgactttggcaactacaaccagtcttcctctaactatggccca
atgaagggaggaaactacggaggtggtggaaggagcggcggcggtggcccatatggtgat
gcgataaaattccagcaacaggcaatttgtccgtctacagcagacgagacgcaactacag
gacatgacaaaatcagtcaaaaatcacagccaatcagaagaattggtgtgggcggagctc
tttcagcaagcgcactgcactcgcacattatcaaattcaaatgttacattattttag

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