Ctenopharyngodon idella (grass carp): 127522349
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Entry
127522349 CDS
T08802
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127522349
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127522349
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127522349
Intermediate filaments
Intermediate filament-binding proteins
127522349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
SOS1_NGEF_PH
PMC2NT
PH_13
Motif
Other DBs
NCBI-GeneID:
127522349
NCBI-ProteinID:
XP_051768156
LinkDB
All DBs
Position
11:18368190..18459920
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEFDHMDIQQTYQDSVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDRLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAV
VAVAKELEAENYHDIKRITARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQKFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRAGHLQHTVREGQAMADAGHFGEAKIRERIAD
VQAQWAALEQLAAVRKTRLEEACSLHQFQADADDVDAWTLDALRIVSTADVGHDEFSTQA
LVRKHKDASSEVASYRPVIDALHEQAQSLPPELAQTANVNERLAGIEERYKEVSELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHNGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADR
LAGEHPDQAKAITGRLAEITAVWEEMKDTLRNREASLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINADRIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEAKQLVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCLFDANK
AELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRIEVEQKFQELLEPLLKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSILKADSPNVES
IRARLTDLQQLWSLIIQETEKRHTRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRARLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERKRKPPT
PEPVQAQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVAERSSKEPSPIPSPTADR
RGKGSQSATLPAKGQETPSAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYK
DNKSAAQGIPYHNEIPISLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTW
IQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaattcgaccacatggacatccagcagacataccaggacagt
gtcaacaaccgctgggaggacgaatgggacaatgagaacagctcggcgcgattattcgag
cgctctcgcatcaaggctctggctgatgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactcacacctggcgcgcgtgtcgtgtcggatcacggatctgtacatggac
ctgcgagatggacggatgctcatcaagctgctggaggtgttgtccggagagagactgccc
aagccaacgaagggccgcatgcgtatccactgcctggagaacgtggacaaagccctgcag
ttcctcaaggagcagcgggtgcacctggagaacatgggatcacatgacatcgtcgatggc
aaccaccgactcacgctcggactcatttggaccatcatcctccgcttccagatccaagac
atcagcgtggagacagaagacaataaagagaaacgctcagccaaggacgccctgctgctg
tggtgccagatgaagaccgcgggctatccgaacgtcaacatccacaacttcaccaccagc
tggcgtgatggaatggcgttcaatgccctcattcacaaacacaggccagacctgattgat
ttcgacagactgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggcc
gagcagcacctgggtctcaccaaacttctggacccagaagatatcagcgtagaccatccc
gatgagaagtccgtcatcacttatgtcgtcacatactaccattatttctccaagatgaag
gccttgaaggtggagggcaaacgtatcggaaaggtgcttgacaacgccatcgagactgag
aagatgatcgagaaatatgaatctctggcgtccgatctgctggagtggattgaacaaacc
atcatcatcctcaacaaccgcaagtttgcaaactcactggttggagtccagcagcagctt
caggccttcaacacctaccggacagtggagaaaccgcccaaattcactgagaagggcaac
ctggaggtgcttctgtttactatccaaagcaagatgagggccaataaccagaaggtgtac
atgccccgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggaaaag
gctgagcacgagcgcgagctggcgttgaggaccgagctgatccgacaggagaagctggag
cagctcgccagacgcttcgaccgcaaggccgccatgagggagacctggctgagcgagaac
cagcgcctcgtttcccaggacaattttggattcgacctccaggcggttgaggcagctacc
aaaaaacacgaagccatcgagacagatattgcagcgtacgaggagcgcgtgctggcggtg
gtcgccgtggccaaagaactggaggccgagaactaccacgacatcaagcgaatcacggct
cgcaaagacaacgtgctgcgcctgtgggagtatctgctggagctgctcaaagctcgccgg
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggatgaaatgaagatgctgctgctgtctcaggattatgggaagcacttgctt
ggggtggaagatctgctgcagaaacacgctctggtggaggccgacatcggcatacaggcc
gaccgcgtcaaagccgtcaacgccaacgcacagaagtttgccgtggacgaggagggctac
aaaccctgtgaccctcaggtcatccgtgaccgcgtggcccacatggagttctgctaccag
gaactgacccagctcgcagccgagcgccgcgcccgcctcgaagagtcccgccgcctttgg
aagttcttctgggagatggccgaggaagagggctggattcgcgagaaagagcagatcctg
tcctcggacgactgcggtaaggatctgacgggcgccgtccgcctgttgagtcaacatcgc
gccctcgaagatgaaatgagtggccgcgccggtcacctccagcacacagtgcgcgaaggt
caagcgatggccgacgctgggcatttcggtgaagccaagatccgtgagcgtattgcagat
gtccaagctcagtgggccgctctggaacagctggcagcggtgaggaaaacccgcttggaa
gaagcctgcagccttcaccagttccaggccgacgcggacgatgttgacgcctggactttg
gacgcgctccgaatcgtctccaccgctgacgttggccatgatgaattttccactcaagct
ttggtcaggaaacacaaagacgcgtcatctgaggttgctagttatcggccagtgatcgac
gcccttcacgagcaggcgcaatcccttcctcccgaactggcgcagactgcgaacgtcaac
gagcggctggcgggcatcgaggaacgctataaggaggtttcagagttgaccaggctgagg
aaacaggccctgcaggacgccttggcgctctataagatgtttagcgaggcagatgcatgt
gaactctggatcgatgagaaagagcagtggctcaacagcatggagatcccagagaaactg
gaggaccttgaggtcattcagcacaggtttgagagtctggagcctgaaatgaataaccag
gcctcacgtgtggccgtcgtcaatcagatcgccaggcagctgatacacaacggacacccg
agcgagaaagacatcaaagcccaacaagacaaactcaacaccaggtggagtcagttccgc
gacctggtggaccagaagaaagagtccctgaactccgccttgggcgtgcagaactaccac
cttgactgtaatgagacaaaatcttggatccgtgagaagacaaaagtcatcgagtccacc
caggagctgggcaacgacctcacgggcgtaatggccctgcaacgcaaactcaccggcatg
gaacgcgatctggctgccatcgaagccaaactgggcgacctccgcggtgaggcggatcgc
ttggccggcgaacatcccgaccaggccaaagccatcacgggacggctggcggaaatcacc
gccgtttgggaggagatgaaagacacactacgaaaccgcgaggcgtctcttggcgaagcc
agcaagctgcagcagttcctccgcgagctggatgatttccagtcctggctttcccgtaca
cagacggccattgcgtccgaggacatgcccaacacgctagccgaggcggagaagcttcta
gcccaacacgaaggcatcaagaacgagattaacaactacgaagaggactaccagaagatg
agagacatgggtgagatggtgacacagggacagacggatgctcagtacatgttcctgaga
caaaggctccaggctttggatactggatggaacgagcttcacaagatgtgggagaaccgc
cagaaccttctgtcacagtctcacgcctatcagatcttcctcagagacaccaaacaagcc
gaggccttcctcaacaaccaggagtatgttctggcccataccgagatgcccaccaccctg
gaaggggcagaagctgccattaaaaaacaggaggacttcatgaccaccatggacgccaat
gaagacaagatcaacagtgtggtggaggccggtaggagacttgccagcgatggaaacatc
aacgccgaccgcatccaggagagagcaacctccatcgatgaccggcacaagaagaaccgt
gaggcggctgtggagctgctcatgaggttgaaggacaacagagacctgcagaagttcttg
caggactgccaggagctgtccctgtggatcaatgagaagatgttgacagcacaggacatg
tcctacgatgaagctcgaaacctgcacagcaaatggctcaaacatcaagctttcatggcc
gaactgcagtccaacaaagaatggctggacaaaatcgaaaaggaagcgaagcagctggtc
tcggagaagccggagacagaagctgtagtgaaggagaagttggcggcgctgcagaagatg
tggaccgaactggaaaccacaactcagactaaagcccagtgcctgtttgacgccaacaag
gccgaactcttcacacagagctgcgccgacctggacaaatggctggtgggcctggagggt
cagatccaatcagatgactatggcaaagacctgaccagcgtcaacatcctgctcaagaaa
caacagatgttggagaaccaggtggaggttcgtcagagggaggtggaggaacttcagtct
caagctcatgtgctgcgacaggaaggaaaggacacggacgaggtcgatggacgtcggatc
gaggtggagcagaagttccaggagctgctggagccgctgttgaagaggaaaaacttcctc
atggcctctcgtgagatccaccagtttaaccgtgacgtggaggatgagattctttgggtt
gaggagaggatgcctcttgctacgtcgacagaccatggcaacaatttacagactgttcag
ctacttatcaagaagaaccagacattacagaaggagatccagggccatcagcctcgctgt
gacgacatattcgagcgcagccagagcatcctgaaggccgacagccccaacgtagagtcg
atccgagcccgactgaccgacctgcagcagttgtggagcctgatcatccaggagacggag
aaacgccacaccagactcgaggaggcccataaggcccagcagtactacttcgatgcagct
gaagctgaagcctggatgagcgagcaggagctctacatgatgtctgaagagaaggccaaa
gatgagcagagttcagtggccatgctgaagaaacaccagatcttggagcaggcggtggag
gactatgctgagactgttcaccaactgtccaagacgagccgaggcctggtggccgccaac
caccctgagagtgagaggatcggcatgcgccaatcacaggtggataagctgtacgctgga
ctgaaggacctatcagaggagaggagaggcaaactggaggagaggttccgcctcttccag
ctgaaccgggaggtggacgatctggagcagtggatagccgagagagaggtggtggctgga
tctcacgagctcggccaagactacgaacacgtcactatgctgcaggaacgcttccgtgaa
ttcgcccgggacaccggaaacatcggtcaggagcgtgtggatggcgtcaaccgcatggcg
gacgagctcatcaacgctggccacgccgacgccgcgactgtcgccgagtggaaggacggt
ctgaacgaggcctgggccgatctgctggagctcatcgacacgcgtacgcagattctcgcc
gcatcctacgagctgcacaagttctaccacgacgccaaggaaatcctgggacgcatcctg
gacaagcataagaagcttccagaagagctgggccgagaccagaacacggtggaaaccttg
cagaggatgcacaccacatttgagcacgacatccaagcacttggaacgcaggtcaggcag
ttgcaggaagatgccgtgcgcctgcagtcagcatatgctggagacaaagccgacgacatc
cagcggcgtgagggcgaggtgctggaggcctggaggagtcttctggaagcctgcgagggc
cgacgggcacgactgctggataccggagacaagttccgcttcttcagtatggtgcgtgac
ctcatgctctggatggaggacgtcatccgccttatcgagactcaggagaagcccagggat
gtgtcatctgtggagcttctcatgaacaaccaccagggtatcaaagctgaaatcgatgcc
cgtaatgacagtttcacggcctgcatcgagctgggcaagtctctcctggcgcggaaacac
tatgcatcagaggagattaaagagaagttgctgcagttgacagacaagaggaaagatatg
attgacaagtgggaggacagatgggagtggctgagactgattttggaagtgcaccagttt
tcacgggacgccggcgtggcagaggcatggctgctgggacaggagccatatctgtccagc
agggagatgggacagagtgtggacgaggtggagaaactgatcaaacgacacgaagcgttc
gagaaatcagccgcgacctgggaggaacgcttctcagcgctggagcgactgactacgttg
gagttattggaagtgagaagacagcaagaggaggaagagaggaagaggaaaccgcccaca
ccggagccggtccaggcgcaggacgcagaaacacagcagagagaaggagagcagattgcc
cagaacggactaccatcagaccaggactcgccacgggatggagtggacggcgagatgaac
ggagtggccgagaggagctcgaaggagccgagtccgatcccgtcaccgaccgcagacaga
cgggggaaaggcagccagtccgcaacgctgccggctaaaggccaggagacgccgtccgcc
cagctggagggattcctgcaccgcaaacacgagtgggagggtcacaacaagaaagcgtcc
agcagatcctggcataacgtgtactgtgtcatcaataaccacgagatgggcttctacaaa
gacaataagagcgcggctcagggcatcccgtaccacaacgagatccccatcagcctgaag
gacgccgtctgcgaggtcgccgttgactacaaaaagaagaagcatgttttcaagctcaga
gttactgacggaaatgagtatctcttccaagccaaagatgatgaggagatgaacacatgg
attcaggccattcagaacgccggcagcggctcctcgtcctccgagaaatccgagatcacg
cctagcaaccagagcacgcccgcctccagccgcgcccacacgctcccggcaaccgtcacc
ctgacgaccgaatccagccccggcaagcgcgagaaagacaaggagaaggacaaagagaag
cgcttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
