Ctenopharyngodon idella (grass carp): 127522289
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Entry
127522289 CDS
T08802
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127522289
03037 Cilium and associated proteins [BR:
cide03037
]
127522289
Transporters [BR:
cide02000
]
Other transporters
Pores ion channels [TC:
1
]
127522289
Cilium and associated proteins [BR:
cide03037
]
Other cilia and associated proteins
Stereociliary proteins
127522289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Promethin
TADA2A-like_3rd
Motif
Other DBs
NCBI-GeneID:
127522289
NCBI-ProteinID:
XP_051768045
LinkDB
All DBs
Position
11:17754809..17773015
Genome browser
AA seq
831 aa
AA seq
DB search
MAGRVNFYSDLVTDIESPADEDGVHDSFTQLIEEQCHDLHDLQHDFHDVIEMTSLDPEEE
SRDDVLHLEGPAYHRSDSEVPQQTDHLIGERWSSDTLKVLSSMPSRTIGRSRGAIISQYY
NRTMQLRRRRQSRPSIQHFPRSARPSIRGYRMETDGDDFEVEEDNKRERLVNNLQNLSAN
DRVRMLRAMPLSLAEKKELRMLVLNKAAHSLSQSQIPCCSQLKYYIIIALRQGWYGWMSF
LSSLQLWQTALKCVGGHFGTGVLSYFVFLRTLLFFNVFLFLVTGLFLVVPQAVLLDRDQS
TSVRSTWGLEVLTGTGYFSDSLLYYGYYSNHTLQTDRSCSKSMNRTSCGSGLSYNMPLVY
FFIIGAAFFVTCIILVYSMSKSFGQSFRIDKSKGLLAIKVFSSWDFKVSKKSSVGLQRAN
IGTQLKELVAEVNRKELKFSALQRLWRLFIHMLAWILCLGSTLGCMLAVYYFSEHMHKKD
VKIRSSSYPNTSSSDSLLLKEASLLAVPVIMSSINLLLPGFFNAVAWMEQYDSPSVLNYV
SISRNLLLKVSVLGVLCYHWLGRVASDPKSLGLQCWESFVGQELYRFLVMDFIFMLLDTF
FGEFLWRVFSQKALKRKRKPVFDIARNVLELIYGQTLAWLGVLFSPLLPVVQIIKLLFLF
YMKKVSLMMNCQASGKPWRASQMTTIFITLLCFPSFLGAAVCVTYTMWTMKPSDGCGPFR
GLKTMFQAGKQWVQQLADANPKLSWLALAHTYLVENPLFLFLCAGIFLIVIYFHSQVVDG
QRKIIDLLQEQIENEGEDKKFLITRLQDIHERKRVVSPRRVREASEDSSFS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagggtcaatttttactcggacctggtcactgatatagaaagtccagctgat
gaagatggggttcatgattcattcactcagctgattgaggagcagtgtcatgaccttcat
gaccttcaacatgattttcatgatgtcatagagatgacctcgctggacccggaggaggag
agcagagatgacgtcttgcatctggagggtccagcgtaccatcggtctgacagcgaggtg
ccgcagcagacagatcatttgattggagaacgctggtcatctgacacgctcaaagtcctg
tcctcgatgcccagccgcaccatcggtcgcagtcgaggagcgatcatctctcagtattac
aaccgcaccatgcagctgcgcagacgcaggcagagcagaccctccatacaacacttccct
cggtctgcacgtcccagcatccgcggttaccgcatggaaacggacggagacgattttgag
gtggaagaagataataagagggagcgtttagtgaataatctgcagaatctgtcagcgaat
gatcgtgtgcgcatgttgagagcgatgccactgagtctcgcagagaagaaagagctcagg
atgttggtgttgaataaagccgcacactctctgtctcagagtcagattccctgctgcagt
cagctcaagtattacatcatcattgcgctgagacagggatggtacggctggatgtcgttc
ctgtcctcgctgcagttgtggcaaacggctctgaagtgtgtcggcggtcacttcgggacg
ggcgttctgtcgtatttcgtcttcctcagaacgctcctcttcttcaacgtcttcctgttc
ctggtcacgggtctgtttctggtggttcctcaggccgtgcttctggatcgggaccagagc
actagcgtcagaagcacctgggggctggaggtgctgacgggcactggttatttctcagac
tctctgctgtattacggttactacagtaaccacacactacagacggaccgcagctgttct
aagtccatgaacaggacgtcctgtgggtctggactgtcctataacatgcctctcgtttac
ttcttcatcatcggcgcggccttcttcgtcacctgcatcatcctcgtctacagcatgtcc
aagtccttcggtcagagttttcgcatcgataaatctaaaggcctgttggccataaaggtg
ttcagctcgtgggactttaaagtcagcaagaaatcctccgtgggactccagcgagcgaac
atcggcacacagctcaaggagctggtggcagaagtcaaccgcaaagagctgaagttttcc
gctctccagcgactgtggcggctgttcatccacatgctggcatggatcttatgtttggga
agcacgctggggtgtatgctggctgtgtactacttctctgaacatatgcacaagaaagac
gtcaaaattcgttctagttcctaccctaatacgagctcgtctgacagcctgttgctgaag
gaggcgagtctgttggccgttcctgtcatcatgtccagcattaatctgctcctgccggga
ttcttcaacgccgtggcctggatggagcaatatgattctcccagcgtgctcaattacgtc
tccatcagcaggaacctgctgttgaaagtgagcgtgttgggagtgctgtgctatcattgg
ctgggccgcgtggcgtcggaccctaagagtctgggcttacagtgctgggagagtttcgtg
ggacaggaactgtaccgtttcctcgtgatggacttcatcttcatgctgctggacactttc
tttggagagtttctgtggagggtgttttctcagaaagctctgaagaggaagaggaaaccc
gtgtttgatatcgcgcggaacgttctggagctcatctatggacaaactctggcctggttg
ggcgtgttgttctcacctctcctgcctgtggttcagatcattaaactgctgtttctcttc
tacatgaagaaggtcagtctgatgatgaactgtcaggcgtcagggaagccgtggcgcgcc
tctcagatgaccaccatcttcatcacgctgctgtgcttcccgtcgttcctgggcgccgcc
gtgtgtgtgacgtacaccatgtggacgatgaagccgtcggacggctgcggtccgttccgc
ggtctgaagaccatgttccaggccgggaagcagtgggtgcagcagctggcggatgcgaac
cccaaactgtcctggctcgccttggctcacacgtacctggtggagaacccgctcttcctc
ttcctgtgcgccggcatcttcctgatagtgatttacttccacagtcaggtggtcgacggt
cagcggaagatcattgatctccttcaggaacagattgagaacgagggcgaggataagaag
tttctcatcacgcgactgcaggacatccatgaacggaagcgtgtcgtctcaccgcgccgc
gtgcgagaagccagcgaggattccagtttttcctga
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