Ctenopharyngodon idella (grass carp): 127522349
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Entry
127522349 CDS
T08802
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04517
IgSF CAM signaling
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127522349
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127522349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127522349
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127522349
Intermediate filaments
Intermediate filament-binding proteins
127522349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
PMC2NT
Motif
Other DBs
NCBI-GeneID:
127522349
NCBI-ProteinID:
XP_051768156
LinkDB
All DBs
Position
11:18368190..18459920
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEFDHMDIQQTYQDSVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDRLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAV
VAVAKELEAENYHDIKRITARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQKFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERIAD
VQAQWAALEQLAAVRKTRLEEACSLHQFQADADDVDAWTLDALRIVSTADVGHDEFSTQA
LVRKHKDASSEVASYRPVIDALHEQAQSLPPELAQTANVNERLAGIEERYKEVSELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHNGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADR
LAGEHPDQAKAITGRLAEITAVWEEMKDTLRNREASLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINADRIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEAKQLVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCLFDANK
AELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRIEVEQKFQELLEPLLKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSILKADSPNVES
IRARLTDLQQLWSLIIQETEKRHTRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRARLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERKRKPPT
PEPVQAQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVAERSSKEPSPIPSPTADR
RGKGSQSATLPAKGQETPSAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYK
DNKSAAQGIPYHNEIPISLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTW
IQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaattcgaccacatggacatccagcagacataccaggacagt
gtcaacaaccgctgggaggacgaatgggacaatgagaacagctcggcgcgattattcgag
cgctctcgcatcaaggctctggctgatgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactcacacctggcgcgcgtgtcgtgtcggatcacggatctgtacatggac
ctgcgagatggacggatgctcatcaagctgctggaggtgttgtccggagagagactgccc
aagccaacgaagggccgcatgcgtatccactgcctggagaacgtggacaaagccctgcag
ttcctcaaggagcagcgggtgcacctggagaacatgggatcacatgacatcgtcgatggc
aaccaccgactcacgctcggactcatttggaccatcatcctccgcttccagatccaagac
atcagcgtggagacagaagacaataaagagaaacgctcagccaaggacgccctgctgctg
tggtgccagatgaagaccgcgggctatccgaacgtcaacatccacaacttcaccaccagc
tggcgtgatggaatggcgttcaatgccctcattcacaaacacaggccagacctgattgat
ttcgacagactgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggcc
gagcagcacctgggtctcaccaaacttctggacccagaagatatcagcgtagaccatccc
gatgagaagtccgtcatcacttatgtcgtcacatactaccattatttctccaagatgaag
gccttgaaggtggagggcaaacgtatcggaaaggtgcttgacaacgccatcgagactgag
aagatgatcgagaaatatgaatctctggcgtccgatctgctggagtggattgaacaaacc
atcatcatcctcaacaaccgcaagtttgcaaactcactggttggagtccagcagcagctt
caggccttcaacacctaccggacagtggagaaaccgcccaaattcactgagaagggcaac
ctggaggtgcttctgtttactatccaaagcaagatgagggccaataaccagaaggtgtac
atgccccgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggaaaag
gctgagcacgagcgcgagctggcgttgaggaccgagctgatccgacaggagaagctggag
cagctcgccagacgcttcgaccgcaaggccgccatgagggagacctggctgagcgagaac
cagcgcctcgtttcccaggacaattttggattcgacctccaggcggttgaggcagctacc
aaaaaacacgaagccatcgagacagatattgcagcgtacgaggagcgcgtgctggcggtg
gtcgccgtggccaaagaactggaggccgagaactaccacgacatcaagcgaatcacggct
cgcaaagacaacgtgctgcgcctgtgggagtatctgctggagctgctcaaagctcgccgg
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggatgaaatgaagatgctgctgctgtctcaggattatgggaagcacttgctt
ggggtggaagatctgctgcagaaacacgctctggtggaggccgacatcggcatacaggcc
gaccgcgtcaaagccgtcaacgccaacgcacagaagtttgccgtggacgaggagggctac
aaaccctgtgaccctcaggtcatccgtgaccgcgtggcccacatggagttctgctaccag
gaactgacccagctcgcagccgagcgccgcgcccgcctcgaagagtcccgccgcctttgg
aagttcttctgggagatggccgaggaagagggctggattcgcgagaaagagcagatcctg
tcctcggacgactgcggtaaggatctgacgggcgccgtccgcctgttgagtcaacatcgc
gccctcgaagatgaaatgagtggccgcgccggtcacctccagcacacagtgcgcgaaggt
caagcgatggccgacgctgggcatttcggtgaagccaagatccgtgagcgtattgcagat
gtccaagctcagtgggccgctctggaacagctggcagcggtgaggaaaacccgcttggaa
gaagcctgcagccttcaccagttccaggccgacgcggacgatgttgacgcctggactttg
gacgcgctccgaatcgtctccaccgctgacgttggccatgatgaattttccactcaagct
ttggtcaggaaacacaaagacgcgtcatctgaggttgctagttatcggccagtgatcgac
gcccttcacgagcaggcgcaatcccttcctcccgaactggcgcagactgcgaacgtcaac
gagcggctggcgggcatcgaggaacgctataaggaggtttcagagttgaccaggctgagg
aaacaggccctgcaggacgccttggcgctctataagatgtttagcgaggcagatgcatgt
gaactctggatcgatgagaaagagcagtggctcaacagcatggagatcccagagaaactg
gaggaccttgaggtcattcagcacaggtttgagagtctggagcctgaaatgaataaccag
gcctcacgtgtggccgtcgtcaatcagatcgccaggcagctgatacacaacggacacccg
agcgagaaagacatcaaagcccaacaagacaaactcaacaccaggtggagtcagttccgc
gacctggtggaccagaagaaagagtccctgaactccgccttgggcgtgcagaactaccac
cttgactgtaatgagacaaaatcttggatccgtgagaagacaaaagtcatcgagtccacc
caggagctgggcaacgacctcacgggcgtaatggccctgcaacgcaaactcaccggcatg
gaacgcgatctggctgccatcgaagccaaactgggcgacctccgcggtgaggcggatcgc
ttggccggcgaacatcccgaccaggccaaagccatcacgggacggctggcggaaatcacc
gccgtttgggaggagatgaaagacacactacgaaaccgcgaggcgtctcttggcgaagcc
agcaagctgcagcagttcctccgcgagctggatgatttccagtcctggctttcccgtaca
cagacggccattgcgtccgaggacatgcccaacacgctagccgaggcggagaagcttcta
gcccaacacgaaggcatcaagaacgagattaacaactacgaagaggactaccagaagatg
agagacatgggtgagatggtgacacagggacagacggatgctcagtacatgttcctgaga
caaaggctccaggctttggatactggatggaacgagcttcacaagatgtgggagaaccgc
cagaaccttctgtcacagtctcacgcctatcagatcttcctcagagacaccaaacaagcc
gaggccttcctcaacaaccaggagtatgttctggcccataccgagatgcccaccaccctg
gaaggggcagaagctgccattaaaaaacaggaggacttcatgaccaccatggacgccaat
gaagacaagatcaacagtgtggtggaggccggtaggagacttgccagcgatggaaacatc
aacgccgaccgcatccaggagagagcaacctccatcgatgaccggcacaagaagaaccgt
gaggcggctgtggagctgctcatgaggttgaaggacaacagagacctgcagaagttcttg
caggactgccaggagctgtccctgtggatcaatgagaagatgttgacagcacaggacatg
tcctacgatgaagctcgaaacctgcacagcaaatggctcaaacatcaagctttcatggcc
gaactgcagtccaacaaagaatggctggacaaaatcgaaaaggaagcgaagcagctggtc
tcggagaagccggagacagaagctgtagtgaaggagaagttggcggcgctgcagaagatg
tggaccgaactggaaaccacaactcagactaaagcccagtgcctgtttgacgccaacaag
gccgaactcttcacacagagctgcgccgacctggacaaatggctggtgggcctggagggt
cagatccaatcagatgactatggcaaagacctgaccagcgtcaacatcctgctcaagaaa
caacagatgttggagaaccaggtggaggttcgtcagagggaggtggaggaacttcagtct
caagctcatgtgctgcgacaggaaggaaaggacacggacgaggtcgatggacgtcggatc
gaggtggagcagaagttccaggagctgctggagccgctgttgaagaggaaaaacttcctc
atggcctctcgtgagatccaccagtttaaccgtgacgtggaggatgagattctttgggtt
gaggagaggatgcctcttgctacgtcgacagaccatggcaacaatttacagactgttcag
ctacttatcaagaagaaccagacattacagaaggagatccagggccatcagcctcgctgt
gacgacatattcgagcgcagccagagcatcctgaaggccgacagccccaacgtagagtcg
atccgagcccgactgaccgacctgcagcagttgtggagcctgatcatccaggagacggag
aaacgccacaccagactcgaggaggcccataaggcccagcagtactacttcgatgcagct
gaagctgaagcctggatgagcgagcaggagctctacatgatgtctgaagagaaggccaaa
gatgagcagagttcagtggccatgctgaagaaacaccagatcttggagcaggcggtggag
gactatgctgagactgttcaccaactgtccaagacgagccgaggcctggtggccgccaac
caccctgagagtgagaggatcggcatgcgccaatcacaggtggataagctgtacgctgga
ctgaaggacctatcagaggagaggagaggcaaactggaggagaggttccgcctcttccag
ctgaaccgggaggtggacgatctggagcagtggatagccgagagagaggtggtggctgga
tctcacgagctcggccaagactacgaacacgtcactatgctgcaggaacgcttccgtgaa
ttcgcccgggacaccggaaacatcggtcaggagcgtgtggatggcgtcaaccgcatggcg
gacgagctcatcaacgctggccacgccgacgccgcgactgtcgccgagtggaaggacggt
ctgaacgaggcctgggccgatctgctggagctcatcgacacgcgtacgcagattctcgcc
gcatcctacgagctgcacaagttctaccacgacgccaaggaaatcctgggacgcatcctg
gacaagcataagaagcttccagaagagctgggccgagaccagaacacggtggaaaccttg
cagaggatgcacaccacatttgagcacgacatccaagcacttggaacgcaggtcaggcag
ttgcaggaagatgccgtgcgcctgcagtcagcatatgctggagacaaagccgacgacatc
cagcggcgtgagggcgaggtgctggaggcctggaggagtcttctggaagcctgcgagggc
cgacgggcacgactgctggataccggagacaagttccgcttcttcagtatggtgcgtgac
ctcatgctctggatggaggacgtcatccgccttatcgagactcaggagaagcccagggat
gtgtcatctgtggagcttctcatgaacaaccaccagggtatcaaagctgaaatcgatgcc
cgtaatgacagtttcacggcctgcatcgagctgggcaagtctctcctggcgcggaaacac
tatgcatcagaggagattaaagagaagttgctgcagttgacagacaagaggaaagatatg
attgacaagtgggaggacagatgggagtggctgagactgattttggaagtgcaccagttt
tcacgggacgccggcgtggcagaggcatggctgctgggacaggagccatatctgtccagc
agggagatgggacagagtgtggacgaggtggagaaactgatcaaacgacacgaagcgttc
gagaaatcagccgcgacctgggaggaacgcttctcagcgctggagcgactgactacgttg
gagttattggaagtgagaagacagcaagaggaggaagagaggaagaggaaaccgcccaca
ccggagccggtccaggcgcaggacgcagaaacacagcagagagaaggagagcagattgcc
cagaacggactaccatcagaccaggactcgccacgggatggagtggacggcgagatgaac
ggagtggccgagaggagctcgaaggagccgagtccgatcccgtcaccgaccgcagacaga
cgggggaaaggcagccagtccgcaacgctgccggctaaaggccaggagacgccgtccgcc
cagctggagggattcctgcaccgcaaacacgagtgggagggtcacaacaagaaagcgtcc
agcagatcctggcataacgtgtactgtgtcatcaataaccacgagatgggcttctacaaa
gacaataagagcgcggctcagggcatcccgtaccacaacgagatccccatcagcctgaag
gacgccgtctgcgaggtcgccgttgactacaaaaagaagaagcatgttttcaagctcaga
gttactgacggaaatgagtatctcttccaagccaaagatgatgaggagatgaacacatgg
attcaggccattcagaacgccggcagcggctcctcgtcctccgagaaatccgagatcacg
cctagcaaccagagcacgcccgcctccagccgcgcccacacgctcccggcaaccgtcacc
ctgacgaccgaatccagccccggcaagcgcgagaaagacaaggagaaggacaaagagaag
cgcttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
